RNA–Protein interactions for RNA: ENSMUST00000038514.14

Nup54-201, Transcript of Nuclear pore complex protein Nup54, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup54, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54-201ENSMUST00000038514 Trip13Q3UA06 432 aa16.31■□□□□ 0.2
Nup54-201ENSMUST00000038514 Tspyl5Q69ZB3 406 aa16.31■□□□□ 0.2
Nup54-201ENSMUST00000038514 GnptabQ69ZN6 1235 aa16.31■□□□□ 0.2
Nup54-201ENSMUST00000038514 Fgd5Q80UZ0 1219 aa16.31■□□□□ 0.2
Nup54-201ENSMUST00000038514 Snx14Q8BHY8 964 aa16.31■□□□□ 0.2
Nup54-201ENSMUST00000038514 IarsQ8BU30 1262 aa16.31■□□□□ 0.2
Nup54-201ENSMUST00000038514 Als2cr12Q8BVM7 383 aa16.31■□□□□ 0.2
Nup54-201ENSMUST00000038514 Bhmt2Q91WS4 363 aa16.31■□□□□ 0.2
Nup54-201ENSMUST00000038514 Gps2Q921N8 327 aa16.31■□□□□ 0.2
Nup54-201ENSMUST00000038514 Abcf2Q99LE6 628 aaKnown RBP16.31■□□□□ 0.2
Nup54-201ENSMUST00000038514 Lrp2bpQ9D4C6 346 aa16.31■□□□□ 0.2
Nup54-201ENSMUST00000038514 IvdQ9JHI5 424 aa16.31■□□□□ 0.2
Nup54-201ENSMUST00000038514 Gfpt2Q9Z2Z9 682 aa16.31■□□□□ 0.2
Nup54-201ENSMUST00000038514 Ubr3Q5U430 1889 aa16.31■□□□□ 0.2
Nup54-201ENSMUST00000038514 Zfp174B9EJW5 407 aa16.31■□□□□ 0.2
Nup54-201ENSMUST00000038514 Gm6121L7MUF1 212 aa16.31■□□□□ 0.2
Nup54-201ENSMUST00000038514 Esr2O08537 530 aa16.31■□□□□ 0.2
Nup54-201ENSMUST00000038514 EporP14753 507 aa16.31■□□□□ 0.2
Nup54-201ENSMUST00000038514 Ephb4P54761 987 aa16.31■□□□□ 0.2
Nup54-201ENSMUST00000038514 Meis2P97367 477 aa16.31■□□□□ 0.2
Nup54-201ENSMUST00000038514 Ogfod1Q3U0K8 545 aa16.31■□□□□ 0.2
Nup54-201ENSMUST00000038514 Znf583Q3V080 568 aa16.31■□□□□ 0.2
Nup54-201ENSMUST00000038514 Klra5Q60652 266 aa16.31■□□□□ 0.2
Nup54-201ENSMUST00000038514 Nr2e1Q64104 385 aa16.31■□□□□ 0.2
Nup54-201ENSMUST00000038514 Mboat7Q8CHK3 473 aa16.31■□□□□ 0.2
Nup54-201ENSMUST00000038514 Galnt15Q9D2N8 638 aa16.31■□□□□ 0.2
Nup54-201ENSMUST00000038514 Cdc42ep4Q9JM96 349 aaKnown RBP16.31■□□□□ 0.2
Nup54-201ENSMUST00000038514 NagaQ9QWR8 415 aa16.31■□□□□ 0.2
Nup54-201ENSMUST00000038514 Ccdc78D3Z5T1 437 aa16.3■□□□□ 0.2
Nup54-201ENSMUST00000038514 Copb2O55029 905 aa16.3■□□□□ 0.2
Nup54-201ENSMUST00000038514 CatspereP0DP43 985 aa16.3■□□□□ 0.2
Nup54-201ENSMUST00000038514 Ddr1Q03146 911 aa16.3■□□□□ 0.2
