RNA–Protein interactions for RNA: ENSMUST00000071057.13

Ddx55-201, Transcript of ATP-dependent RNA helicase DDX55, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ddx55, Length 2,799 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55-201ENSMUST00000071057 Dqx1Q924H9 718 aa12.38□□□□□ -0.43
Ddx55-201ENSMUST00000071057 Pabpc6Q9D4E6 643 aaKnown RBP12.38□□□□□ -0.43
Ddx55-201ENSMUST00000071057 Atp11cQ9QZW0 1129 aa12.38□□□□□ -0.43
Ddx55-201ENSMUST00000071057 Magea10A2AMW4 325 aa12.38□□□□□ -0.43
Ddx55-201ENSMUST00000071057 Skor2A7M7C7 1008 aa12.38□□□□□ -0.43
Ddx55-201ENSMUST00000071057 Vmn2r79E9Q067 851 aa12.38□□□□□ -0.43
Ddx55-201ENSMUST00000071057 CatspereP0DP43 985 aa12.38□□□□□ -0.43
Ddx55-201ENSMUST00000071057 Rasip1Q3U0S6 961 aa12.38□□□□□ -0.43
Ddx55-201ENSMUST00000071057 Shc3Q61120 474 aa12.38□□□□□ -0.43
Ddx55-201ENSMUST00000071057 Dhx37Q6NZL1 1150 aa12.38□□□□□ -0.43
Ddx55-201ENSMUST00000071057 Snd1Q78PY7 910 aaKnown RBP12.38□□□□□ -0.43
Ddx55-201ENSMUST00000071057 Hgh1Q8C3I8 393 aa12.38□□□□□ -0.43
Ddx55-201ENSMUST00000071057 Q8CEZ4 452 aa12.38□□□□□ -0.43
Ddx55-201ENSMUST00000071057 Add1Q9QYC0 735 aaKnown RBP12.38□□□□□ -0.43
Ddx55-201ENSMUST00000071057 Krt36B1AQ75 473 aa12.37□□□□□ -0.43
Ddx55-201ENSMUST00000071057 Scfd2Q8BTY8 684 aa12.37□□□□□ -0.43
Ddx55-201ENSMUST00000071057 Zswim4Q8C7B8 1101 aa12.37□□□□□ -0.43
Ddx55-201ENSMUST00000071057 Bbs7Q8K2G4 715 aa12.37□□□□□ -0.43
Ddx55-201ENSMUST00000071057 Gprc5cQ8K3J9 440 aa12.37□□□□□ -0.43
Ddx55-201ENSMUST00000071057 Cmtr1Q9DBC3 837 aa12.37□□□□□ -0.43
Ddx55-201ENSMUST00000071057 Atrnl1Q6A051 1378 aa12.37□□□□□ -0.43
Ddx55-201ENSMUST00000071057 Scgb2b11A0A087WR49 112 aa12.37□□□□□ -0.43
Ddx55-201ENSMUST00000071057 Zfp984A2A7A2 547 aa12.37□□□□□ -0.43
Ddx55-201ENSMUST00000071057 Gm4985A2ALC6 410 aa12.37□□□□□ -0.43
Ddx55-201ENSMUST00000071057 Apol10bG3X9K7 334 aa12.37□□□□□ -0.43
Ddx55-201ENSMUST00000071057 Lig1P37913 916 aa12.37□□□□□ -0.43
Ddx55-201ENSMUST00000071057 Cap1P40124 474 aa12.37□□□□□ -0.43
Ddx55-201ENSMUST00000071057 Tfcp2l1Q3UNW5 479 aa12.37□□□□□ -0.43
Ddx55-201ENSMUST00000071057 Pabpc4Q6PHQ9 660 aaKnown RBP12.37□□□□□ -0.43
Ddx55-201ENSMUST00000071057 PolnQ7TQ07 864 aa12.37□□□□□ -0.43
Ddx55-201ENSMUST00000071057 RragaQ80X95 313 aa12.37□□□□□ -0.43
