RNA–Protein interactions for RNA: ENSMUST00000113440.1

Ccdc88b-201, Transcript of Coiled-coil domain-containing protein 88B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc88b, Length 4,959 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88b-201ENSMUST00000113440 Gm3414Q3TNU4 584 aa16.76■□□□□ 0.27
Ccdc88b-201ENSMUST00000113440 Gpr162Q3UN16 588 aa16.76■□□□□ 0.27
Ccdc88b-201ENSMUST00000113440 Trim37Q6PCX9 961 aa16.76■□□□□ 0.27
Ccdc88b-201ENSMUST00000113440 GakQ99KY4 1305 aa16.76■□□□□ 0.27
Ccdc88b-201ENSMUST00000113440 Sema3fO88632 785 aa16.76■□□□□ 0.27
Ccdc88b-201ENSMUST00000113440 Slc9c1Q6UJY2 1175 aa16.76■□□□□ 0.27
Ccdc88b-201ENSMUST00000113440 6820408C15RikQ8BJX2 354 aa16.76■□□□□ 0.27
Ccdc88b-201ENSMUST00000113440 Mms19Q9D071 1031 aa16.76■□□□□ 0.27
Ccdc88b-201ENSMUST00000113440 1700109H08RikQ9D9C0 210 aa16.76■□□□□ 0.27
Ccdc88b-201ENSMUST00000113440 Adam7O35227 789 aa16.75■□□□□ 0.27
Ccdc88b-201ENSMUST00000113440 Mcl1P97287 331 aa16.75■□□□□ 0.27
Ccdc88b-201ENSMUST00000113440 Q3UJP5 209 aa16.75■□□□□ 0.27
Ccdc88b-201ENSMUST00000113440 WdpcpQ8C456 722 aa16.75■□□□□ 0.27
Ccdc88b-201ENSMUST00000113440 Spata32Q8C5V0 334 aa16.75■□□□□ 0.27
Ccdc88b-201ENSMUST00000113440 Cfap36Q8C6E0 343 aa16.75■□□□□ 0.27
Ccdc88b-201ENSMUST00000113440 Cgref1Q8R1U2 281 aa16.75■□□□□ 0.27
Ccdc88b-201ENSMUST00000113440 Ddah1Q9CWS0 285 aa16.75■□□□□ 0.27
Ccdc88b-201ENSMUST00000113440 Scgb2b18A0A087WPA9 112 aa16.75■□□□□ 0.27
Ccdc88b-201ENSMUST00000113440 Usp17lbE9Q9U0 468 aa16.75■□□□□ 0.27
Ccdc88b-201ENSMUST00000113440 E330017A01RikQ8BU47 192 aa16.75■□□□□ 0.27
Ccdc88b-201ENSMUST00000113440 Osbpl2Q8BX94 484 aa16.75■□□□□ 0.27
Ccdc88b-201ENSMUST00000113440 NenfQ9CQ45 171 aa16.75■□□□□ 0.27
Ccdc88b-201ENSMUST00000113440 Tns2Q8CGB6 1400 aa16.75■□□□□ 0.27
Ccdc88b-201ENSMUST00000113440 Cul4bA2A432 970 aaKnown RBP16.75■□□□□ 0.27
Ccdc88b-201ENSMUST00000113440 1810065E05RikQ5NC41 235 aa16.75■□□□□ 0.27
Ccdc88b-201ENSMUST00000113440 Arhgap10Q6Y5D8 786 aa16.75■□□□□ 0.27
Ccdc88b-201ENSMUST00000113440 Znf76Q8BMU0 568 aa16.75■□□□□ 0.27
Ccdc88b-201ENSMUST00000113440 Kat14Q8CID0 779 aa16.75■□□□□ 0.27
Ccdc88b-201ENSMUST00000113440 Inpp5bQ8K337 993 aa16.75■□□□□ 0.27
Ccdc88b-201ENSMUST00000113440 Tdrd3Q91W18 743 aaKnown RBP16.75■□□□□ 0.27
Ccdc88b-201ENSMUST00000113440 Pcdhb12Q91Y07 789 aa16.75■□□□□ 0.27
