RNA–Protein interactions for RNA: YJR001W

AVT1, Transcript of Vacuolar transporter, yeast

Gene AVT1, Length 1,809 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
AVT1	YJR001W	YNG2	P38806	282 aa	Known RBP	4.23	□□□□□ -1.73
AVT1	YJR001W	PRK1	P40494	810 aa		4.23	□□□□□ -1.73
AVT1	YJR001W	MTR3	P48240	250 aa	Predicted RBP	4.23	□□□□□ -1.73
AVT1	YJR001W	YIP5	P53108	310 aa		4.23	□□□□□ -1.73
AVT1	YJR001W	MTG1	Q03151	367 aa	Predicted RBP	4.23	□□□□□ -1.73
AVT1	YJR001W	CAB5	Q03941	241 aa		4.23	□□□□□ -1.73
AVT1	YJR001W	MUS81	Q04149	632 aa	Predicted RBP	4.23	□□□□□ -1.73
AVT1	YJR001W	GLO2	Q05584	274 aa		4.23	□□□□□ -1.73
AVT1	YJR001W	COA4	Q05809	96 aa		4.23	□□□□□ -1.73
AVT1	YJR001W	YAP7	Q08182	245 aa		4.23	□□□□□ -1.73
AVT1	YJR001W	UIP4	Q08926	304 aa		4.23	□□□□□ -1.73
AVT1	YJR001W	ATG31	Q12421	196 aa		4.23	□□□□□ -1.73
AVT1	YJR001W	FMP16	Q12497	93 aa		4.23	□□□□□ -1.73
AVT1	YJR001W	DCP1	Q12517	231 aa	Predicted RBP	4.23	□□□□□ -1.73
AVT1	YJR001W	CHO2	P05374	869 aa	Known RBP	4.23	□□□□□ -1.73
AVT1	YJR001W	COS2	P0CX12	379 aa		4.23	□□□□□ -1.73
AVT1	YJR001W	COS3	P0CX13	379 aa		4.23	□□□□□ -1.73
AVT1	YJR001W	SDH2	P21801	266 aa		4.23	□□□□□ -1.73
AVT1	YJR001W	MSS1	P32559	526 aa	Predicted RBP	4.23	□□□□□ -1.73
AVT1	YJR001W	NNK1	P36003	928 aa		4.23	□□□□□ -1.73
AVT1	YJR001W	GLY1	P37303	387 aa	Known RBP	4.23	□□□□□ -1.73
AVT1	YJR001W	SPP381	P38282	291 aa	Predicted RBP	4.23	□□□□□ -1.73
AVT1	YJR001W	SPC97	P38863	823 aa		4.23	□□□□□ -1.73
AVT1	YJR001W	RGI1	P40043	161 aa	Predicted RBP	4.23	□□□□□ -1.73
AVT1	YJR001W	YNL195C	P40168	261 aa		4.23	□□□□□ -1.73
AVT1	YJR001W	VHS2	P40463	436 aa		4.23	□□□□□ -1.73
AVT1	YJR001W	PSA1	P41940	361 aa	Known RBP	4.23	□□□□□ -1.73
AVT1	YJR001W	COS4	P43542	379 aa		4.23	□□□□□ -1.73
AVT1	YJR001W	FAR7	P43592	221 aa		4.23	□□□□□ -1.73
AVT1	YJR001W	IDS2	P46958	469 aa		4.23	□□□□□ -1.73
AVT1	YJR001W	YHC3	P47040	408 aa		4.23	□□□□□ -1.73
AVT1	YJR001W	DIA3	P52290	468 aa		4.23	□□□□□ -1.73
AVT1	YJR001W	ARI1	P53111	347 aa	Known RBP	4.23	□□□□□ -1.73
AVT1	YJR001W	PKP2	P53170	491 aa		4.23	□□□□□ -1.73
AVT1	YJR001W	SOK2	P53438	785 aa	Predicted RBP	4.23	□□□□□ -1.73
AVT1	YJR001W	ORC3	P54790	616 aa		4.23	□□□□□ -1.73
AVT1	YJR001W	SDH1	Q00711	640 aa		4.23	□□□□□ -1.73
AVT1	YJR001W	SLU7	Q02775	382 aa	Known RBP	4.23	□□□□□ -1.73
AVT1	YJR001W	SSY1	Q03770	852 aa		4.23	□□□□□ -1.73
AVT1	YJR001W	RRP45	Q05636	305 aa	Known RBP	4.23	□□□□□ -1.73
AVT1	YJR001W	FAR10	Q06001	478 aa		4.23	□□□□□ -1.73
AVT1	YJR001W	CDD1	Q06549	142 aa		4.23	□□□□□ -1.73
AVT1	YJR001W	CDA1	Q06702	301 aa		4.23	□□□□□ -1.73
AVT1	YJR001W	BSC6	Q08280	497 aa		4.23	□□□□□ -1.73
AVT1	YJR001W	GEP3	Q08622	556 aa		4.23	□□□□□ -1.73
AVT1	YJR001W	CSM4	Q08955	156 aa		4.23	□□□□□ -1.73
AVT1	YJR001W	PAA1	Q12447	191 aa	Known RBP	4.23	□□□□□ -1.73
AVT1	YJR001W	AGC1	Q12482	902 aa		4.23	□□□□□ -1.73
AVT1	YJR001W	AI5_BETA	Q9ZZX0	354 aa		4.23	□□□□□ -1.73
