RNA–Protein interactions for RNA: ENSMUST00000111050.9

Bdnf-209, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 3,965 nt, Biotype protein coding, Subcellular localisation Dendrite .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-209ENSMUST00000111050 HnrnpcQ9Z204 313 aaKnown RBP8.23□□□□□ -1.09
Bdnf-209ENSMUST00000111050 B020011L13RikA0A087WQI7 412 aa8.22□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Ftl2P49945 183 aa8.22□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Hps5P59438 1126 aa8.22□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Crnkl1P63154 690 aaKnown RBP8.22□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Lrrfip1Q3UZ39 729 aaKnown RBP8.22□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Lamc2Q61092 1191 aa8.22□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Parp6Q6P6P7 630 aa8.22□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Rcn2Q8BP92 320 aa8.22□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Snx30Q8CE50 437 aa8.22□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Prpf3Q922U1 683 aaKnown RBP8.22□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Dph5Q9CWQ0 281 aa8.22□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Pgm1Q9D0F9 562 aa8.22□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Ccdc91Q9D8L5 442 aa8.22□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Mxra8Q9DBV4 442 aa8.22□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Sh2d3cQ9QZS8 854 aa8.22□□□□□ -1.09
Bdnf-209ENSMUST00000111050 RpgrQ9R0X5 1001 aa8.22□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Kat6bQ8BRB7 1872 aa8.22□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Gimap9G3X987 291 aa8.22□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Cetn3O35648 167 aa8.22□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Acot10Q32MW3 439 aa8.22□□□□□ -1.09
Bdnf-209ENSMUST00000111050 KizQ3UXL4 695 aa8.22□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Lrrc36Q3V0M2 755 aa8.22□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Taok1Q5F2E8 1001 aa8.22□□□□□ -1.09
Bdnf-209ENSMUST00000111050 XiapQ60989 496 aa8.22□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Gstt2Q61133 244 aa8.22□□□□□ -1.09
Bdnf-209ENSMUST00000111050 GartQ64737 1010 aa8.22□□□□□ -1.09
Bdnf-209ENSMUST00000111050 N4bp1Q6A037 893 aa8.22□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Ttc7aQ8BGB2 858 aa8.22□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Bicd1Q8BR07 835 aa8.22□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Chn1Q91V57 459 aa8.22□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Ciao1Q99KN2 339 aa8.22□□□□□ -1.09
Bdnf-209ENSMUST00000111050 QpctQ9CYK2 362 aa8.22□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Lonrf3Q9D4H7 753 aa8.22□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Ccdc124Q9D8X2 217 aaKnown RBP8.22□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Cd3dP04235 173 aa8.22□□□□□ -1.09
Bdnf-209ENSMUST00000111050 PdgfaP20033 211 aa8.22□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Polr2fP61219 127 aa8.22□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Tcerg1lQ3B807 590 aa8.22□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Mars2Q499X9 586 aaKnown RBP8.22□□□□□ -1.09
Bdnf-209ENSMUST00000111050 B3gnt3Q5JCS9 372 aa8.22□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Znf513Q6PD29 541 aa8.22□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Fnbp4Q6ZQ03 1031 aa8.22□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Trip10Q8CJ53 603 aa8.22□□□□□ -1.09
Bdnf-209ENSMUST00000111050 ItpkaQ8R071 459 aa8.22□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Cplx3Q8R1B5 158 aa8.22□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Rabep2Q91WG2 554 aa8.22□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Usp11Q99K46 921 aa8.22□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Tmem68Q9D850 329 aa8.22□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Ltb4r2Q9JJL9 360 aa8.22□□□□□ -1.09
Bdnf-209ENSMUST00000111050 EmcnQ9R0H2 261 aa8.22□□□□□ -1.09
Bdnf-209ENSMUST00000111050 ArcQ9WV31 396 aa8.22□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Kdm6aO70546 1401 aa8.22□□□□□ -1.09
Bdnf-209ENSMUST00000111050 PtprtQ99M80 1454 aa8.22□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Krt24A1L317 512 aa8.21□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Gsg1l2M0QWL6 290 aa8.21□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Uhmk1P97343 419 aa8.21□□□□□ -1.09
Bdnf-209ENSMUST00000111050 1700013D24RikQ0P521 120 aa8.21□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Lrig2Q52KR2 1054 aa8.21□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Sec23ipQ6NZC7 998 aa8.21□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Eif2aQ8BJW6 581 aaKnown RBP8.21□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Ccdc28aQ8CEI3 192 aa8.21□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Il17cQ8K4C5 194 aa8.21□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Apbb1ipQ8R5A3 670 aa8.21□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Smtnl1Q99LM3 459 aa8.21□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Srfbp1Q9CZ91 441 aaKnown RBP8.21□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Slc8a3S4R2P9 928 aa8.21□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Ccdc144bE9PVZ3 520 aa8.21□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Gm6121L7MUF1 212 aa8.21□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Pja1O55176 578 aa8.21□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Eef1bO70251 225 aaKnown RBP8.21□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Abcb4P21440 1276 aa8.21□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Psmc4P54775 418 aa8.21□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Zdhhc18Q5Y5T2 380 aa8.21□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Foxd4Q60688 444 aa8.21□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Jade3Q6IE82 823 aa8.21□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Rad17Q6NXW6 688 aa8.21□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Ccp110Q7TSH4 1004 aa8.21□□□□□ -1.09
Bdnf-209ENSMUST00000111050 AdalQ80SY6 360 aa8.21□□□□□ -1.09
Bdnf-209ENSMUST00000111050 RbakQ8BQC8 711 aa8.21□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Atp2a1Q8R429 994 aa8.21□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Gstm4Q8R5I6 218 aa8.21□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Mylk2Q8VCR8 613 aa8.21□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Prkag2Q91WG5 566 aa8.21□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Cabp7Q91ZM8 215 aa8.21□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Rhobtb3Q9CTN4 611 aa8.21□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Acsl3Q9CZW4 720 aaKnown RBP8.21□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Prss23Q9D6X6 382 aa8.21□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Plscr1Q9JJ00 328 aa8.21□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Tacc3Q9JJ11 631 aa8.21□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Scn7aB1AYL1 1681 aa8.21□□□□□ -1.1
Bdnf-209ENSMUST00000111050 N4bp2F8VQG7 1678 aaKnown RBP8.21□□□□□ -1.1
Bdnf-209ENSMUST00000111050 Prr16A3KMN5 304 aa8.21□□□□□ -1.1
Bdnf-209ENSMUST00000111050 NumblO08919 604 aa8.21□□□□□ -1.1
Bdnf-209ENSMUST00000111050 Art2bO35975 289 aa8.21□□□□□ -1.1
Bdnf-209ENSMUST00000111050 Pdk4O70571 412 aa8.21□□□□□ -1.1
Bdnf-209ENSMUST00000111050 Casp14O89094 257 aa8.21□□□□□ -1.1
Bdnf-209ENSMUST00000111050 Gpr182P43142 395 aa8.21□□□□□ -1.1
Bdnf-209ENSMUST00000111050 P3h1Q3V1T4 739 aa8.21□□□□□ -1.1
Bdnf-209ENSMUST00000111050 Gm5935Q497S0 212 aa8.21□□□□□ -1.1
Retrieved 100 of 22,080 RNA–protein pairs in 31.9 ms