RNA–Protein interactions for RNA: ENSMUST00000022220.12

Msh3-201, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Msh3, Length 3,937 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-201ENSMUST00000022220 Ctage5Q8R311 779 aa11.76□□□□□ -0.53
Msh3-201ENSMUST00000022220 Slf1Q8R3P9 1054 aa11.76□□□□□ -0.53
Msh3-201ENSMUST00000022220 Als2Q920R0 1651 aa11.76□□□□□ -0.53
Msh3-201ENSMUST00000022220 Bap1Q99PU7 728 aa11.76□□□□□ -0.53
Msh3-201ENSMUST00000022220 3830403N18RikQ9D6C3 208 aa11.76□□□□□ -0.53
Msh3-201ENSMUST00000022220 Borcs6Q9D6W8 360 aa11.76□□□□□ -0.53
Msh3-201ENSMUST00000022220 1700018B08RikQ9DA83 213 aa11.76□□□□□ -0.53
Msh3-201ENSMUST00000022220 C87977A2A958 498 aa11.76□□□□□ -0.53
Msh3-201ENSMUST00000022220 Gap43P06837 227 aa11.76□□□□□ -0.53
Msh3-201ENSMUST00000022220 RaraP11416 462 aa11.76□□□□□ -0.53
Msh3-201ENSMUST00000022220 Cyp11b2P15539 500 aa11.76□□□□□ -0.53
Msh3-201ENSMUST00000022220 Rps6ka1P18653 724 aa11.76□□□□□ -0.53
Msh3-201ENSMUST00000022220 Psen1P49769 467 aa11.76□□□□□ -0.53
Msh3-201ENSMUST00000022220 Zbtb17Q60821 794 aa11.76□□□□□ -0.53
Msh3-201ENSMUST00000022220 GartQ64737 1010 aa11.76□□□□□ -0.53
Msh3-201ENSMUST00000022220 Kiaa1328Q6NZK5 612 aa11.76□□□□□ -0.53
Msh3-201ENSMUST00000022220 Haus4Q8BFT2 363 aa11.76□□□□□ -0.53
Msh3-201ENSMUST00000022220 Dnajc28Q8VCE1 385 aa11.76□□□□□ -0.53
Msh3-201ENSMUST00000022220 Tpd52l2Q9CYZ2 220 aaKnown RBP11.76□□□□□ -0.53
Msh3-201ENSMUST00000022220 EvplQ9D952 2035 aa11.76□□□□□ -0.53
Msh3-201ENSMUST00000022220 Scgb2b18A0A087WPA9 112 aa11.76□□□□□ -0.53
Msh3-201ENSMUST00000022220 Vmn2r79E9Q067 851 aa11.76□□□□□ -0.53
Msh3-201ENSMUST00000022220 Gimap9G3X987 291 aa11.76□□□□□ -0.53
Msh3-201ENSMUST00000022220 Il27raO70394 623 aa11.76□□□□□ -0.53
Msh3-201ENSMUST00000022220 MlxipQ2VPU4 917 aa11.76□□□□□ -0.53
Msh3-201ENSMUST00000022220 Ccdc160Q3UYG1 323 aa11.76□□□□□ -0.53
Msh3-201ENSMUST00000022220 Gigyf2Q6Y7W8 1291 aaKnown RBP11.76□□□□□ -0.53
Msh3-201ENSMUST00000022220 RadxQ8C779 850 aa11.76□□□□□ -0.53
Msh3-201ENSMUST00000022220 Bcs1lQ9CZP5 418 aa11.76□□□□□ -0.53
Msh3-201ENSMUST00000022220 1700109H08RikQ9D9C0 210 aa11.76□□□□□ -0.53
Msh3-201ENSMUST00000022220 Sucla2Q9Z2I9 463 aa11.76□□□□□ -0.53
Msh3-201ENSMUST00000022220 Gm4841E9QAA8 417 aa11.75□□□□□ -0.53
