RNA–Protein interactions for RNA: YKR001C

VPS1, Transcript of Dynamin-like GTPase required for vacuolar sorting, yeastyeast

Gene VPS1, Length 2,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS1YKR001C CSM1P25651 190 aa5.22□□□□□ -1.57
VPS1YKR001C SIP1P32578 815 aa5.22□□□□□ -1.57
VPS1YKR001C SPR1P32603 445 aa5.22□□□□□ -1.57
VPS1YKR001C DUG2P38149 878 aa5.22□□□□□ -1.57
VPS1YKR001C FMP23P38231 175 aa5.22□□□□□ -1.57
VPS1YKR001C SHE3P38272 425 aaKnown RBP5.22□□□□□ -1.57
VPS1YKR001C BIT2P38346 545 aa5.22□□□□□ -1.57
VPS1YKR001C RFC2P40348 353 aa5.22□□□□□ -1.57
VPS1YKR001C GDS1P41913 522 aa5.22□□□□□ -1.57
VPS1YKR001C YAR1P46683 200 aa5.22□□□□□ -1.57
VPS1YKR001C BIR1P47134 954 aa5.22□□□□□ -1.57
VPS1YKR001C SAM37P50110 327 aa5.22□□□□□ -1.57
VPS1YKR001C YGR066CP53242 292 aa5.22□□□□□ -1.57
VPS1YKR001C STP1Q00947 519 aa5.22□□□□□ -1.57
VPS1YKR001C YMR210WQ03649 449 aa5.22□□□□□ -1.57
VPS1YKR001C TRM82Q03774 444 aa5.22□□□□□ -1.57
VPS1YKR001C BLS1Q06071 122 aa5.22□□□□□ -1.57
VPS1YKR001C HDA2Q06629 674 aa5.22□□□□□ -1.57
VPS1YKR001C YNG1Q08465 219 aa5.22□□□□□ -1.57
VPS1YKR001C EFG1Q3E705 233 aaKnown RBP5.22□□□□□ -1.57
VPS1YKR001C PET20Q99373 253 aa5.22□□□□□ -1.57
VPS1YKR001C CDC6P09119 513 aa5.21□□□□□ -1.57
VPS1YKR001C PHO13P19881 312 aa5.21□□□□□ -1.57
VPS1YKR001C RBK1P25332 333 aa5.21□□□□□ -1.57
VPS1YKR001C TRK2P28584 889 aa5.21□□□□□ -1.57
VPS1YKR001C AAR2P32357 355 aaPredicted RBP5.21□□□□□ -1.57
VPS1YKR001C MNS1P32906 549 aa5.21□□□□□ -1.57
VPS1YKR001C TRM2P33753 639 aa5.21□□□□□ -1.57
VPS1YKR001C MCX1P38323 520 aaPredicted RBP5.21□□□□□ -1.57
VPS1YKR001C MED6P38782 295 aa5.21□□□□□ -1.57
VPS1YKR001C UBP5P39944 805 aa5.21□□□□□ -1.57
VPS1YKR001C DOC1P53068 250 aa5.21□□□□□ -1.57
VPS1YKR001C YGR017WP53210 297 aa5.21□□□□□ -1.57
VPS1YKR001C ARK1P53974 638 aa5.21□□□□□ -1.57
VPS1YKR001C OPI10Q08202 246 aa5.21□□□□□ -1.57
VPS1YKR001C LEA1Q08963 238 aaPredicted RBP5.21□□□□□ -1.57
VPS1YKR001C RGS2Q99188 309 aa5.21□□□□□ -1.57
VPS1YKR001C SCH9P11792 824 aaKnown RBP5.21□□□□□ -1.58
VPS1YKR001C SEC65P29478 273 aa5.21□□□□□ -1.58
VPS1YKR001C NDC1P32500 655 aa5.21□□□□□ -1.58
VPS1YKR001C SCM4P32564 187 aa5.21□□□□□ -1.58
VPS1YKR001C IMP3P32899 183 aaPredicted RBP5.21□□□□□ -1.58
VPS1YKR001C BDH1P39714 382 aa5.21□□□□□ -1.58
VPS1YKR001C FAU1P40099 211 aa5.21□□□□□ -1.58
VPS1YKR001C ARH1P48360 493 aa5.21□□□□□ -1.58
VPS1YKR001C GET1P53192 235 aa5.21□□□□□ -1.58
VPS1YKR001C ACL4Q03771 387 aa5.21□□□□□ -1.58
VPS1YKR001C SNU56Q03782 492 aaKnown RBP5.21□□□□□ -1.58
VPS1YKR001C TMN2Q04562 672 aa5.21□□□□□ -1.58
