RNA–Protein interactions for RNA: YOL142W

RRP40, Transcript of Exosome non-catalytic core component, yeastyeast

Gene RRP40, Length 723 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRP40YOL142W ELP2P42935 788 aa4.44□□□□□ -1.7
RRP40YOL142W YFL064CP43540 174 aa4.44□□□□□ -1.7
RRP40YOL142W GWT1P47026 490 aa4.44□□□□□ -1.7
RRP40YOL142W WSC2P53832 503 aa4.44□□□□□ -1.7
RRP40YOL142W ELP3Q02908 557 aaKnown RBP4.44□□□□□ -1.7
RRP40YOL142W YDR239CQ03780 787 aa4.44□□□□□ -1.7
RRP40YOL142W SPG3Q04398 127 aaPredicted RBP4.44□□□□□ -1.7
RRP40YOL142W KAP95Q06142 861 aaKnown RBP4.44□□□□□ -1.7
RRP40YOL142W YDL007C-AQ2V2Q0 85 aa4.44□□□□□ -1.7
RRP40YOL142W YBL111CQ3E7Y5 667 aa4.44□□□□□ -1.7
RRP40YOL142W BRR1Q99177 341 aaPredicted RBP4.44□□□□□ -1.7
RRP40YOL142W ATP11P32453 318 aa4.43□□□□□ -1.7
RRP40YOL142W SRB4P32569 687 aa4.43□□□□□ -1.7
RRP40YOL142W YOX1P34161 385 aa4.43□□□□□ -1.7
RRP40YOL142W YKL097CP34245 136 aa4.43□□□□□ -1.7
RRP40YOL142W YBR139WP38109 508 aa4.43□□□□□ -1.7
RRP40YOL142W MMS21P38632 267 aa4.43□□□□□ -1.7
RRP40YOL142W PEX31P53203 462 aa4.43□□□□□ -1.7
RRP40YOL142W JJJ1P53863 590 aa4.43□□□□□ -1.7
RRP40YOL142W KTR6P54070 446 aa4.43□□□□□ -1.7
RRP40YOL142W YOR387CQ08910 206 aa4.43□□□□□ -1.7
RRP40YOL142W SEC39Q12745 709 aa4.43□□□□□ -1.7
RRP40YOL142W STT4P37297 1900 aa4.42□□□□□ -1.7
RRP40YOL142W PAB1P04147 577 aaKnown RBP RIP-Chip data4.42□□□□□ -1.7 RIP-Chip
RRP40YOL142W RPL31BP0C2H9 113 aaKnown RBP4.42□□□□□ -1.7
RRP40YOL142W REV1P12689 985 aa4.42□□□□□ -1.7
RRP40YOL142W MET16P18408 261 aaPredicted RBP4.42□□□□□ -1.7
RRP40YOL142W RNA14P25298 677 aaKnown RBP4.42□□□□□ -1.7
RRP40YOL142W YBP1P38315 674 aa4.42□□□□□ -1.7
RRP40YOL142W SMF1P38925 575 aa4.42□□□□□ -1.7
RRP40YOL142W END3P39013 349 aa4.42□□□□□ -1.7
RRP40YOL142W YNL247WP53852 767 aaKnown RBP4.42□□□□□ -1.7
RRP40YOL142W YNL040WP53960 456 aaPredicted RBP4.42□□□□□ -1.7
RRP40YOL142W YMR114CQ04471 368 aaKnown RBP4.42□□□□□ -1.7
RRP40YOL142W RSA1Q08932 381 aa4.42□□□□□ -1.7
RRP40YOL142W YCL021W-AQ96VH3 125 aa4.42□□□□□ -1.7
RRP40YOL142W IZH4Q99393 312 aa4.42□□□□□ -1.7
RRP40YOL142W BUB3P26449 341 aa4.41□□□□□ -1.7
RRP40YOL142W HXT3P32466 567 aaKnown RBP4.41□□□□□ -1.7
RRP40YOL142W COY1P34237 679 aa4.41□□□□□ -1.7
RRP40YOL142W KAP104P38217 918 aaKnown RBP4.41□□□□□ -1.7
RRP40YOL142W PRM9P39551 298 aa4.41□□□□□ -1.7
RRP40YOL142W SYG1P40528 902 aa4.41□□□□□ -1.7
RRP40YOL142W RRT5P43607 289 aa4.41□□□□□ -1.7
RRP40YOL142W MSO1P53604 210 aaKnown RBP4.41□□□□□ -1.7
RRP40YOL142W GRX8Q05926 109 aa4.41□□□□□ -1.7
RRP40YOL142W YDR018CQ12185 396 aa4.41□□□□□ -1.7
RRP40YOL142W GPM3Q12326 303 aa4.41□□□□□ -1.7