Ccdc88b-201ENSMUST00000113440 Tor1aip1Q921T2 595 aaKnown RBP16.75■□□□□ 0.27
Ccdc88b-201ENSMUST00000113440 Tmod1P49813 359 aa16.75■□□□□ 0.27
Ccdc88b-201ENSMUST00000113440 HelqQ2VPA6 1069 aa16.75■□□□□ 0.27
Ccdc88b-201ENSMUST00000113440 AlcamQ61490 583 aa16.75■□□□□ 0.27
Ccdc88b-201ENSMUST00000113440 Daam2Q80U19 1115 aa16.75■□□□□ 0.27
Ccdc88b-201ENSMUST00000113440 Iqcb1Q8BP00 598 aa16.75■□□□□ 0.27
Ccdc88b-201ENSMUST00000113440 Q922C1 641 aa16.75■□□□□ 0.27
Ccdc88b-201ENSMUST00000113440 Mmrn2A6H6E2 943 aa16.74■□□□□ 0.27
Ccdc88b-201ENSMUST00000113440 Tfdp1Q08639 410 aa16.74■□□□□ 0.27
Ccdc88b-201ENSMUST00000113440 Rbbp5Q8BX09 538 aaKnown RBP16.74■□□□□ 0.27
Ccdc88b-201ENSMUST00000113440 RnmtQ9D0L8 465 aaKnown RBP16.74■□□□□ 0.27
Ccdc88b-201ENSMUST00000113440 Adgrf5G5E8Q8 1348 aa16.74■□□□□ 0.27
Ccdc88b-201ENSMUST00000113440 Lrrc6O88978 473 aa16.74■□□□□ 0.27
Ccdc88b-201ENSMUST00000113440 PltpP55065 493 aa16.74■□□□□ 0.27
Ccdc88b-201ENSMUST00000113440 Zc3h18Q0P678 948 aaKnown RBP16.74■□□□□ 0.27
Ccdc88b-201ENSMUST00000113440 Cyp11b1Q3TG86 501 aa16.74■□□□□ 0.27
Ccdc88b-201ENSMUST00000113440 Plekha7Q3UIL6 1118 aaKnown RBP16.74■□□□□ 0.27
Ccdc88b-201ENSMUST00000113440 IqceQ6PCQ0 778 aa16.74■□□□□ 0.27
Ccdc88b-201ENSMUST00000113440 Ptrh1Q8BW00 204 aa16.74■□□□□ 0.27
Ccdc88b-201ENSMUST00000113440 Ttc8Q8VD72 515 aa16.74■□□□□ 0.27
Ccdc88b-201ENSMUST00000113440 Peg12Q9WVA7 283 aa16.74■□□□□ 0.27
Ccdc88b-201ENSMUST00000113440 Zfyve9A2A8R0 1397 aa16.74■□□□□ 0.27
Ccdc88b-201ENSMUST00000113440 DgkkE9Q7N4 1118 aa16.74■□□□□ 0.27
Ccdc88b-201ENSMUST00000113440 Nmt1O70310 496 aaKnown RBP16.74■□□□□ 0.27
Ccdc88b-201ENSMUST00000113440 Lrrc4bP0C192 709 aa16.74■□□□□ 0.27
Ccdc88b-201ENSMUST00000113440 D1Pas1P16381 660 aa16.74■□□□□ 0.27
Ccdc88b-201ENSMUST00000113440 Slc10a4Q3UEZ8 437 aa16.74■□□□□ 0.27
Ccdc88b-201ENSMUST00000113440 Sorbs1Q62417 1290 aa16.74■□□□□ 0.27
Ccdc88b-201ENSMUST00000113440 Actn1Q7TPR4 892 aaKnown RBP16.74■□□□□ 0.27
Ccdc88b-201ENSMUST00000113440 Slc4a7Q8BTY2 1034 aa16.74■□□□□ 0.27
Ccdc88b-201ENSMUST00000113440 Kbtbd4Q8R179 534 aa16.74■□□□□ 0.27
Ccdc88b-201ENSMUST00000113440 Med15Q924H2 789 aa16.74■□□□□ 0.27
Ccdc88b-201ENSMUST00000113440 Sh3bp5lQ99LH9 392 aa16.74■□□□□ 0.27
Ccdc88b-201ENSMUST00000113440 3830403N18RikQ9D6C3 208 aa16.74■□□□□ 0.27
Ccdc88b-201ENSMUST00000113440 Gm4307E9PZY4 289 aa16.74■□□□□ 0.27
