RNA–Protein interactions for RNA: ENSMUST00000004430.13

Clcn3-201, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,175 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-201ENSMUST00000004430 Vmn2r71L7N2D8 855 aa13.78□□□□□ -0.2
Clcn3-201ENSMUST00000004430 Serpina1bP22599 413 aa13.78□□□□□ -0.2
Clcn3-201ENSMUST00000004430 Tdo2P48776 406 aa13.78□□□□□ -0.2
Clcn3-201ENSMUST00000004430 S100bP50114 92 aa13.78□□□□□ -0.2
Clcn3-201ENSMUST00000004430 Setdb2Q8C267 713 aa13.78□□□□□ -0.2
Clcn3-201ENSMUST00000004430 Bst2Q8R2Q8 172 aa13.78□□□□□ -0.2
Clcn3-201ENSMUST00000004430 Arhgef7Q9ES28 862 aa13.78□□□□□ -0.2
Clcn3-201ENSMUST00000004430 Rcan1Q9JHG6 198 aa13.78□□□□□ -0.2
Clcn3-201ENSMUST00000004430 Klra10Q9R1G6 266 aa13.78□□□□□ -0.2
Clcn3-201ENSMUST00000004430 Mroh8E9PYI4 1049 aa13.78□□□□□ -0.2
Clcn3-201ENSMUST00000004430 Esr2O08537 530 aa13.78□□□□□ -0.2
Clcn3-201ENSMUST00000004430 Gbp8Q2V6D6 525 aa13.78□□□□□ -0.2
Clcn3-201ENSMUST00000004430 Arid3aQ62431 601 aa13.78□□□□□ -0.2
Clcn3-201ENSMUST00000004430 Tmem179Q8BHH9 233 aa13.78□□□□□ -0.2
Clcn3-201ENSMUST00000004430 Snx14Q8BHY8 964 aa13.78□□□□□ -0.2
Clcn3-201ENSMUST00000004430 Gcfc2Q8BKT3 769 aa13.78□□□□□ -0.2
Clcn3-201ENSMUST00000004430 Usp37Q8C0R0 979 aa13.78□□□□□ -0.2
Clcn3-201ENSMUST00000004430 Gbp7Q91Z40 638 aa13.78□□□□□ -0.2
Clcn3-201ENSMUST00000004430 Coa7Q921H9 231 aa13.78□□□□□ -0.2
Clcn3-201ENSMUST00000004430 Mad2l2Q9D752 211 aa13.78□□□□□ -0.2
Clcn3-201ENSMUST00000004430 Mrps9Q9D7N3 390 aaKnown RBP13.78□□□□□ -0.2
Clcn3-201ENSMUST00000004430 Hs6st3Q9QYK4 470 aa13.78□□□□□ -0.2
Clcn3-201ENSMUST00000004430 Nup62clA2AG10 272 aa13.77□□□□□ -0.2
Clcn3-201ENSMUST00000004430 D1Pas1P16381 660 aa13.77□□□□□ -0.2
Clcn3-201ENSMUST00000004430 Lrch1P62046 709 aa13.77□□□□□ -0.2
Clcn3-201ENSMUST00000004430 ItgaeQ60677 1167 aa13.77□□□□□ -0.2
Clcn3-201ENSMUST00000004430 Cd2bp2Q9CWK3 342 aaKnown RBP13.77□□□□□ -0.2
Clcn3-201ENSMUST00000004430 Riok3Q9DBU3 519 aaKnown RBP13.77□□□□□ -0.2
Clcn3-201ENSMUST00000004430 Nav1Q8CH77 1875 aa13.77□□□□□ -0.2
Clcn3-201ENSMUST00000004430 Gm8994E9PV04 411 aaKnown RBP13.77□□□□□ -0.21
Clcn3-201ENSMUST00000004430 Scgb2b19J3QM75 112 aa13.77□□□□□ -0.21
Clcn3-201ENSMUST00000004430 Prl2c2P04095 224 aa13.77□□□□□ -0.21
