RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 Ipo7Q9EPL8 1038 aaKnown RBP17.42■□□□□ 0.38
Trim39-203ENSMUST00000113706 Zfp213E9QAW0 468 aa17.42■□□□□ 0.38
Trim39-203ENSMUST00000113706 Kcnh2O35219 1162 aa17.42■□□□□ 0.38
Trim39-203ENSMUST00000113706 MybP06876 636 aa17.42■□□□□ 0.38
Trim39-203ENSMUST00000113706 Mdh1P14152 334 aa17.42■□□□□ 0.38
Trim39-203ENSMUST00000113706 Ddx3yQ62095 658 aaKnown RBP17.42■□□□□ 0.38
Trim39-203ENSMUST00000113706 Sycp1Q62209 993 aa17.42■□□□□ 0.38
Trim39-203ENSMUST00000113706 Exoc3Q6KAR6 755 aa17.42■□□□□ 0.38
Trim39-203ENSMUST00000113706 RragaQ80X95 313 aa17.42■□□□□ 0.38
Trim39-203ENSMUST00000113706 Ttc8Q8VD72 515 aa17.42■□□□□ 0.38
Trim39-203ENSMUST00000113706 Olfr805Q8VFI4 319 aa17.42■□□□□ 0.38
Trim39-203ENSMUST00000113706 YwhabQ9CQV8 246 aaKnown RBP17.42■□□□□ 0.38
Trim39-203ENSMUST00000113706 Ccdc43Q9CR29 222 aaKnown RBP17.42■□□□□ 0.38
Trim39-203ENSMUST00000113706 Pus7B7ZNL8 666 aaKnown RBP17.41■□□□□ 0.38
Trim39-203ENSMUST00000113706 Ube3aO08759 870 aa17.41■□□□□ 0.38
Trim39-203ENSMUST00000113706 Tcp11Q01755 566 aa17.41■□□□□ 0.38
Trim39-203ENSMUST00000113706 Rufy4Q3TYX8 563 aa17.41■□□□□ 0.38
Trim39-203ENSMUST00000113706 Atp1a2Q6PIE5 1020 aa17.41■□□□□ 0.38
Trim39-203ENSMUST00000113706 Trpv1Q704Y3 839 aa17.41■□□□□ 0.38
Trim39-203ENSMUST00000113706 Vmn1r199Q8R280 367 aa17.41■□□□□ 0.38
Trim39-203ENSMUST00000113706 Rbp7Q9EPC5 134 aa17.41■□□□□ 0.38
Trim39-203ENSMUST00000113706 Klra10Q9R1G6 266 aa17.41■□□□□ 0.38
Trim39-203ENSMUST00000113706 Cyp11b2P15539 500 aa17.41■□□□□ 0.38
Trim39-203ENSMUST00000113706 Ppp1r13bQ62415 1087 aa17.41■□□□□ 0.38
Trim39-203ENSMUST00000113706 Tubb2aQ7TMM9 445 aa17.41■□□□□ 0.38
Trim39-203ENSMUST00000113706 Pgm5Q8BZF8 567 aa17.41■□□□□ 0.38
Trim39-203ENSMUST00000113706 Rtp1Q8C8C1 263 aa17.41■□□□□ 0.38
Trim39-203ENSMUST00000113706 AagabQ8R2R3 316 aa17.41■□□□□ 0.38
Trim39-203ENSMUST00000113706 Igf2bp3Q9CPN8 579 aaKnown RBP17.41■□□□□ 0.38
Trim39-203ENSMUST00000113706 Tubb2bQ9CWF2 445 aa17.41■□□□□ 0.38
Trim39-203ENSMUST00000113706 Lonp2Q9DBN5 852 aa17.41■□□□□ 0.38
Trim39-203ENSMUST00000113706 Ddx25Q9QY15 484 aa17.41■□□□□ 0.38
Trim39-203ENSMUST00000113706 Fzd9Q9R216 592 aa17.41■□□□□ 0.38
