RNA–Protein interactions for RNA: ENSMUST00000111180.8

Trim50-202, Transcript of E3 ubiquitin-protein ligase TRIM50, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim50, Length 1,456 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50-202ENSMUST00000111180 Agbl2Q8CDK2 862 aa13.73□□□□□ -0.21
Trim50-202ENSMUST00000111180 Rbm41Q8JZV4 413 aa13.73□□□□□ -0.21
Trim50-202ENSMUST00000111180 Serpinb12Q9D7P9 423 aa13.73□□□□□ -0.21
Trim50-202ENSMUST00000111180 Cdc42ep5Q9Z0X0 150 aa13.73□□□□□ -0.21
Trim50-202ENSMUST00000111180 Nlrc5C3VPR6 1915 aa13.72□□□□□ -0.21
Trim50-202ENSMUST00000111180 Zscan4-ps1A0A1C7CYV3 506 aa13.72□□□□□ -0.21
Trim50-202ENSMUST00000111180 Dnajc25A2ALW5 357 aa13.72□□□□□ -0.21
Trim50-202ENSMUST00000111180 Gm20503G3UZK1 150 aa13.72□□□□□ -0.21
Trim50-202ENSMUST00000111180 Ptpn22P29352 802 aa13.72□□□□□ -0.21
Trim50-202ENSMUST00000111180 PpardP35396 440 aa13.72□□□□□ -0.21
Trim50-202ENSMUST00000111180 Nek1P51954 1203 aa13.72□□□□□ -0.21
Trim50-202ENSMUST00000111180 Actr2P61161 394 aa13.72□□□□□ -0.21
Trim50-202ENSMUST00000111180 GaaP70699 953 aa13.72□□□□□ -0.21
Trim50-202ENSMUST00000111180 Krt14Q61781 484 aa13.72□□□□□ -0.21
Trim50-202ENSMUST00000111180 Mns1Q61884 491 aa13.72□□□□□ -0.21
Trim50-202ENSMUST00000111180 Serpinb3dQ6UKZ0 387 aa13.72□□□□□ -0.21
Trim50-202ENSMUST00000111180 Kdm1aQ6ZQ88 853 aa13.72□□□□□ -0.21
Trim50-202ENSMUST00000111180 Nsun6Q7TS68 476 aa13.72□□□□□ -0.21
Trim50-202ENSMUST00000111180 HyiQ8R1F5 277 aa13.72□□□□□ -0.21
Trim50-202ENSMUST00000111180 Rpap2Q8VC34 614 aa13.72□□□□□ -0.21
Trim50-202ENSMUST00000111180 Tas1r3Q925D8 858 aa13.72□□□□□ -0.21
Trim50-202ENSMUST00000111180 Ranbp17Q99NF8 1088 aa13.72□□□□□ -0.21
Trim50-202ENSMUST00000111180 Rhobtb3Q9CTN4 611 aa13.72□□□□□ -0.21
Trim50-202ENSMUST00000111180 Syce1Q9D495 329 aa13.72□□□□□ -0.21
Trim50-202ENSMUST00000111180 Ccdc105Q9D4K7 499 aa13.72□□□□□ -0.21
Trim50-202ENSMUST00000111180 Mss51Q9D5Z5 446 aa13.72□□□□□ -0.21
Trim50-202ENSMUST00000111180 Cfap45Q9D9U9 551 aa13.72□□□□□ -0.21
Trim50-202ENSMUST00000111180 Git2Q9JLQ2 708 aa13.72□□□□□ -0.21
Trim50-202ENSMUST00000111180 Prl2c5Q9JLV9 222 aa13.72□□□□□ -0.21
Trim50-202ENSMUST00000111180 Gm7168A0AUV4 508 aa13.71□□□□□ -0.21
Trim50-202ENSMUST00000111180 4932429P05RikA2ADI4 785 aa13.71□□□□□ -0.21