RRP40YOL142W ARG3P05150 338 aa4.4□□□□□ -1.71
RRP40YOL142W PMR1P13586 950 aa4.4□□□□□ -1.71
RRP40YOL142W MEI4P29467 408 aa4.4□□□□□ -1.71
RRP40YOL142W GCG1P32656 232 aaKnown RBP4.4□□□□□ -1.71
RRP40YOL142W SWE1P32944 819 aa4.4□□□□□ -1.71
RRP40YOL142W ATG12P38316 186 aa4.4□□□□□ -1.71
RRP40YOL142W AIM18P38884 321 aa4.4□□□□□ -1.71
RRP40YOL142W EDC3P39998 551 aaKnown RBP4.4□□□□□ -1.71
RRP40YOL142W FAU1P40099 211 aa4.4□□□□□ -1.71
RRP40YOL142W POP1P41812 875 aa4.4□□□□□ -1.71
RRP40YOL142W UFE1P41834 346 aa4.4□□□□□ -1.71
RRP40YOL142W YJR079WP47126 109 aa4.4□□□□□ -1.71
RRP40YOL142W TWF1P53250 332 aa4.4□□□□□ -1.71
RRP40YOL142W CWC22P53333 577 aaKnown RBP4.4□□□□□ -1.71
RRP40YOL142W MAL13P53338 473 aa4.4□□□□□ -1.71
RRP40YOL142W TRM112P53738 135 aaPredicted RBP4.4□□□□□ -1.71
RRP40YOL142W URH1Q04179 340 aa4.4□□□□□ -1.71
RRP40YOL142W RTN1Q04947 295 aaKnown RBP4.4□□□□□ -1.71
RRP40YOL142W HNT3Q08702 217 aa4.4□□□□□ -1.71
RRP40YOL142W FMP27Q06179 2628 aa4.4□□□□□ -1.71
RRP40YOL142W YEL043WP32618 956 aa4.39□□□□□ -1.71
RRP40YOL142W SGE1P33335 543 aa4.39□□□□□ -1.71
RRP40YOL142W FRE2P36033 711 aa4.39□□□□□ -1.71
RRP40YOL142W MSG5P38590 489 aa4.39□□□□□ -1.71
RRP40YOL142W URA8P38627 578 aaPredicted RBP4.39□□□□□ -1.71
RRP40YOL142W MKT1P40850 830 aaKnown RBP4.39□□□□□ -1.71
RRP40YOL142W YPI1P43587 155 aa4.39□□□□□ -1.71
RRP40YOL142W RPC17P47076 161 aa4.39□□□□□ -1.71
RRP40YOL142W YML6P51998 286 aa4.39□□□□□ -1.71
RRP40YOL142W INP2Q03824 705 aa4.39□□□□□ -1.71
RRP40YOL142W VTI1Q04338 217 aa4.39□□□□□ -1.71
RRP40YOL142W TOR2P32600 2474 aaKnown RBP4.39□□□□□ -1.71
RRP40YOL142W HIS1P00498 297 aaKnown RBP4.38□□□□□ -1.71
RRP40YOL142W RPS14AP06367 137 aaKnown RBP4.38□□□□□ -1.71
RRP40YOL142W SLY1P22213 666 aa4.38□□□□□ -1.71
RRP40YOL142W AAT2P23542 418 aaKnown RBP4.38□□□□□ -1.71
RRP40YOL142W FUN19P28003 413 aaPredicted RBP4.38□□□□□ -1.71
RRP40YOL142W SDS24P38314 527 aa4.38□□□□□ -1.71
RRP40YOL142W MED6P38782 295 aa4.38□□□□□ -1.71
RRP40YOL142W RPS14BP39516 138 aaKnown RBP4.38□□□□□ -1.71
RRP40YOL142W HEM14P40012 539 aa4.38□□□□□ -1.71
RRP40YOL142W YMR134WP40207 237 aa4.38□□□□□ -1.71
RRP40YOL142W ATM1P40416 690 aa4.38□□□□□ -1.71
RRP40YOL142W CHS6P40955 746 aa4.38□□□□□ -1.71
RRP40YOL142W URB2P47108 1174 aa4.38□□□□□ -1.71
RRP40YOL142W TCB2P48231 1178 aa4.38□□□□□ -1.71
RRP40YOL142W OCA1P50946 238 aaPredicted RBP4.38□□□□□ -1.71
RRP40YOL142W VPS9P54787 451 aa4.38□□□□□ -1.71
RRP40YOL142W RPL22BP56628 122 aaKnown RBP4.38□□□□□ -1.71
RRP40YOL142W ATG29Q12092 213 aa4.38□□□□□ -1.71
RRP40YOL142W OCA6Q12454 224 aa4.38□□□□□ -1.71
RRP40YOL142W GPI10P30777 616 aa4.37□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 20.4 ms