RNA–Protein interactions for RNA: ENSMUST00000106441.7

Trim47-202, Transcript of Tripartite motif-containing protein 47, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim47, Length 2,192 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47-202ENSMUST00000106441 Opa1P58281 960 aa19.98■□□□□ 0.79
Trim47-202ENSMUST00000106441 Snap25P60879 206 aa19.98■□□□□ 0.79
Trim47-202ENSMUST00000106441 Serpinb6dQ3UWK8 375 aa19.98■□□□□ 0.79
Trim47-202ENSMUST00000106441 Exoc3Q6KAR6 755 aa19.98■□□□□ 0.79
Trim47-202ENSMUST00000106441 Dync1li2Q6PDL0 492 aaKnown RBP19.98■□□□□ 0.79
Trim47-202ENSMUST00000106441 Trnp1Q80ZI1 223 aa19.98■□□□□ 0.79
Trim47-202ENSMUST00000106441 Pak2Q8CIN4 524 aa19.98■□□□□ 0.79
Trim47-202ENSMUST00000106441 Bbs7Q8K2G4 715 aa19.98■□□□□ 0.79
Trim47-202ENSMUST00000106441 Tdrd3Q91W18 743 aaKnown RBP19.98■□□□□ 0.79
Trim47-202ENSMUST00000106441 Tm4sf4Q91XD3 202 aa19.98■□□□□ 0.79
Trim47-202ENSMUST00000106441 Mis12Q9CY25 206 aa19.98■□□□□ 0.79
Trim47-202ENSMUST00000106441 Prpf40aQ9R1C7 953 aaKnown RBP19.98■□□□□ 0.79
Trim47-202ENSMUST00000106441 Flot1O08917 428 aa19.98■□□□□ 0.79
Trim47-202ENSMUST00000106441 FlgP11088 336 aa19.98■□□□□ 0.79
Trim47-202ENSMUST00000106441 Tfcp2l1Q3UNW5 479 aa19.98■□□□□ 0.79
Trim47-202ENSMUST00000106441 GartQ64737 1010 aa19.98■□□□□ 0.79
Trim47-202ENSMUST00000106441 Rhbdf1Q6PIX5 856 aa19.98■□□□□ 0.79
Trim47-202ENSMUST00000106441 Fnbp1Q80TY0 616 aa19.98■□□□□ 0.79
Trim47-202ENSMUST00000106441 Gprasp2Q8BUY8 826 aa19.98■□□□□ 0.79
Trim47-202ENSMUST00000106441 Sgms1Q8VCQ6 419 aa19.98■□□□□ 0.79
Trim47-202ENSMUST00000106441 Ccdc43Q9CR29 222 aaKnown RBP19.98■□□□□ 0.79
Trim47-202ENSMUST00000106441 Ccnt1Q9QWV9 724 aaKnown RBP19.98■□□□□ 0.79
Trim47-202ENSMUST00000106441 Tex21Q9R0U9 575 aa19.98■□□□□ 0.79
Trim47-202ENSMUST00000106441 Plcg1Q62077 1302 aa19.97■□□□□ 0.79
Trim47-202ENSMUST00000106441 Magea8O89012 320 aa19.97■□□□□ 0.79
Trim47-202ENSMUST00000106441 Lmnb2P21619 596 aaKnown RBP19.97■□□□□ 0.79
Trim47-202ENSMUST00000106441 Gad1P48318 593 aa19.97■□□□□ 0.79
Trim47-202ENSMUST00000106441 Ccdc84Q4VA36 332 aaKnown RBP19.97■□□□□ 0.79
Trim47-202ENSMUST00000106441 Slc30a9Q5IRJ6 567 aa19.97■□□□□ 0.79
Trim47-202ENSMUST00000106441 March6Q6ZQ89 909 aa19.97■□□□□ 0.79
Trim47-202ENSMUST00000106441 Slc51bQ80WK2 128 aa19.97■□□□□ 0.79