Msh3-201ENSMUST00000022220 Gad1P48318 593 aa11.75□□□□□ -0.53
Msh3-201ENSMUST00000022220 Vil1Q62468 827 aa11.75□□□□□ -0.53
Msh3-201ENSMUST00000022220 Git1Q68FF6 770 aa11.75□□□□□ -0.53
Msh3-201ENSMUST00000022220 Krt42Q6IFX2 452 aa11.75□□□□□ -0.53
Msh3-201ENSMUST00000022220 Slc9c1Q6UJY2 1175 aa11.75□□□□□ -0.53
Msh3-201ENSMUST00000022220 Tcp10aQ80W76 438 aa11.75□□□□□ -0.53
Msh3-201ENSMUST00000022220 Atg4cQ811C2 458 aa11.75□□□□□ -0.53
Msh3-201ENSMUST00000022220 Phf20Q8BLG0 1010 aaKnown RBP11.75□□□□□ -0.53
Msh3-201ENSMUST00000022220 Vmn1r218Q8R261 298 aa11.75□□□□□ -0.53
Msh3-201ENSMUST00000022220 HlcsQ920N2 722 aa11.75□□□□□ -0.53
Msh3-201ENSMUST00000022220 Alg1Q921Q3 482 aa11.75□□□□□ -0.53
Msh3-201ENSMUST00000022220 Erp44Q9D1Q6 406 aa11.75□□□□□ -0.53
Msh3-201ENSMUST00000022220 Mboat4P0C7A3 435 aa11.75□□□□□ -0.53
Msh3-201ENSMUST00000022220 Calb1P12658 261 aa11.75□□□□□ -0.53
Msh3-201ENSMUST00000022220 Tmprss11aQ3UQ41 389 aa11.75□□□□□ -0.53
Msh3-201ENSMUST00000022220 Kctd19Q562E2 927 aa11.75□□□□□ -0.53
Msh3-201ENSMUST00000022220 Cyp26b1Q811W2 512 aa11.75□□□□□ -0.53
Msh3-201ENSMUST00000022220 E330017A01RikQ8BU47 192 aa11.75□□□□□ -0.53
Msh3-201ENSMUST00000022220 Pym1Q8CHP5 203 aaKnown RBP11.75□□□□□ -0.53
Msh3-201ENSMUST00000022220 C8aQ8K182 587 aa11.75□□□□□ -0.53
Msh3-201ENSMUST00000022220 Q8K2W9 541 aa11.75□□□□□ -0.53
Msh3-201ENSMUST00000022220 Tbx22Q8K402 517 aa11.75□□□□□ -0.53
Msh3-201ENSMUST00000022220 Chchd3Q9CRB9 227 aaKnown RBP11.75□□□□□ -0.53
Msh3-201ENSMUST00000022220 Fsip1Q9D3V5 435 aa11.75□□□□□ -0.53
Msh3-201ENSMUST00000022220 Eef1gQ9D8N0 437 aaKnown RBP11.75□□□□□ -0.53
Msh3-201ENSMUST00000022220 Ccdc182Q9D9C6 152 aa11.75□□□□□ -0.53
Msh3-201ENSMUST00000022220 Rabgef1Q9JM13 491 aa11.75□□□□□ -0.53
Msh3-201ENSMUST00000022220 Usp14Q9JMA1 493 aaKnown RBP11.75□□□□□ -0.53
Msh3-201ENSMUST00000022220 Serpinb8O08800 374 aaKnown RBP11.75□□□□□ -0.53
Msh3-201ENSMUST00000022220 CtshP49935 333 aa11.75□□□□□ -0.53
Msh3-201ENSMUST00000022220 Klrg2Q3UM83 387 aa11.75□□□□□ -0.53
Msh3-201ENSMUST00000022220 Cracr2aQ3UP38 310 aa11.75□□□□□ -0.53
Msh3-201ENSMUST00000022220 Lgr6Q3UVD5 967 aa11.75□□□□□ -0.53
Msh3-201ENSMUST00000022220 Trpc6Q61143 930 aa11.75□□□□□ -0.53