Clcn3-201ENSMUST00000004430 Fkbp1aP26883 108 aaKnown RBP13.77□□□□□ -0.21
Clcn3-201ENSMUST00000004430 Sec23aQ01405 765 aa13.77□□□□□ -0.21
Clcn3-201ENSMUST00000004430 Nap1l4Q78ZA7 375 aaKnown RBP13.77□□□□□ -0.21
Clcn3-201ENSMUST00000004430 Fbxo11Q7TPD1 930 aaKnown RBP13.77□□□□□ -0.21
Clcn3-201ENSMUST00000004430 Slc26a6Q8CIW6 758 aa13.77□□□□□ -0.21
Clcn3-201ENSMUST00000004430 Bbs7Q8K2G4 715 aa13.77□□□□□ -0.21
Clcn3-201ENSMUST00000004430 Atp6v1e2Q9D593 226 aa13.77□□□□□ -0.21
Clcn3-201ENSMUST00000004430 Pdzd4Q9QY39 772 aa13.77□□□□□ -0.21
Clcn3-201ENSMUST00000004430 Cdr1E9Q0B4 517 aa13.77□□□□□ -0.21
Clcn3-201ENSMUST00000004430 Calb1P12658 261 aa13.77□□□□□ -0.21
Clcn3-201ENSMUST00000004430 HpdP49429 393 aa13.77□□□□□ -0.21
Clcn3-201ENSMUST00000004430 Sorbs1Q62417 1290 aa13.77□□□□□ -0.21
Clcn3-201ENSMUST00000004430 Arhgef18Q6P9R4 1021 aa13.77□□□□□ -0.21
Clcn3-201ENSMUST00000004430 FtoQ8BGW1 502 aa13.77□□□□□ -0.21
Clcn3-201ENSMUST00000004430 Slf1Q8R3P9 1054 aa13.77□□□□□ -0.21
Clcn3-201ENSMUST00000004430 Drap1Q9D6N5 205 aa13.77□□□□□ -0.21
Clcn3-201ENSMUST00000004430 Gtf2ird1Q9JI57 1104 aaKnown RBP13.77□□□□□ -0.21
Clcn3-201ENSMUST00000004430 Tlr2Q9QUN7 784 aa13.77□□□□□ -0.21
Clcn3-201ENSMUST00000004430 Ror2Q9Z138 944 aa13.77□□□□□ -0.21
Clcn3-201ENSMUST00000004430 Ltbp4Q8K4G1 1666 aa13.77□□□□□ -0.21
Clcn3-201ENSMUST00000004430 Gm45194A0A140LJG2 572 aa13.76□□□□□ -0.21
Clcn3-201ENSMUST00000004430 Eps15P42567 897 aa13.76□□□□□ -0.21
Clcn3-201ENSMUST00000004430 Cnnm4Q69ZF7 771 aa13.76□□□□□ -0.21
Clcn3-201ENSMUST00000004430 Ccdc15Q8C9M2 810 aa13.76□□□□□ -0.21
Clcn3-201ENSMUST00000004430 Pex19Q8VCI5 299 aa13.76□□□□□ -0.21
Clcn3-201ENSMUST00000004430 Psmd2Q8VDM4 908 aa13.76□□□□□ -0.21
Clcn3-201ENSMUST00000004430 Cep83Q9D5R3 692 aa13.76□□□□□ -0.21
Clcn3-201ENSMUST00000004430 Pdcd7Q9WTY1 482 aa13.76□□□□□ -0.21
Clcn3-201ENSMUST00000004430 Noc2lQ9WV70 747 aaKnown RBP13.76□□□□□ -0.21
Clcn3-201ENSMUST00000004430 Adcy7P51829 1099 aa13.76□□□□□ -0.21
Clcn3-201ENSMUST00000004430 Sparcl1P70663 650 aa13.76□□□□□ -0.21
Clcn3-201ENSMUST00000004430 Galnt17Q7TT15 598 aa13.76□□□□□ -0.21
Clcn3-201ENSMUST00000004430 PreplQ8C167 725 aa13.76□□□□□ -0.21
Clcn3-201ENSMUST00000004430 Fam118bQ8C569 351 aa13.76□□□□□ -0.21
Clcn3-201ENSMUST00000004430 Myef2Q8C854 591 aaKnown RBP13.76□□□□□ -0.21