AVT1	YJR001W	DST1	P07273	309 aa		4.22	□□□□□ -1.73
AVT1	YJR001W	RPL27A	P0C2H6	136 aa	Known RBP	4.22	□□□□□ -1.73
AVT1	YJR001W	RPL27B	P0C2H7	136 aa	Known RBP	4.22	□□□□□ -1.73
AVT1	YJR001W	PEP5	P12868	1029 aa		4.22	□□□□□ -1.73
AVT1	YJR001W	ERS1	P17261	260 aa		4.22	□□□□□ -1.73
AVT1	YJR001W	AIM17	P23180	465 aa	Known RBP	4.22	□□□□□ -1.73
AVT1	YJR001W	CNB1	P25296	175 aa		4.22	□□□□□ -1.73
AVT1	YJR001W	RBK1	P25332	333 aa		4.22	□□□□□ -1.73
AVT1	YJR001W	DAL2	P25335	343 aa		4.22	□□□□□ -1.73
AVT1	YJR001W	YCP4	P25349	247 aa	Known RBP	4.22	□□□□□ -1.73
AVT1	YJR001W	ADH7	P25377	361 aa		4.22	□□□□□ -1.73
AVT1	YJR001W	MGR1	P25573	417 aa		4.22	□□□□□ -1.73
AVT1	YJR001W	SPR1	P32603	445 aa		4.22	□□□□□ -1.73
AVT1	YJR001W	MNS1	P32906	549 aa		4.22	□□□□□ -1.73
AVT1	YJR001W	SNU114	P36048	1008 aa	Known RBP	4.22	□□□□□ -1.73
AVT1	YJR001W	ANR2	P36090	516 aa	Predicted RBP	4.22	□□□□□ -1.73
AVT1	YJR001W	ICS2	P38284	255 aa		4.22	□□□□□ -1.73
AVT1	YJR001W	ECM10	P39987	644 aa		4.22	□□□□□ -1.73
AVT1	YJR001W	CDC40	P40968	455 aa	Predicted RBP	4.22	□□□□□ -1.73
AVT1	YJR001W	SAD1	P43589	448 aa		4.22	□□□□□ -1.73
AVT1	YJR001W	IRC8	P47046	822 aa		4.22	□□□□□ -1.73
AVT1	YJR001W	JHD2	P47156	728 aa	Predicted RBP	4.22	□□□□□ -1.73
AVT1	YJR001W	TAF6	P53040	516 aa		4.22	□□□□□ -1.73
AVT1	YJR001W	ZPR1	P53303	486 aa	Known RBP	4.22	□□□□□ -1.73
AVT1	YJR001W	COS6	P53344	381 aa		4.22	□□□□□ -1.73
AVT1	YJR001W	PRP38	Q00723	242 aa	Predicted RBP	4.22	□□□□□ -1.73
AVT1	YJR001W	MSC2	Q03455	724 aa		4.22	□□□□□ -1.73
AVT1	YJR001W	ENT5	Q03769	411 aa	Known RBP	4.22	□□□□□ -1.73
AVT1	YJR001W	YMR130W	Q04223	302 aa		4.22	□□□□□ -1.73
AVT1	YJR001W	YDR222W	Q04925	415 aa		4.22	□□□□□ -1.73
AVT1	YJR001W	YMR226C	Q05016	267 aa	Known RBP	4.22	□□□□□ -1.73
AVT1	YJR001W	YLR283W	Q05867	314 aa		4.22	□□□□□ -1.73
AVT1	YJR001W	CTS2	Q06350	511 aa		4.22	□□□□□ -1.73
AVT1	YJR001W	CRT10	Q08226	957 aa		4.22	□□□□□ -1.73
AVT1	YJR001W	YOL075C	Q08234	1294 aa		4.22	□□□□□ -1.73
AVT1	YJR001W	SGT1	Q08446	395 aa		4.22	□□□□□ -1.73
AVT1	YJR001W	ALE1	Q08548	619 aa		4.22	□□□□□ -1.73
AVT1	YJR001W	RAX1	Q08760	435 aa		4.22	□□□□□ -1.73
AVT1	YJR001W	GRE1	Q08969	168 aa		4.22	□□□□□ -1.73
AVT1	YJR001W	YOR012W	Q12351	137 aa		4.22	□□□□□ -1.73
AVT1	YJR001W	SNF8	Q12483	233 aa		4.22	□□□□□ -1.73
AVT1	YJR001W	WIP1	Q2V2P8	89 aa		4.22	□□□□□ -1.73
AVT1	YJR001W	CDC8	P00572	216 aa		4.21	□□□□□ -1.74
AVT1	YJR001W	RPS19A	P07280	144 aa	Known RBP	4.21	□□□□□ -1.74
AVT1	YJR001W	RPS19B	P07281	144 aa	Predicted RBP	4.21	□□□□□ -1.74
AVT1	YJR001W	MET2	P08465	486 aa		4.21	□□□□□ -1.74
AVT1	YJR001W	NFT1	P0CE68	1218 aa		4.21	□□□□□ -1.74
AVT1	YJR001W	MAS1	P10507	462 aa		4.21	□□□□□ -1.74
AVT1	YJR001W	SEC12	P11655	471 aa		4.21	□□□□□ -1.74
AVT1	YJR001W	PET9	P18239	318 aa	Known RBP	4.21	□□□□□ -1.74
AVT1	YJR001W	URE2	P23202	354 aa	Known RBP	4.21	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 27.1 ms