Trim50-202ENSMUST00000111180 Arhgef10lA2AWP8 1280 aa13.71□□□□□ -0.21
Trim50-202ENSMUST00000111180 Idh1O88844 414 aaKnown RBP13.71□□□□□ -0.21
Trim50-202ENSMUST00000111180 Adcy5P84309 1262 aa13.71□□□□□ -0.21
Trim50-202ENSMUST00000111180 Pstpip1P97814 415 aa13.71□□□□□ -0.21
Trim50-202ENSMUST00000111180 Gm3414Q3TNU4 584 aa13.71□□□□□ -0.21
Trim50-202ENSMUST00000111180 KhsrpQ3U0V1 748 aaKnown RBP13.71□□□□□ -0.21
Trim50-202ENSMUST00000111180 Cyfip1Q7TMB8 1253 aa13.71□□□□□ -0.21
Trim50-202ENSMUST00000111180 Zbed4Q80WQ9 1168 aa13.71□□□□□ -0.21
Trim50-202ENSMUST00000111180 EtnpplQ8BWU8 499 aa13.71□□□□□ -0.21
Trim50-202ENSMUST00000111180 Pnma1Q8C1C8 353 aa13.71□□□□□ -0.21
Trim50-202ENSMUST00000111180 NelfbQ8C4Y3 580 aa13.71□□□□□ -0.21
Trim50-202ENSMUST00000111180 Etv3Q8R4Z4 513 aa13.71□□□□□ -0.21
Trim50-202ENSMUST00000111180 Nrbp2Q91V36 499 aa13.71□□□□□ -0.21
Trim50-202ENSMUST00000111180 Xpo5Q924C1 1204 aaKnown RBP13.71□□□□□ -0.21
Trim50-202ENSMUST00000111180 Tab2Q99K90 693 aa13.71□□□□□ -0.21
Trim50-202ENSMUST00000111180 YwhabQ9CQV8 246 aaKnown RBP13.71□□□□□ -0.21
Trim50-202ENSMUST00000111180 Atad5Q4QY64 1826 aa13.7□□□□□ -0.22
Trim50-202ENSMUST00000111180 Brpf3B2KF05 1204 aaKnown RBP13.7□□□□□ -0.22
Trim50-202ENSMUST00000111180 Zscan25B2RX31 543 aa13.7□□□□□ -0.22
Trim50-202ENSMUST00000111180 Olfr67F8VPJ8 320 aa13.7□□□□□ -0.22
Trim50-202ENSMUST00000111180 Cops5O35864 334 aa13.7□□□□□ -0.22
Trim50-202ENSMUST00000111180 StrnO55106 780 aa13.7□□□□□ -0.22
Trim50-202ENSMUST00000111180 Stra6O70491 670 aa13.7□□□□□ -0.22
Trim50-202ENSMUST00000111180 Orc4O88708 433 aa13.7□□□□□ -0.22
Trim50-202ENSMUST00000111180 Abcb4P21440 1276 aa13.7□□□□□ -0.22
Trim50-202ENSMUST00000111180 Cd72P21855 354 aa13.7□□□□□ -0.22
Trim50-202ENSMUST00000111180 Samsn1P57725 372 aa13.7□□□□□ -0.22
Trim50-202ENSMUST00000111180 Mphosph8Q3TYA6 858 aaKnown RBP13.7□□□□□ -0.22
Trim50-202ENSMUST00000111180 Cacna2d4Q5RJF7 1116 aa13.7□□□□□ -0.22
Trim50-202ENSMUST00000111180 Ift88Q61371 824 aa13.7□□□□□ -0.22
Trim50-202ENSMUST00000111180 Antxr2Q6DFX2 487 aa13.7□□□□□ -0.22
Trim50-202ENSMUST00000111180 Tcaf3Q6QR59 914 aa13.7□□□□□ -0.22
Trim50-202ENSMUST00000111180 Nacc1Q7TSZ8 514 aa13.7□□□□□ -0.22
Trim50-202ENSMUST00000111180 Dnttip2Q8R2M2 758 aaKnown RBP13.7□□□□□ -0.22
Trim50-202ENSMUST00000111180 Exoc1Q8R3S6 894 aa13.7□□□□□ -0.22