Trim47-202ENSMUST00000106441 Thap3Q8BJ25 218 aa19.97■□□□□ 0.79
Trim47-202ENSMUST00000106441 Ccdc186Q8C9S4 917 aa19.97■□□□□ 0.79
Trim47-202ENSMUST00000106441 Syne4Q8CII8 388 aa19.97■□□□□ 0.79
Trim47-202ENSMUST00000106441 Slc4a8Q8JZR6 1089 aa19.97■□□□□ 0.79
Trim47-202ENSMUST00000106441 Oxnad1Q8VE38 311 aa19.97■□□□□ 0.79
Trim47-202ENSMUST00000106441 4921524L21RikQ9D5T2 438 aa19.97■□□□□ 0.79
Trim47-202ENSMUST00000106441 LrmdaQ9D9B4 229 aa19.97■□□□□ 0.79
Trim47-202ENSMUST00000106441 Slc5a4aQ9ET37 656 aa19.97■□□□□ 0.79
Trim47-202ENSMUST00000106441 Nap1l5Q9JJF0 156 aa19.97■□□□□ 0.79
Trim47-202ENSMUST00000106441 Dnaaf5B9EJR8 853 aa19.97■□□□□ 0.79
Trim47-202ENSMUST00000106441 Vmn2r79E9Q067 851 aa19.97■□□□□ 0.79
Trim47-202ENSMUST00000106441 Rfpl4bJ3QPR6 266 aa19.97■□□□□ 0.79
Trim47-202ENSMUST00000106441 Cdc25aP48964 514 aa19.97■□□□□ 0.79
Trim47-202ENSMUST00000106441 Fam83hQ148V8 1209 aa19.97■□□□□ 0.79
Trim47-202ENSMUST00000106441 Hdhd2Q3UGR5 259 aa19.97■□□□□ 0.79
Trim47-202ENSMUST00000106441 Pxylp1Q8BHA9 480 aa19.97■□□□□ 0.79
Trim47-202ENSMUST00000106441 Mettl5Q8K1A0 209 aa19.97■□□□□ 0.79
Trim47-202ENSMUST00000106441 Dusp19Q8K4T5 220 aa19.97■□□□□ 0.79
Trim47-202ENSMUST00000106441 Cdca7Q9D0M2 382 aa19.97■□□□□ 0.79
Trim47-202ENSMUST00000106441 Erp44Q9D1Q6 406 aa19.97■□□□□ 0.79
Trim47-202ENSMUST00000106441 Cul5Q9D5V5 780 aa19.97■□□□□ 0.79
Trim47-202ENSMUST00000106441 Sapcd2Q9D818 391 aa19.97■□□□□ 0.79
Trim47-202ENSMUST00000106441 Tjp3Q9QXY1 905 aa19.97■□□□□ 0.79
Trim47-202ENSMUST00000106441 AdnpQ9Z103 1108 aaKnown RBP19.97■□□□□ 0.79
Trim47-202ENSMUST00000106441 IkQ9Z1M8 557 aaKnown RBP19.97■□□□□ 0.79
Trim47-202ENSMUST00000106441 Trim30cD3YVI9 513 aa19.96■□□□□ 0.79
Trim47-202ENSMUST00000106441 Gm6588E9Q3K0 461 aa19.96■□□□□ 0.79
Trim47-202ENSMUST00000106441 Tnnc1P19123 161 aa19.96■□□□□ 0.79
Trim47-202ENSMUST00000106441 Hnrnph2P70333 449 aaKnown RBP19.96■□□□□ 0.79
Trim47-202ENSMUST00000106441 Yy1Q00899 414 aa19.96■□□□□ 0.79
Trim47-202ENSMUST00000106441 Nhej1Q3KNJ2 295 aa19.96■□□□□ 0.79
Trim47-202ENSMUST00000106441 Tnfaip8l3Q3TBL6 204 aa19.96■□□□□ 0.79
Trim47-202ENSMUST00000106441 MslnlQ8C160 685 aa19.96■□□□□ 0.79
Trim47-202ENSMUST00000106441 Lmbrd1Q8K0B2 537 aa19.96■□□□□ 0.79
Trim47-202ENSMUST00000106441 Prpf4Q9DAW6 521 aaKnown RBP19.96■□□□□ 0.79
