RNA–Protein interactions for RNA: YBR135W

CKS1, Transcript of Cyclin-dependent protein kinase regulatory subunit and adaptor, yeastyeast

Gene CKS1, Length 453 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CKS1YBR135W QDR3P38227 689 aa4.4□□□□□ -1.71
CKS1YBR135W WSS1P38838 269 aa4.4□□□□□ -1.71
CKS1YBR135W FAA2P39518 744 aa4.4□□□□□ -1.71
CKS1YBR135W IDP2P41939 412 aa4.4□□□□□ -1.71
CKS1YBR135W RPL6AQ02326 176 aaKnown RBP4.4□□□□□ -1.71
CKS1YBR135W STD1Q02794 444 aa4.4□□□□□ -1.71
CKS1YBR135W MMT1Q03218 510 aa4.4□□□□□ -1.71
CKS1YBR135W YMR181CQ03231 154 aa4.4□□□□□ -1.71
CKS1YBR135W RRP9Q06506 573 aaKnown RBP4.4□□□□□ -1.71
CKS1YBR135W YFH1Q07540 174 aa4.4□□□□□ -1.71
CKS1YBR135W CUE5Q08412 411 aaKnown RBP4.4□□□□□ -1.71
CKS1YBR135W RIM15P43565 1770 aa4.4□□□□□ -1.71
CKS1YBR135W CDC21P06785 304 aa4.39□□□□□ -1.71
CKS1YBR135W DST1P07273 309 aa4.39□□□□□ -1.71
CKS1YBR135W NFT1P0CE68 1218 aa4.39□□□□□ -1.71
CKS1YBR135W CPR1P14832 162 aaKnown RBP4.39□□□□□ -1.71
CKS1YBR135W RGT1P32862 1170 aa4.39□□□□□ -1.71
CKS1YBR135W MRP4P32902 394 aa4.39□□□□□ -1.71
CKS1YBR135W FMP46P36141 133 aaKnown RBP4.39□□□□□ -1.71
CKS1YBR135W LAS1P36146 502 aaPredicted RBP4.39□□□□□ -1.71
CKS1YBR135W NAT2P37293 288 aa4.39□□□□□ -1.71
CKS1YBR135W YBP1P38315 674 aa4.39□□□□□ -1.71
CKS1YBR135W MKT1P40850 830 aaKnown RBP4.39□□□□□ -1.71
CKS1YBR135W OST1P41543 476 aaKnown RBP4.39□□□□□ -1.71
CKS1YBR135W EPL1P43572 832 aa4.39□□□□□ -1.71
CKS1YBR135W TOF1P53840 1238 aa4.39□□□□□ -1.71
CKS1YBR135W YDR286CQ05530 114 aa4.39□□□□□ -1.71
CKS1YBR135W PGC1Q08959 321 aa4.39□□□□□ -1.71
CKS1YBR135W RPO41P13433 1351 aaKnown RBP4.39□□□□□ -1.71
CKS1YBR135W AUS1Q08409 1394 aa4.39□□□□□ -1.71
CKS1YBR135W SLY1P22213 666 aa4.38□□□□□ -1.71
CKS1YBR135W SPS22P25380 463 aa4.38□□□□□ -1.71
CKS1YBR135W YSC83P32792 385 aa4.38□□□□□ -1.71
CKS1YBR135W RIB5P38145 238 aa4.38□□□□□ -1.71
CKS1YBR135W YBR137WP38276 179 aa4.38□□□□□ -1.71
CKS1YBR135W TIF5P38431 405 aaKnown RBP4.38□□□□□ -1.71
CKS1YBR135W YER079WP40052 210 aaKnown RBP4.38□□□□□ -1.71
CKS1YBR135W ASN2P49090 572 aaKnown RBP4.38□□□□□ -1.71
CKS1YBR135W HNT3Q08702 217 aa4.38□□□□□ -1.71
CKS1YBR135W YDR061WQ12298 539 aa4.38□□□□□ -1.71
CKS1YBR135W RNH203Q12338 110 aa4.38□□□□□ -1.71
CKS1YBR135W YMR230W-AQ3E7B5 62 aa4.38□□□□□ -1.71
CKS1YBR135W YCL021W-AQ96VH3 125 aa4.38□□□□□ -1.71
CKS1YBR135W SRN2Q99176 213 aa4.38□□□□□ -1.71
CKS1YBR135W HEM15P16622 393 aa4.37□□□□□ -1.71
CKS1YBR135W ANP1P32629 500 aa4.37□□□□□ -1.71
CKS1YBR135W YBR056WP38081 501 aa4.37□□□□□ -1.71
CKS1YBR135W PAC11P40960 533 aa4.37□□□□□ -1.71
CKS1YBR135W AZR1P50080 613 aa4.37□□□□□ -1.71