Nup54-201ENSMUST00000038514 Kctd16Q5DTY9 427 aa16.3■□□□□ 0.2
Nup54-201ENSMUST00000038514 Akap4Q60662 849 aa16.3■□□□□ 0.2
Nup54-201ENSMUST00000038514 Gle1Q8R322 699 aa16.3■□□□□ 0.2
Nup54-201ENSMUST00000038514 Gtf2iQ9ESZ8 998 aaKnown RBP16.3■□□□□ 0.2
Nup54-201ENSMUST00000038514 PigoQ9JJI6 1093 aa16.3■□□□□ 0.2
Nup54-201ENSMUST00000038514 Plxnb2B2RXS4 1842 aa16.3■□□□□ 0.2
Nup54-201ENSMUST00000038514 Cpsf2O35218 782 aaKnown RBP16.3■□□□□ 0.2
Nup54-201ENSMUST00000038514 Tagap1P0CAX8 505 aa16.3■□□□□ 0.2
Nup54-201ENSMUST00000038514 Fgfr1opQ66JX5 399 aa16.3■□□□□ 0.2
Nup54-201ENSMUST00000038514 SucoQ8C341 1250 aa16.3■□□□□ 0.2
Nup54-201ENSMUST00000038514 Tut1Q8R3F9 869 aa16.3■□□□□ 0.2
Nup54-201ENSMUST00000038514 Pcdhb5Q91XZ5 792 aa16.3■□□□□ 0.2
Nup54-201ENSMUST00000038514 Cse1lQ9ERK4 971 aaKnown RBP16.3■□□□□ 0.2
Nup54-201ENSMUST00000038514 Nup50Q9JIH2 466 aaKnown RBP16.3■□□□□ 0.2
Nup54-201ENSMUST00000038514 Edf1Q9JMG1 148 aaKnown RBP16.3■□□□□ 0.2
Nup54-201ENSMUST00000038514 Col11a2Q64739 1736 aa16.3■□□□□ 0.2
Nup54-201ENSMUST00000038514 Gm14525B1AZA0 212 aa16.29■□□□□ 0.2
Nup54-201ENSMUST00000038514 Gm2012B1B0R1 212 aa16.29■□□□□ 0.2
Nup54-201ENSMUST00000038514 Chmp6P0C0A3 200 aa16.29■□□□□ 0.2
Nup54-201ENSMUST00000038514 MagohP61327 146 aaKnown RBP16.29■□□□□ 0.2
Nup54-201ENSMUST00000038514 Glg1Q61543 1175 aaKnown RBP16.29■□□□□ 0.2
Nup54-201ENSMUST00000038514 Gm14819Q62478 212 aa16.29■□□□□ 0.2
Nup54-201ENSMUST00000038514 Fam196bQ6GQV1 535 aa16.29■□□□□ 0.2
Nup54-201ENSMUST00000038514 AdalQ80SY6 360 aa16.29■□□□□ 0.2
Nup54-201ENSMUST00000038514 BC048507Q80ZS7 89 aa16.29■□□□□ 0.2
Nup54-201ENSMUST00000038514 Eno4Q8C042 619 aa16.29■□□□□ 0.2
Nup54-201ENSMUST00000038514 Tbx22Q8K402 517 aa16.29■□□□□ 0.2
Nup54-201ENSMUST00000038514 F11Q91Y47 624 aa16.29■□□□□ 0.2
Nup54-201ENSMUST00000038514 MagohbQ9CQL1 146 aa16.29■□□□□ 0.2
Nup54-201ENSMUST00000038514 Pramef12Q9D2F1 463 aa16.29■□□□□ 0.2
Nup54-201ENSMUST00000038514 Styxl1Q9DAR2 321 aa16.29■□□□□ 0.2
Nup54-201ENSMUST00000038514 Tlr2Q9QUN7 784 aa16.29■□□□□ 0.2
Nup54-201ENSMUST00000038514 Entpd5Q9WUZ9 427 aa16.29■□□□□ 0.2
Nup54-201ENSMUST00000038514 Usp31E9Q6Y8 1344 aa16.29■□□□□ 0.2