VPS1YKR001C YLR040CQ07988 224 aa5.21□□□□□ -1.58
VPS1YKR001C YPR063CQ12160 140 aa5.21□□□□□ -1.58
VPS1YKR001C YOR304C-AO14468 76 aa5.2□□□□□ -1.58
VPS1YKR001C RPL27AP0C2H6 136 aaKnown RBP5.2□□□□□ -1.58
VPS1YKR001C RPL27BP0C2H7 136 aaKnown RBP5.2□□□□□ -1.58
VPS1YKR001C FRS2P15625 503 aaKnown RBP5.2□□□□□ -1.58
VPS1YKR001C FAA1P30624 700 aaKnown RBP5.2□□□□□ -1.58
VPS1YKR001C SAC6P32599 642 aaKnown RBP5.2□□□□□ -1.58
VPS1YKR001C MCH2P36032 473 aa5.2□□□□□ -1.58
VPS1YKR001C MRPL3P36516 390 aa5.2□□□□□ -1.58
VPS1YKR001C MNN9P39107 395 aaKnown RBP5.2□□□□□ -1.58
VPS1YKR001C QDR1P40475 563 aa5.2□□□□□ -1.58
VPS1YKR001C LYS20P48570 428 aaKnown RBP5.2□□□□□ -1.58
VPS1YKR001C COG5P53951 403 aa5.2□□□□□ -1.58
VPS1YKR001C GPD1Q00055 391 aaKnown RBP5.2□□□□□ -1.58
VPS1YKR001C RIM13Q03792 727 aa5.2□□□□□ -1.58
VPS1YKR001C YDR109CQ04585 715 aa5.2□□□□□ -1.58
VPS1YKR001C YDL086WQ07505 273 aa5.2□□□□□ -1.58
VPS1YKR001C SHS1Q07657 551 aa5.2□□□□□ -1.58
VPS1YKR001C CRT10Q08226 957 aa5.2□□□□□ -1.58
VPS1YKR001C GPM3Q12326 303 aa5.2□□□□□ -1.58
VPS1YKR001C PSF1Q12488 208 aa5.2□□□□□ -1.58
VPS1YKR001C CDC28P00546 298 aaKnown RBP5.2□□□□□ -1.58
VPS1YKR001C REV1P12689 985 aa5.2□□□□□ -1.58
VPS1YKR001C RNA14P25298 677 aaKnown RBP5.2□□□□□ -1.58
VPS1YKR001C MVD1P32377 396 aaKnown RBP5.2□□□□□ -1.58
VPS1YKR001C YSC83P32792 385 aa5.2□□□□□ -1.58
VPS1YKR001C LST4P34239 828 aa5.2□□□□□ -1.58
VPS1YKR001C YKL070WP36087 169 aa5.2□□□□□ -1.58
VPS1YKR001C SPC34P36131 295 aa5.2□□□□□ -1.58
VPS1YKR001C ARA1P38115 344 aa5.2□□□□□ -1.58
VPS1YKR001C DTR1P38125 572 aa5.2□□□□□ -1.58
VPS1YKR001C HSL7P38274 827 aa5.2□□□□□ -1.58
VPS1YKR001C BUR6P40096 142 aa5.2□□□□□ -1.58
VPS1YKR001C FMC1P40491 155 aa5.2□□□□□ -1.58
VPS1YKR001C MAM33P40513 266 aa5.2□□□□□ -1.58
VPS1YKR001C SHR5P41912 237 aa5.2□□□□□ -1.58
VPS1YKR001C YJL132WP47014 750 aa5.2□□□□□ -1.58
VPS1YKR001C IMA1P53051 589 aa5.2□□□□□ -1.58
VPS1YKR001C PNC1P53184 216 aaKnown RBP5.2□□□□□ -1.58
VPS1YKR001C SWC4P53201 476 aa5.2□□□□□ -1.58
VPS1YKR001C YGR026WP53217 278 aa5.2□□□□□ -1.58
VPS1YKR001C NQM1P53228 333 aaPredicted RBP5.2□□□□□ -1.58
VPS1YKR001C UTP6Q02354 440 aaKnown RBP5.2□□□□□ -1.58
VPS1YKR001C DYN2Q02647 92 aa5.2□□□□□ -1.58
VPS1YKR001C MSC1Q03104 513 aa5.2□□□□□ -1.58
VPS1YKR001C EKI1Q03764 534 aa5.2□□□□□ -1.58
VPS1YKR001C MTQ2Q03920 221 aaPredicted RBP5.2□□□□□ -1.58
VPS1YKR001C MUS81Q04149 632 aaPredicted RBP5.2□□□□□ -1.58
VPS1YKR001C YLR407WQ06070 228 aa5.2□□□□□ -1.58
VPS1YKR001C CUR1Q06469 252 aa5.2□□□□□ -1.58
Retrieved 100 of 5,963 RNA–protein pairs in 8.9 ms