Trim47-202ENSMUST00000106441 Azi2Q9QYP6 405 aa19.96■□□□□ 0.79
Trim47-202ENSMUST00000106441 Scgb2b12S4R2L0 112 aa19.96■□□□□ 0.79
Trim47-202ENSMUST00000106441 Slfn14V9GXG1 899 aa19.96■□□□□ 0.79
Trim47-202ENSMUST00000106441 Skint3A7TZF0 458 aa19.95■□□□□ 0.78
Trim47-202ENSMUST00000106441 Hnrnph1O35737 449 aaKnown RBP19.95■□□□□ 0.78
Trim47-202ENSMUST00000106441 Actn4P57780 912 aaKnown RBP19.95■□□□□ 0.78
Trim47-202ENSMUST00000106441 GabpaQ00422 454 aa19.95■□□□□ 0.78
Trim47-202ENSMUST00000106441 Agxt2Q3UEG6 513 aa19.95■□□□□ 0.78
Trim47-202ENSMUST00000106441 Q6PD19 689 aa19.95■□□□□ 0.78
Trim47-202ENSMUST00000106441 Krt9Q6RHW0 743 aa19.95■□□□□ 0.78
Trim47-202ENSMUST00000106441 Ccdc181Q80ZU5 509 aa19.95■□□□□ 0.78
Trim47-202ENSMUST00000106441 Lrrc24Q8BHA1 521 aa19.95■□□□□ 0.78
Trim47-202ENSMUST00000106441 Rassf10Q8BL43 508 aa19.95■□□□□ 0.78
Trim47-202ENSMUST00000106441 Depdc1aQ8CIG0 804 aa19.95■□□□□ 0.78
Trim47-202ENSMUST00000106441 Nr3c2Q8VII8 978 aa19.95■□□□□ 0.78
Trim47-202ENSMUST00000106441 Eif3hQ91WK2 352 aaKnown RBP19.95■□□□□ 0.78
Trim47-202ENSMUST00000106441 Smc6Q924W5 1097 aa19.95■□□□□ 0.78
Trim47-202ENSMUST00000106441 Tmem191cQ9JJB1 302 aa19.95■□□□□ 0.78
Trim47-202ENSMUST00000106441 Il13ra2O88786 383 aa19.95■□□□□ 0.78
Trim47-202ENSMUST00000106441 Nsun7Q14AW5 724 aa19.95■□□□□ 0.78
Trim47-202ENSMUST00000106441 Acsbg2Q2XU92 667 aa19.95■□□□□ 0.78
Trim47-202ENSMUST00000106441 Rnf207Q3V3A7 635 aa19.95■□□□□ 0.78
Trim47-202ENSMUST00000106441 Oxr1Q4KMM3 866 aa19.95■□□□□ 0.78
Trim47-202ENSMUST00000106441 Krt14Q61781 484 aa19.95■□□□□ 0.78
Trim47-202ENSMUST00000106441 Ces1eQ64176 562 aa19.95■□□□□ 0.78
Trim47-202ENSMUST00000106441 Gga2Q6P5E6 603 aa19.95■□□□□ 0.78
Trim47-202ENSMUST00000106441 Onecut3Q8K557 490 aa19.95■□□□□ 0.78
Trim47-202ENSMUST00000106441 Alg1Q921Q3 482 aa19.95■□□□□ 0.78
Trim47-202ENSMUST00000106441 Arl2bpQ9D385 163 aa19.95■□□□□ 0.78
Trim47-202ENSMUST00000106441 Ppp1r9aH3BJD6 1292 aa19.94■□□□□ 0.78
Trim47-202ENSMUST00000106441 SobpQ0P5V2 864 aa19.94■□□□□ 0.78
Trim47-202ENSMUST00000106441 Tex11Q14AT2 947 aa19.94■□□□□ 0.78
Trim47-202ENSMUST00000106441 Nr1d1Q3UV55 615 aa19.94■□□□□ 0.78
Trim47-202ENSMUST00000106441 Mybpc2Q5XKE0 1136 aa19.94■□□□□ 0.78
Retrieved 100 of 22,080 RNA–protein pairs in 26 ms