CKS1YBR135W YGL260WP53056 76 aa4.37□□□□□ -1.71
CKS1YBR135W YIP5P53108 310 aa4.37□□□□□ -1.71
CKS1YBR135W HXT11P54862 567 aa4.37□□□□□ -1.71
CKS1YBR135W IPK1Q06667 281 aa4.37□□□□□ -1.71
CKS1YBR135W TFB5Q3E7C1 72 aaPredicted RBP4.37□□□□□ -1.71
CKS1YBR135W PHO84P25297 587 aaKnown RBP4.36□□□□□ -1.71
CKS1YBR135W SIF2P38262 535 aa4.36□□□□□ -1.71
CKS1YBR135W MNL1P38888 796 aa4.36□□□□□ -1.71
CKS1YBR135W SIM1P40472 476 aa4.36□□□□□ -1.71
CKS1YBR135W SFH5P47008 294 aa4.36□□□□□ -1.71
CKS1YBR135W ATP22P50273 684 aaPredicted RBP4.36□□□□□ -1.71
CKS1YBR135W GOR1P53839 350 aa4.36□□□□□ -1.71
CKS1YBR135W PRP3Q03338 469 aaPredicted RBP4.36□□□□□ -1.71
CKS1YBR135W SNX3Q08826 162 aaKnown RBP4.36□□□□□ -1.71
CKS1YBR135W TPT1Q12272 230 aaKnown RBP4.36□□□□□ -1.71
CKS1YBR135W OSM1P21375 501 aaKnown RBP4.35□□□□□ -1.71
CKS1YBR135W SKN1P33336 771 aa4.35□□□□□ -1.71
CKS1YBR135W YKL097CP34245 136 aa4.35□□□□□ -1.71
CKS1YBR135W RRP1P35178 278 aaPredicted RBP4.35□□□□□ -1.71
CKS1YBR135W MMF1P40185 145 aaKnown RBP4.35□□□□□ -1.71
CKS1YBR135W MEP2P41948 499 aa4.35□□□□□ -1.71
CKS1YBR135W BTN2P53286 410 aa4.35□□□□□ -1.71
CKS1YBR135W URC2Q04411 772 aa4.35□□□□□ -1.71
CKS1YBR135W BCH1Q05029 724 aa4.35□□□□□ -1.71
CKS1YBR135W DBP9Q06218 594 aaKnown RBP4.35□□□□□ -1.71
CKS1YBR135W RPL12AP0CX53 165 aaKnown RBP4.34□□□□□ -1.71
CKS1YBR135W RPL12BP0CX54 165 aa4.34□□□□□ -1.71
CKS1YBR135W FAA1P30624 700 aaKnown RBP4.34□□□□□ -1.71
CKS1YBR135W UIP5P36137 443 aa4.34□□□□□ -1.71
CKS1YBR135W ATP3P38077 311 aaKnown RBP4.34□□□□□ -1.71
CKS1YBR135W MTC6P38849 526 aa4.34□□□□□ -1.71
CKS1YBR135W KRE9P39005 276 aa4.34□□□□□ -1.71
CKS1YBR135W PMT5P52867 743 aa4.34□□□□□ -1.71
CKS1YBR135W RTT102P53330 157 aa4.34□□□□□ -1.71
CKS1YBR135W TLG1Q03322 224 aa4.34□□□□□ -1.71
CKS1YBR135W NOP6Q07623 225 aaKnown RBP4.34□□□□□ -1.71
CKS1YBR135W OPI3P05375 206 aa4.33□□□□□ -1.72
CKS1YBR135W KRR1P25586 316 aaPredicted RBP4.33□□□□□ -1.72
CKS1YBR135W KAP104P38217 918 aaKnown RBP4.33□□□□□ -1.72
CKS1YBR135W STE24P47154 453 aa4.33□□□□□ -1.72
CKS1YBR135W ECM7Q06200 448 aa4.33□□□□□ -1.72
CKS1YBR135W AAD15Q08361 143 aa4.33□□□□□ -1.72
CKS1YBR135W ESA1Q08649 445 aa4.33□□□□□ -1.72
CKS1YBR135W YLR108CQ12259 485 aa4.33□□□□□ -1.72
CKS1YBR135W YER078W-AQ3E7A2 54 aa4.33□□□□□ -1.72
CKS1YBR135W UBA1P22515 1024 aaKnown RBP4.32□□□□□ -1.72
CKS1YBR135W SLM5P25345 492 aaKnown RBP4.32□□□□□ -1.72
CKS1YBR135W MUD1P32605 298 aaKnown RBP4.32□□□□□ -1.72
CKS1YBR135W YEL043WP32618 956 aa4.32□□□□□ -1.72
CKS1YBR135W JLP2P40206 208 aa4.32□□□□□ -1.72
CKS1YBR135W YFL067WP43537 175 aa4.32□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 15 ms