Clcn3-201ENSMUST00000004430 Lrrc8cQ8R502 803 aa13.76□□□□□ -0.21
Clcn3-201ENSMUST00000004430 Ube2sQ921J4 223 aa13.76□□□□□ -0.21
Clcn3-201ENSMUST00000004430 Rhobtb3Q9CTN4 611 aa13.76□□□□□ -0.21
Clcn3-201ENSMUST00000004430 Ybx3Q9JKB3 361 aaKnown RBP13.76□□□□□ -0.21
Clcn3-201ENSMUST00000004430 Ssc5dQ8BV57 1371 aa13.76□□□□□ -0.21
Clcn3-201ENSMUST00000004430 Arhgap42B2RQE8 841 aa13.76□□□□□ -0.21
Clcn3-201ENSMUST00000004430 4933406M09RikG3XA12 479 aa13.76□□□□□ -0.21
Clcn3-201ENSMUST00000004430 Fam81aQ3UXZ6 364 aa13.76□□□□□ -0.21
Clcn3-201ENSMUST00000004430 Tnni3kQ5GIG6 834 aa13.76□□□□□ -0.21
Clcn3-201ENSMUST00000004430 Ddx3xQ62167 662 aaKnown RBP13.76□□□□□ -0.21
Clcn3-201ENSMUST00000004430 Baiap3Q80TT2 1134 aa13.76□□□□□ -0.21
Clcn3-201ENSMUST00000004430 Usp38Q8BW70 1042 aa13.76□□□□□ -0.21
Clcn3-201ENSMUST00000004430 Trim68Q8K243 485 aa13.76□□□□□ -0.21
Clcn3-201ENSMUST00000004430 Osbpl9A2A8Z1 736 aa13.75□□□□□ -0.21
Clcn3-201ENSMUST00000004430 Spata18Q0P557 537 aa13.75□□□□□ -0.21
Clcn3-201ENSMUST00000004430 Zc3h18Q0P678 948 aaKnown RBP13.75□□□□□ -0.21
Clcn3-201ENSMUST00000004430 Pnma5Q5DTT8 618 aa13.75□□□□□ -0.21
Clcn3-201ENSMUST00000004430 Ccdc169Q8BXX9 214 aa13.75□□□□□ -0.21
Clcn3-201ENSMUST00000004430 Stap2Q8R0L1 411 aa13.75□□□□□ -0.21
Clcn3-201ENSMUST00000004430 Pcdha5Q91Y15 934 aa13.75□□□□□ -0.21
Clcn3-201ENSMUST00000004430 Krt20Q9D312 431 aa13.75□□□□□ -0.21
Clcn3-201ENSMUST00000004430 Fbxo3Q9DC63 480 aa13.75□□□□□ -0.21
Clcn3-201ENSMUST00000004430 EnahQ03173 802 aa13.75□□□□□ -0.21
Clcn3-201ENSMUST00000004430 Ect2Q07139 913 aa13.75□□□□□ -0.21
Clcn3-201ENSMUST00000004430 Eepd1Q3TGW2 569 aa13.75□□□□□ -0.21
Clcn3-201ENSMUST00000004430 Tom1l2Q5SRX1 507 aa13.75□□□□□ -0.21
Clcn3-201ENSMUST00000004430 Ppp2r5eQ61151 467 aa13.75□□□□□ -0.21
Clcn3-201ENSMUST00000004430 Tmem132dQ76HP3 1097 aa13.75□□□□□ -0.21
Clcn3-201ENSMUST00000004430 Sgsm1Q8BPQ7 1093 aa13.75□□□□□ -0.21
Clcn3-201ENSMUST00000004430 OscarQ8VBT3 265 aa13.75□□□□□ -0.21
Clcn3-201ENSMUST00000004430 Trim10Q9WUH5 489 aa13.75□□□□□ -0.21
Clcn3-201ENSMUST00000004430 CluhQ5SW19 1315 aa13.75□□□□□ -0.21
Clcn3-201ENSMUST00000004430 Gm28360A0A087WR25 190 aa13.75□□□□□ -0.21
Retrieved 100 of 22,080 RNA–protein pairs in 41.2 ms