Ddx55-201ENSMUST00000071057 Vgll2Q8BGW8 322 aa12.37□□□□□ -0.43
Ddx55-201ENSMUST00000071057 D130040H23RikQ8BII3 405 aa12.37□□□□□ -0.43
Ddx55-201ENSMUST00000071057 Pnpla2Q8BJ56 486 aa12.37□□□□□ -0.43
Ddx55-201ENSMUST00000071057 Iqcb1Q8BP00 598 aa12.37□□□□□ -0.43
Ddx55-201ENSMUST00000071057 Gprasp2Q8BUY8 826 aa12.37□□□□□ -0.43
Ddx55-201ENSMUST00000071057 Trim47Q8C0E3 641 aa12.37□□□□□ -0.43
Ddx55-201ENSMUST00000071057 GanQ8CA72 597 aa12.37□□□□□ -0.43
Ddx55-201ENSMUST00000071057 Appl2Q8K3G9 662 aa12.37□□□□□ -0.43
Ddx55-201ENSMUST00000071057 Gpsm2Q8VDU0 679 aa12.37□□□□□ -0.43
Ddx55-201ENSMUST00000071057 Havcr2Q8VIM0 281 aa12.37□□□□□ -0.43
Ddx55-201ENSMUST00000071057 Kif17Q99PW8 1038 aa12.37□□□□□ -0.43
Ddx55-201ENSMUST00000071057 Mrpl11Q9CQF0 192 aaKnown RBP12.37□□□□□ -0.43
Ddx55-201ENSMUST00000071057 Tmem192Q9CXT7 266 aa12.37□□□□□ -0.43
Ddx55-201ENSMUST00000071057 Myl7Q9QVP4 175 aa12.37□□□□□ -0.43
Ddx55-201ENSMUST00000071057 C87977A2A958 498 aa12.36□□□□□ -0.43
Ddx55-201ENSMUST00000071057 Erich2E9Q1A6 463 aa12.36□□□□□ -0.43
Ddx55-201ENSMUST00000071057 Men1O88559 611 aaKnown RBP12.36□□□□□ -0.43
Ddx55-201ENSMUST00000071057 Dph1Q5NCQ5 438 aa12.36□□□□□ -0.43
Ddx55-201ENSMUST00000071057 Slc9c1Q6UJY2 1175 aa12.36□□□□□ -0.43
Ddx55-201ENSMUST00000071057 LdhdQ7TNG8 484 aa12.36□□□□□ -0.43
Ddx55-201ENSMUST00000071057 Prpf6Q91YR7 941 aaKnown RBP12.36□□□□□ -0.43
Ddx55-201ENSMUST00000071057 Trim7Q923T7 510 aa12.36□□□□□ -0.43
Ddx55-201ENSMUST00000071057 Psmd6Q99JI4 389 aa12.36□□□□□ -0.43
Ddx55-201ENSMUST00000071057 Fsip1Q9D3V5 435 aa12.36□□□□□ -0.43
Ddx55-201ENSMUST00000071057 Tlr9Q9EQU3 1032 aa12.36□□□□□ -0.43
Ddx55-201ENSMUST00000071057 Gm44G3UW88 330 aa12.36□□□□□ -0.43
Ddx55-201ENSMUST00000071057 Zw10O54692 779 aa12.36□□□□□ -0.43
Ddx55-201ENSMUST00000071057 Nck2O55033 380 aa12.36□□□□□ -0.43
Ddx55-201ENSMUST00000071057 Hoxa10P31310 416 aa12.36□□□□□ -0.43
Ddx55-201ENSMUST00000071057 Sec31aQ3UPL0 1230 aaKnown RBP12.36□□□□□ -0.43
Ddx55-201ENSMUST00000071057 Tpp2Q64514 1262 aa12.36□□□□□ -0.43
Ddx55-201ENSMUST00000071057 Sap130Q8BIH0 1057 aa12.36□□□□□ -0.43
Ddx55-201ENSMUST00000071057 PygbQ8CI94 843 aaKnown RBP12.36□□□□□ -0.43
Ddx55-201ENSMUST00000071057 Enox2Q8R0Z2 598 aa12.36□□□□□ -0.43
Ddx55-201ENSMUST00000071057 Olfr805Q8VFI4 319 aa12.36□□□□□ -0.43
