RNA–Protein interactions for RNA: ENSMUST00000053440.7

Ccdc40-202, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc40, Length 3,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-202ENSMUST00000053440 Cyfip2Q5SQX6 1253 aa10.66□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 EsrrbQ61539 433 aa10.66□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Sin3bQ62141 1098 aa10.66□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Mcf2lQ64096 1149 aa10.66□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 AdalQ80SY6 360 aa10.66□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Atxn7Q8R4I1 867 aa10.66□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Q922C1 641 aa10.66□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Psma8Q9CWH6 250 aa10.66□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Eif2ak1Q9Z2R9 619 aa10.66□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 C4bP01029 1738 aa10.66□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Gm5737A0A140LI11 423 aa10.66□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 DtnbO70585 659 aa10.66□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 FechP22315 420 aaKnown RBP10.66□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Vcam1P29533 739 aa10.66□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Tex35Q14BK3 207 aa10.66□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Six2Q62232 296 aa10.66□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 E330017A01RikQ8BU47 192 aa10.66□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Oxnad1Q8VE38 311 aa10.66□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Yipf1Q91VU1 306 aa10.66□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Pstpip2Q99M15 334 aa10.66□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 MlxiplQ99MZ3 864 aa10.66□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Slc5a5Q99PN0 618 aa10.66□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Fam133bQ9CVI2 245 aaKnown RBP10.66□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Entpd5Q9WUZ9 427 aa10.66□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 R3hdm1E9Q9Q2 1135 aaKnown RBP10.66□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Cdc25aP48964 514 aa10.66□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Ice2Q3UZ18 988 aaKnown RBP10.66□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Jade3Q6IE82 823 aa10.66□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Efcab14Q8BGQ6 484 aa10.66□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 CnstQ8CBC4 711 aa10.66□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 BbxQ8VBW5 907 aa10.66□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Cul1Q9WTX6 776 aa10.66□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Scgb2b7D3YYY1 112 aa10.65□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Traf5P70191 558 aa10.65□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Flt3Q00342 1000 aa10.65□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Vmn1r209Q5NC97 312 aa10.65□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Klra5Q60652 266 aa10.65□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 FdxrQ61578 494 aa10.65□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Ccdc28aQ8CEI3 192 aa10.65□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Nup58Q8R332 587 aa10.65□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 CpzQ8R4V4 654 aa10.65□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Rpap2Q8VC34 614 aa10.65□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 St5Q924W7 1134 aa10.65□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Zbed3Q9D0L1 228 aa10.65□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Tfr2Q9JKX3 798 aa10.65□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 ArcQ9WV31 396 aa10.65□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 VirmaA2AIV2 1811 aaKnown RBP10.65□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Tex13c2A0A0G2JGA3 530 aa10.65□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Klhdc7aA2APT9 773 aa10.65□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Ttll10A4Q9F3 704 aa10.65□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Gm382B1AXN3 1250 aa10.65□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Ccdc78D3Z5T1 437 aa10.65□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Gm38392E9Q2A2 434 aa10.65□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Ercc5P35689 1170 aa10.65□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Bend4P86174 541 aa10.65□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Q32P12 615 aa10.65□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 MaeaQ4VC33 396 aa10.65□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 WaplQ65Z40 1200 aaKnown RBP10.65□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 GnptabQ69ZN6 1235 aa10.65□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Ttc16Q8C1F5 767 aa10.65□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 PdxkQ8K183 312 aa10.65□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Bzw2Q91VK1 419 aaKnown RBP10.65□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Coa7Q921H9 231 aa10.65□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 PigoQ9JJI6 1093 aa10.65□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Mpp3O88910 568 aa10.64□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Serpina1bP22599 413 aa10.64□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Scnn1aQ61180 699 aa10.64□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Zdhhc24Q6IR37 284 aa10.64□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Gcfc2Q8BKT3 769 aa10.64□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 CgasQ8C6L5 507 aa10.64□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Ces4aQ8R0W5 563 aa10.64□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Cbwd1Q8VEH6 393 aa10.64□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Drap1Q9D6N5 205 aa10.64□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Eid1Q9DCR4 169 aa10.64□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 PlekQ9JHK5 350 aaKnown RBP10.64□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Azi2Q9QYP6 405 aa10.64□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Cog1Q9Z160 980 aa10.64□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Pitpnm2Q6ZPQ6 1335 aa10.64□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 DohhA0A1Y7VJ29 135 aa10.64□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Fam171a1A2ATK9 892 aa10.64□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Skor2A7M7C7 1008 aa10.64□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Rpl13P47963 211 aaKnown RBP10.64□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Trim43cP86449 446 aa10.64□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Npdc1Q64322 332 aa10.64□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Rps6ka6Q7TPS0 764 aa10.64□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 IarsQ8BU30 1262 aa10.64□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 SucoQ8C341 1250 aa10.64□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Themis2Q91YX0 663 aa10.64□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Gps2Q921N8 327 aa10.64□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Stk4Q9JI11 487 aa10.64□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Uchl3Q9JKB1 230 aa10.64□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Slfn14V9GXG1 899 aa10.64□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Sclt1G5E861 688 aa10.64□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Esr2O08537 530 aa10.64□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 UncxO08934 530 aa10.64□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Tom1O88746 492 aa10.64□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 EporP14753 507 aa10.64□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Epb41l4aP52963 686 aa10.64□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Tnfaip8l3Q3TBL6 204 aa10.64□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Ppp2r2aQ6P1F6 447 aa10.64□□□□□ -0.71
Retrieved 100 of 22,080 RNA–protein pairs in 16.5 ms