Trim39-203ENSMUST00000113706 Hebp1Q9R257 190 aa17.41■□□□□ 0.38
Trim39-203ENSMUST00000113706 Atp11aP98197 1187 aa17.4■□□□□ 0.38
Trim39-203ENSMUST00000113706 LbrQ3U9G9 626 aaKnown RBP17.4■□□□□ 0.38
Trim39-203ENSMUST00000113706 Rusc1Q8BG26 893 aa17.4■□□□□ 0.38
Trim39-203ENSMUST00000113706 Magea4F2Z493 315 aa17.4■□□□□ 0.38
Trim39-203ENSMUST00000113706 Serpinb6bO08804 377 aa17.4■□□□□ 0.38
Trim39-203ENSMUST00000113706 Pgrmc1O55022 195 aa17.4■□□□□ 0.38
Trim39-203ENSMUST00000113706 Mcl1P97287 331 aa17.4■□□□□ 0.38
Trim39-203ENSMUST00000113706 Otud5Q3U2S4 566 aa17.4■□□□□ 0.38
Trim39-203ENSMUST00000113706 Senp5Q6NXL6 749 aa17.4■□□□□ 0.38
Trim39-203ENSMUST00000113706 E2f7Q6S7F2 904 aa17.4■□□□□ 0.38
Trim39-203ENSMUST00000113706 Supt20hQ7TT00 530 aaKnown RBP17.4■□□□□ 0.38
Trim39-203ENSMUST00000113706 Maip1Q8BHE8 291 aa17.4■□□□□ 0.38
Trim39-203ENSMUST00000113706 LarsQ8BMJ2 1178 aa17.4■□□□□ 0.38
Trim39-203ENSMUST00000113706 Zswim4Q8C7B8 1101 aa17.4■□□□□ 0.38
Trim39-203ENSMUST00000113706 Klhl20Q8VCK5 604 aa17.4■□□□□ 0.38
Trim39-203ENSMUST00000113706 Mipol1Q9D9F8 279 aa17.4■□□□□ 0.38
Trim39-203ENSMUST00000113706 DohhA0A1Y7VJ29 135 aa17.4■□□□□ 0.38
Trim39-203ENSMUST00000113706 Lmod3E9QA62 571 aa17.4■□□□□ 0.38
Trim39-203ENSMUST00000113706 Rpl13P47963 211 aaKnown RBP17.4■□□□□ 0.38
Trim39-203ENSMUST00000113706 Cep112Q5PR68 954 aa17.4■□□□□ 0.38
Trim39-203ENSMUST00000113706 Gpr180Q8BPS4 441 aa17.4■□□□□ 0.38
Trim39-203ENSMUST00000113706 SucoQ8C341 1250 aa17.4■□□□□ 0.38
Trim39-203ENSMUST00000113706 Tnfrsf11aO35305 625 aa17.39■□□□□ 0.37
Trim39-203ENSMUST00000113706 Nck2O55033 380 aa17.39■□□□□ 0.37
Trim39-203ENSMUST00000113706 Magea8O89012 320 aa17.39■□□□□ 0.37
Trim39-203ENSMUST00000113706 Psmc5P62196 406 aa17.39■□□□□ 0.37
Trim39-203ENSMUST00000113706 Tcerg1lQ3B807 590 aa17.39■□□□□ 0.37
Trim39-203ENSMUST00000113706 Dcaf17Q3TUL7 519 aa17.39■□□□□ 0.37
Trim39-203ENSMUST00000113706 Agxt2Q3UEG6 513 aa17.39■□□□□ 0.37
Trim39-203ENSMUST00000113706 Sec31aQ3UPL0 1230 aaKnown RBP17.39■□□□□ 0.37
Trim39-203ENSMUST00000113706 GapdhsQ64467 440 aa17.39■□□□□ 0.37
Trim39-203ENSMUST00000113706 Nxf1Q99JX7 618 aaKnown RBP17.39■□□□□ 0.37
Trim39-203ENSMUST00000113706 Zcchc17Q9ESX4 241 aaKnown RBP17.39■□□□□ 0.37