Nup54-201ENSMUST00000038514 Fam171a1A2ATK9 892 aa16.29■□□□□ 0.2
Nup54-201ENSMUST00000038514 Sema4dO09126 861 aa16.29■□□□□ 0.2
Nup54-201ENSMUST00000038514 Ercc5P35689 1170 aa16.29■□□□□ 0.2
Nup54-201ENSMUST00000038514 Rpl13P47963 211 aaKnown RBP16.29■□□□□ 0.2
Nup54-201ENSMUST00000038514 Shox2P70390 331 aa16.29■□□□□ 0.2
Nup54-201ENSMUST00000038514 HnrnpdQ60668 355 aaKnown RBP16.29■□□□□ 0.2
Nup54-201ENSMUST00000038514 Sorbs1Q62417 1290 aa16.29■□□□□ 0.2
Nup54-201ENSMUST00000038514 WaplQ65Z40 1200 aaKnown RBP16.29■□□□□ 0.2
Nup54-201ENSMUST00000038514 Lrig3Q6P1C6 1117 aa16.29■□□□□ 0.2
Nup54-201ENSMUST00000038514 Phf20Q8BLG0 1010 aaKnown RBP16.29■□□□□ 0.2
Nup54-201ENSMUST00000038514 Ccdc15Q8C9M2 810 aa16.29■□□□□ 0.2
Nup54-201ENSMUST00000038514 PpatQ8CIH9 517 aa16.29■□□□□ 0.2
Nup54-201ENSMUST00000038514 Slc35f6Q8VE96 372 aa16.29■□□□□ 0.2
Nup54-201ENSMUST00000038514 Hyou1Q9JKR6 999 aaKnown RBP16.29■□□□□ 0.2
Nup54-201ENSMUST00000038514 Gdf11Q9Z1W4 405 aa16.29■□□□□ 0.2
Nup54-201ENSMUST00000038514 Eif2ak1Q9Z2R9 619 aa16.29■□□□□ 0.2
Nup54-201ENSMUST00000038514 Tnfrsf11aO35305 625 aa16.28■□□□□ 0.2
Nup54-201ENSMUST00000038514 PrphP15331 475 aa16.28■□□□□ 0.2
Nup54-201ENSMUST00000038514 KhsrpQ3U0V1 748 aaKnown RBP16.28■□□□□ 0.2
Nup54-201ENSMUST00000038514 Ttc16Q8C1F5 767 aa16.28■□□□□ 0.2
Nup54-201ENSMUST00000038514 Ces4aQ8R0W5 563 aa16.28■□□□□ 0.2
Nup54-201ENSMUST00000038514 Slf1Q8R3P9 1054 aa16.28■□□□□ 0.2
Nup54-201ENSMUST00000038514 PtenO08586 403 aa16.28■□□□□ 0.2
Nup54-201ENSMUST00000038514 Psmd1Q3TXS7 953 aa16.28■□□□□ 0.2
Nup54-201ENSMUST00000038514 Krt15Q61414 452 aa16.28■□□□□ 0.2
Nup54-201ENSMUST00000038514 Ptger2Q62053 362 aa16.28■□□□□ 0.2
Nup54-201ENSMUST00000038514 Epn2Q8CHU3 595 aa16.28■□□□□ 0.2
Nup54-201ENSMUST00000038514 Afg3l2Q8JZQ2 802 aaKnown RBP16.28■□□□□ 0.2
Nup54-201ENSMUST00000038514 Dnajc28Q8VCE1 385 aa16.28■□□□□ 0.2
Nup54-201ENSMUST00000038514 Slc5a5Q99PN0 618 aa16.28■□□□□ 0.2
Nup54-201ENSMUST00000038514 Fam111aQ9D2L9 613 aa16.28■□□□□ 0.2
Nup54-201ENSMUST00000038514 Hsf3D0VYS2 492 aa16.27■□□□□ 0.2
Nup54-201ENSMUST00000038514 HelqQ2VPA6 1069 aa16.27■□□□□ 0.2
Nup54-201ENSMUST00000038514 Ndufaf2Q59J78 168 aa16.27■□□□□ 0.2
Retrieved 100 of 22,080 RNA–protein pairs in 23.2 ms