Ddx55-201ENSMUST00000071057 Coro7Q9D2V7 922 aa12.36□□□□□ -0.43
Ddx55-201ENSMUST00000071057 Rwdd2aQ9D9S3 292 aa12.36□□□□□ -0.43
Ddx55-201ENSMUST00000071057 Lonp2Q9DBN5 852 aa12.36□□□□□ -0.43
Ddx55-201ENSMUST00000071057 PdclQ9DBX2 301 aa12.36□□□□□ -0.43
Ddx55-201ENSMUST00000071057 IgtpQ9DCE9 423 aa12.36□□□□□ -0.43
Ddx55-201ENSMUST00000071057 Pex11aQ9Z211 246 aa12.36□□□□□ -0.43
Ddx55-201ENSMUST00000071057 Fyb2A2A995 729 aa12.35□□□□□ -0.43
Ddx55-201ENSMUST00000071057 Sclt1G5E861 688 aa12.35□□□□□ -0.43
Ddx55-201ENSMUST00000071057 Slc27a2O35488 620 aa12.35□□□□□ -0.43
Ddx55-201ENSMUST00000071057 RpsaP14206 295 aaKnown RBP12.35□□□□□ -0.43
Ddx55-201ENSMUST00000071057 Ifnar1P33896 590 aa12.35□□□□□ -0.43
Ddx55-201ENSMUST00000071057 Tmem232Q5K6N0 675 aa12.35□□□□□ -0.43
Ddx55-201ENSMUST00000071057 Atp1a2Q6PIE5 1020 aa12.35□□□□□ -0.43
Ddx55-201ENSMUST00000071057 Asic3Q6X1Y6 530 aa12.35□□□□□ -0.43
Ddx55-201ENSMUST00000071057 Haus4Q8BFT2 363 aa12.35□□□□□ -0.43
Ddx55-201ENSMUST00000071057 Erich5Q8K0S2 362 aa12.35□□□□□ -0.43
Ddx55-201ENSMUST00000071057 Trappc12Q8K2L8 797 aa12.35□□□□□ -0.43
Ddx55-201ENSMUST00000071057 Ablim1Q8K4G5 861 aa12.35□□□□□ -0.43
Ddx55-201ENSMUST00000071057 Dbndd2Q9CRD4 158 aa12.35□□□□□ -0.43
Ddx55-201ENSMUST00000071057 NapgQ9CWZ7 312 aa12.35□□□□□ -0.43
Ddx55-201ENSMUST00000071057 Eef1gQ9D8N0 437 aaKnown RBP12.35□□□□□ -0.43
Ddx55-201ENSMUST00000071057 Ccdc89Q9DA73 370 aa12.35□□□□□ -0.43
Ddx55-201ENSMUST00000071057 Rab27aQ9ERI2 221 aa12.35□□□□□ -0.43
Ddx55-201ENSMUST00000071057 DexiQ9WUQ7 95 aa12.35□□□□□ -0.43
Ddx55-201ENSMUST00000071057 Arhgef10lA2AWP8 1280 aa12.35□□□□□ -0.43
Ddx55-201ENSMUST00000071057 Ccdc78D3Z5T1 437 aa12.35□□□□□ -0.43
Ddx55-201ENSMUST00000071057 ArP19091 899 aa12.35□□□□□ -0.43
Ddx55-201ENSMUST00000071057 H2afxP27661 143 aaKnown RBP12.35□□□□□ -0.43
Ddx55-201ENSMUST00000071057 Nr2f2P43135 414 aa12.35□□□□□ -0.43
Ddx55-201ENSMUST00000071057 Kifap3P70188 793 aa12.35□□□□□ -0.43
Ddx55-201ENSMUST00000071057 NfibP97863 570 aaKnown RBP12.35□□□□□ -0.43
Ddx55-201ENSMUST00000071057 YdjcQ14BV6 310 aa12.35□□□□□ -0.43
Ddx55-201ENSMUST00000071057 Zmym1Q3TJB1 983 aa12.35□□□□□ -0.43
Ddx55-201ENSMUST00000071057 IgflQ6B9Z0 140 aa12.35□□□□□ -0.43
Retrieved 100 of 22,080 RNA–protein pairs in 53.4 ms