Ccdc88b-201ENSMUST00000113440 Gm4312K9J7E2 289 aa16.74■□□□□ 0.27
Ccdc88b-201ENSMUST00000113440 Bnip3O55003 187 aa16.74■□□□□ 0.27
Ccdc88b-201ENSMUST00000113440 SpertQ32MG2 446 aa16.74■□□□□ 0.27
Ccdc88b-201ENSMUST00000113440 RbsnQ80Y56 783 aa16.74■□□□□ 0.27
Ccdc88b-201ENSMUST00000113440 Pabpc6Q9D4E6 643 aaKnown RBP16.74■□□□□ 0.27
Ccdc88b-201ENSMUST00000113440 Akt3Q9WUA6 479 aa16.74■□□□□ 0.27
Ccdc88b-201ENSMUST00000113440 Cyp2e1Q05421 493 aa16.73■□□□□ 0.27
Ccdc88b-201ENSMUST00000113440 Serpinb3dQ6UKZ0 387 aa16.73■□□□□ 0.27
Ccdc88b-201ENSMUST00000113440 Tbc1d22bQ80VE5 505 aa16.73■□□□□ 0.27
Ccdc88b-201ENSMUST00000113440 Cyp26b1Q811W2 512 aa16.73■□□□□ 0.27
Ccdc88b-201ENSMUST00000113440 GancQ8BVW0 898 aa16.73■□□□□ 0.27
Ccdc88b-201ENSMUST00000113440 4930449I24RikQ9D5E3 319 aa16.73■□□□□ 0.27
Ccdc88b-201ENSMUST00000113440 Bnip3lQ9Z2F7 218 aa16.73■□□□□ 0.27
Ccdc88b-201ENSMUST00000113440 Zmym2Q9CU65 1376 aa16.73■□□□□ 0.27
Ccdc88b-201ENSMUST00000113440 AtrnQ9WU60 1428 aa16.73■□□□□ 0.27
Ccdc88b-201ENSMUST00000113440 Cfap221A9Q751 836 aa16.73■□□□□ 0.27
Ccdc88b-201ENSMUST00000113440 4933406M09RikG3XA12 479 aa16.73■□□□□ 0.27
Ccdc88b-201ENSMUST00000113440 AgtP11859 477 aa16.73■□□□□ 0.27
Ccdc88b-201ENSMUST00000113440 ClgnP52194 611 aa16.73■□□□□ 0.27
Ccdc88b-201ENSMUST00000113440 Nlrp4cQ3TKR3 982 aa16.73■□□□□ 0.27
Ccdc88b-201ENSMUST00000113440 Ccdc110Q3V125 848 aa16.73■□□□□ 0.27
Ccdc88b-201ENSMUST00000113440 PccaQ91ZA3 724 aa16.73■□□□□ 0.27
Ccdc88b-201ENSMUST00000113440 Gm5936A2BG95 728 aa16.73■□□□□ 0.27
Ccdc88b-201ENSMUST00000113440 Gm5640A3KG49 728 aa16.73■□□□□ 0.27
Ccdc88b-201ENSMUST00000113440 SfnO70456 248 aaKnown RBP16.73■□□□□ 0.27
Ccdc88b-201ENSMUST00000113440 Rasgrf1P27671 1262 aa16.73■□□□□ 0.27
Ccdc88b-201ENSMUST00000113440 CtshP49935 333 aa16.73■□□□□ 0.27
Ccdc88b-201ENSMUST00000113440 Nsun7Q14AW5 724 aa16.73■□□□□ 0.27
Ccdc88b-201ENSMUST00000113440 Gtpbp6Q3U6U5 514 aa16.73■□□□□ 0.27
Ccdc88b-201ENSMUST00000113440 BC051142Q3V0M8 400 aa16.73■□□□□ 0.27
Ccdc88b-201ENSMUST00000113440 HomezQ80W88 542 aa16.73■□□□□ 0.27
Ccdc88b-201ENSMUST00000113440 Clasp2Q8BRT1 1286 aaKnown RBP16.73■□□□□ 0.27
Ccdc88b-201ENSMUST00000113440 Pde6cQ91ZQ1 861 aa16.73■□□□□ 0.27
Ccdc88b-201ENSMUST00000113440 Tube1Q9D6T1 475 aa16.73■□□□□ 0.27
Retrieved 100 of 22,080 RNA–protein pairs in 23 ms