Msh3-201ENSMUST00000022220 Smarca1Q6PGB8 1046 aa11.75□□□□□ -0.53
Msh3-201ENSMUST00000022220 Lrrn2Q6PHP6 730 aa11.75□□□□□ -0.53
Msh3-201ENSMUST00000022220 Ddx42Q810A7 929 aaKnown RBP11.75□□□□□ -0.53
Msh3-201ENSMUST00000022220 Mrpl11Q9CQF0 192 aaKnown RBP11.75□□□□□ -0.53
Msh3-201ENSMUST00000022220 NagaQ9QWR8 415 aa11.75□□□□□ -0.53
Msh3-201ENSMUST00000022220 Atp8b5A3FIN4 1183 aa11.74□□□□□ -0.53
Msh3-201ENSMUST00000022220 Adam7O35227 789 aa11.74□□□□□ -0.53
Msh3-201ENSMUST00000022220 Pgrmc1O55022 195 aa11.74□□□□□ -0.53
Msh3-201ENSMUST00000022220 GpiP06745 558 aaKnown RBP11.74□□□□□ -0.53
Msh3-201ENSMUST00000022220 Mex3cQ05A36 652 aaKnown RBP11.74□□□□□ -0.53
Msh3-201ENSMUST00000022220 Dpcr1Q3TNW5 500 aa11.74□□□□□ -0.53
Msh3-201ENSMUST00000022220 Cyfip2Q5SQX6 1253 aa11.74□□□□□ -0.53
Msh3-201ENSMUST00000022220 Lrrc15Q80X72 579 aa11.74□□□□□ -0.53
Msh3-201ENSMUST00000022220 Bicd1Q8BR07 835 aa11.74□□□□□ -0.53
Msh3-201ENSMUST00000022220 Znf830Q8R1N0 363 aaKnown RBP11.74□□□□□ -0.53
Msh3-201ENSMUST00000022220 Txndc5Q91W90 417 aa11.74□□□□□ -0.53
Msh3-201ENSMUST00000022220 Tmem39aQ9CYC3 486 aa11.74□□□□□ -0.53
Msh3-201ENSMUST00000022220 Ddx25Q9QY15 484 aa11.74□□□□□ -0.53
Msh3-201ENSMUST00000022220 Kcnh2O35219 1162 aa11.74□□□□□ -0.53
Msh3-201ENSMUST00000022220 H2afzP0C0S6 128 aa11.74□□□□□ -0.53
Msh3-201ENSMUST00000022220 Dact3Q0PHV7 610 aa11.74□□□□□ -0.53
Msh3-201ENSMUST00000022220 H2afvQ3THW5 128 aa11.74□□□□□ -0.53
Msh3-201ENSMUST00000022220 Tab3Q571K4 716 aa11.74□□□□□ -0.53
Msh3-201ENSMUST00000022220 Ahcyl2Q68FL4 613 aaKnown RBP11.74□□□□□ -0.53
Msh3-201ENSMUST00000022220 Papd7Q6PB75 542 aa11.74□□□□□ -0.53
Msh3-201ENSMUST00000022220 Sulf1Q8K007 870 aa11.74□□□□□ -0.53
Msh3-201ENSMUST00000022220 NptxrQ99J85 493 aa11.74□□□□□ -0.53
Msh3-201ENSMUST00000022220 Cfap57Q9D180 1249 aa11.74□□□□□ -0.53
Msh3-201ENSMUST00000022220 IqcdQ9D3V1 458 aa11.74□□□□□ -0.53
Msh3-201ENSMUST00000022220 1700016D06RikQ9DAA5 166 aa11.74□□□□□ -0.53
Msh3-201ENSMUST00000022220 Jag1Q9QXX0 1218 aa11.74□□□□□ -0.53
Msh3-201ENSMUST00000022220 Hebp1Q9R257 190 aa11.74□□□□□ -0.53
Msh3-201ENSMUST00000022220 DgkkE9Q7N4 1118 aa11.74□□□□□ -0.53
Msh3-201ENSMUST00000022220 Krt13P08730 437 aa11.74□□□□□ -0.53
Retrieved 100 of 22,080 RNA–protein pairs in 12.7 ms