Trim39-203ENSMUST00000113706 Ttll12Q3UDE2 639 aa17.39■□□□□ 0.37
Trim39-203ENSMUST00000113706 Tgoln2Q62314 363 aa17.39■□□□□ 0.37
Trim39-203ENSMUST00000113706 Tmem130Q6NXM3 419 aa17.39■□□□□ 0.37
Trim39-203ENSMUST00000113706 TbataQ7TSD4 393 aa17.39■□□□□ 0.37
Trim39-203ENSMUST00000113706 Pnma1Q8C1C8 353 aa17.39■□□□□ 0.37
Trim39-203ENSMUST00000113706 Kiaa0391Q8JZY4 584 aaKnown RBP17.39■□□□□ 0.37
Trim39-203ENSMUST00000113706 CbsQ91WT9 561 aa17.39■□□□□ 0.37
Trim39-203ENSMUST00000113706 Ranbp17Q99NF8 1088 aa17.39■□□□□ 0.37
Trim39-203ENSMUST00000113706 Nfxl1E9Q8I7 918 aaKnown RBP17.38■□□□□ 0.37
Trim39-203ENSMUST00000113706 Nr1i3O35627 358 aa17.38■□□□□ 0.37
Trim39-203ENSMUST00000113706 Ap1b1O35643 943 aaKnown RBP17.38■□□□□ 0.37
Trim39-203ENSMUST00000113706 FlgP11088 336 aa17.38■□□□□ 0.37
Trim39-203ENSMUST00000113706 ItpripQ3TNL8 555 aa17.38■□□□□ 0.37
Trim39-203ENSMUST00000113706 Papd7Q6PB75 542 aa17.38■□□□□ 0.37
Trim39-203ENSMUST00000113706 Nsun6Q7TS68 476 aa17.38■□□□□ 0.37
Trim39-203ENSMUST00000113706 Ireb2Q811J3 963 aaKnown RBP17.38■□□□□ 0.37
Trim39-203ENSMUST00000113706 Bicdl2Q8CHW5 507 aa17.38■□□□□ 0.37
Trim39-203ENSMUST00000113706 Srgap2Q91Z67 1071 aa17.38■□□□□ 0.37
Trim39-203ENSMUST00000113706 Psma7Q9Z2U0 248 aa17.38■□□□□ 0.37
Trim39-203ENSMUST00000113706 Slc6a16A0A1L1SR47 742 aa17.38■□□□□ 0.37
Trim39-203ENSMUST00000113706 1700018F24RikB2RW27 314 aa17.38■□□□□ 0.37
Trim39-203ENSMUST00000113706 ErmardE9Q048 622 aa17.38■□□□□ 0.37
Trim39-203ENSMUST00000113706 Heatr4E9Q357 955 aa17.38■□□□□ 0.37
Trim39-203ENSMUST00000113706 Serpinb8O08800 374 aaKnown RBP17.38■□□□□ 0.37
Trim39-203ENSMUST00000113706 Ddx49Q4FZF3 480 aaKnown RBP17.38■□□□□ 0.37
Trim39-203ENSMUST00000113706 E2f8Q58FA4 860 aa17.38■□□□□ 0.37
Trim39-203ENSMUST00000113706 Tsr1Q5SWD9 803 aa17.38■□□□□ 0.37
Trim39-203ENSMUST00000113706 Krt31Q61765 416 aa17.38■□□□□ 0.37
Trim39-203ENSMUST00000113706 Usp33Q8R5K2 909 aa17.38■□□□□ 0.37
Trim39-203ENSMUST00000113706 Eif4a3Q91VC3 411 aaKnown RBP17.38■□□□□ 0.37
Trim39-203ENSMUST00000113706 4931423N10RikQ9D4J9 382 aa17.38■□□□□ 0.37
Trim39-203ENSMUST00000113706 Exoc4O35382 975 aa17.38■□□□□ 0.37
Trim39-203ENSMUST00000113706 Taf1bP97358 586 aa17.38■□□□□ 0.37
Retrieved 100 of 22,080 RNA–protein pairs in 41.3 ms