Trim50-202ENSMUST00000111180 Rab3il1Q8VDV3 383 aa13.7□□□□□ -0.22
Trim50-202ENSMUST00000111180 Ddx39aQ8VDW0 427 aaKnown RBP13.7□□□□□ -0.22
Trim50-202ENSMUST00000111180 Ddx41Q91VN6 622 aaKnown RBP13.7□□□□□ -0.22
Trim50-202ENSMUST00000111180 Prb1Q91X93 504 aa13.7□□□□□ -0.22
Trim50-202ENSMUST00000111180 MymkQ9D1N4 221 aa13.7□□□□□ -0.22
Trim50-202ENSMUST00000111180 Cbx6Q9DBY5 414 aa13.7□□□□□ -0.22
Trim50-202ENSMUST00000111180 Mmel1Q9JLI3 765 aa13.7□□□□□ -0.22
Trim50-202ENSMUST00000111180 Nek3Q9R0A5 511 aa13.7□□□□□ -0.22
Trim50-202ENSMUST00000111180 R3hdm1E9Q9Q2 1135 aaKnown RBP13.69□□□□□ -0.22
Trim50-202ENSMUST00000111180 AurkbO70126 345 aa13.69□□□□□ -0.22
Trim50-202ENSMUST00000111180 UgcgO88693 394 aa13.69□□□□□ -0.22
Trim50-202ENSMUST00000111180 Gp6P0C191 313 aa13.69□□□□□ -0.22
Trim50-202ENSMUST00000111180 Aldh1a1P24549 501 aa13.69□□□□□ -0.22
Trim50-202ENSMUST00000111180 Man1a2P39098 641 aa13.69□□□□□ -0.22
Trim50-202ENSMUST00000111180 Syt2P46097 422 aa13.69□□□□□ -0.22
Trim50-202ENSMUST00000111180 EdnrbP48302 442 aa13.69□□□□□ -0.22
Trim50-202ENSMUST00000111180 PklrP53657 574 aa13.69□□□□□ -0.22
Trim50-202ENSMUST00000111180 Entpd7Q3TCT4 606 aa13.69□□□□□ -0.22
Trim50-202ENSMUST00000111180 Nlrp4cQ3TKR3 982 aa13.69□□□□□ -0.22
Trim50-202ENSMUST00000111180 Foxn3Q499D0 457 aa13.69□□□□□ -0.22
Trim50-202ENSMUST00000111180 Herc4Q6PAV2 1057 aa13.69□□□□□ -0.22
Trim50-202ENSMUST00000111180 Btnl9Q8BJE2 536 aa13.69□□□□□ -0.22
Trim50-202ENSMUST00000111180 Azin2Q8BVM4 459 aa13.69□□□□□ -0.22
Trim50-202ENSMUST00000111180 Ankk1Q8BZ25 745 aa13.69□□□□□ -0.22
Trim50-202ENSMUST00000111180 Spata32Q8C5V0 334 aa13.69□□□□□ -0.22
Trim50-202ENSMUST00000111180 Kcnk13Q8R1P5 405 aa13.69□□□□□ -0.22
Trim50-202ENSMUST00000111180 Hdhd5Q91WM2 419 aa13.69□□□□□ -0.22
Trim50-202ENSMUST00000111180 Pcdha12Q91Y18 950 aa13.69□□□□□ -0.22
Trim50-202ENSMUST00000111180 Pstpip2Q99M15 334 aa13.69□□□□□ -0.22
Trim50-202ENSMUST00000111180 RnmtQ9D0L8 465 aaKnown RBP13.69□□□□□ -0.22
Trim50-202ENSMUST00000111180 Myl7Q9QVP4 175 aa13.69□□□□□ -0.22
Trim50-202ENSMUST00000111180 Syt10Q9R0N4 523 aa13.69□□□□□ -0.22
Trim50-202ENSMUST00000111180 Abcb11Q9QY30 1321 aa13.69□□□□□ -0.22
Trim50-202ENSMUST00000111180 Mia3Q8BI84 1930 aa13.69□□□□□ -0.22
Retrieved 100 of 22,080 RNA–protein pairs in 14.2 ms