RNA–Protein interactions for RNA: ENST00000640657.1

HNRNPU-230, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 4,323 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-230ENST00000640657 A0A0A6YYK5 440 aaPredicted RBP5.42□□□□□ -1.54
HNRNPU-230ENST00000640657 ESYT3A0FGR9 886 aa5.42□□□□□ -1.54
HNRNPU-230ENST00000640657 ARHGAP10A1A4S6 786 aa5.42□□□□□ -1.54
HNRNPU-230ENST00000640657 ENO4A6NNW6 628 aa5.42□□□□□ -1.54
HNRNPU-230ENST00000640657 IPO5O00410 1097 aaKnown RBP5.42□□□□□ -1.54
HNRNPU-230ENST00000640657 DAPK3O43293 454 aa5.42□□□□□ -1.54
HNRNPU-230ENST00000640657 VHLP40337 213 aa5.42□□□□□ -1.54
HNRNPU-230ENST00000640657 MSH2P43246 934 aa5.42□□□□□ -1.54
HNRNPU-230ENST00000640657 CTCFP49711 727 aaPredicted RBP5.42□□□□□ -1.54
HNRNPU-230ENST00000640657 ZBTB17Q13105 803 aa5.42□□□□□ -1.54
HNRNPU-230ENST00000640657 ITGB3BPQ13352 177 aaPredicted RBP5.42□□□□□ -1.54
HNRNPU-230ENST00000640657 CYFIP1Q7L576 1253 aa5.42□□□□□ -1.54
HNRNPU-230ENST00000640657 SESTD1Q86VW0 696 aa5.42□□□□□ -1.54
HNRNPU-230ENST00000640657 GPBP1Q86WP2 473 aa5.42□□□□□ -1.54
HNRNPU-230ENST00000640657 IQCKQ8N0W5 287 aa5.42□□□□□ -1.54
HNRNPU-230ENST00000640657 CFAP61Q8NHU2 1237 aa5.42□□□□□ -1.54
HNRNPU-230ENST00000640657 ANKS1AQ92625 1134 aa5.42□□□□□ -1.54
HNRNPU-230ENST00000640657 SERPINB12Q96P63 405 aa5.42□□□□□ -1.54
HNRNPU-230ENST00000640657 PABPC3Q9H361 631 aaKnown RBP5.42□□□□□ -1.54
HNRNPU-230ENST00000640657 FAM96AQ9H5X1 160 aa5.42□□□□□ -1.54
HNRNPU-230ENST00000640657 ANAPC4Q9UJX5 808 aa5.42□□□□□ -1.54
HNRNPU-230ENST00000640657 PCDHB13Q9Y5F0 798 aa5.42□□□□□ -1.54
HNRNPU-230ENST00000640657 POTEFA5A3E0 1075 aa5.42□□□□□ -1.54
HNRNPU-230ENST00000640657 IGF2BP3O00425 579 aaKnown RBP eCLIP5.42□□□□□ -1.54
HNRNPU-230ENST00000640657 NVLO15381 856 aaKnown RBP5.42□□□□□ -1.54
HNRNPU-230ENST00000640657 RASSF9O75901 435 aa5.42□□□□□ -1.54
HNRNPU-230ENST00000640657 POTEIP0CG38 1075 aa5.42□□□□□ -1.54
HNRNPU-230ENST00000640657 PDHBP11177 359 aa5.42□□□□□ -1.54
HNRNPU-230ENST00000640657 PECAM1P16284 738 aaPredicted RBP5.42□□□□□ -1.54
HNRNPU-230ENST00000640657 HNRNPH3P31942 346 aaKnown RBP5.42□□□□□ -1.54
HNRNPU-230ENST00000640657 SLC1A4P43007 532 aa5.42□□□□□ -1.54
HNRNPU-230ENST00000640657 TFAP4Q01664 338 aa5.42□□□□□ -1.54
HNRNPU-230ENST00000640657 ROR2Q01974 943 aaKnown RBP5.42□□□□□ -1.54
HNRNPU-230ENST00000640657 MEI1Q5TIA1 1274 aa5.42□□□□□ -1.54
HNRNPU-230ENST00000640657 POTEEQ6S8J3 1075 aa5.42□□□□□ -1.54
HNRNPU-230ENST00000640657 FRMD5Q7Z6J6 570 aa5.42□□□□□ -1.54
HNRNPU-230ENST00000640657 NELFCDQ8IXH7 590 aa5.42□□□□□ -1.54
HNRNPU-230ENST00000640657 CMTR1Q8N1G2 835 aaKnown RBP5.42□□□□□ -1.54
HNRNPU-230ENST00000640657 MAB21L3Q8N8X9 362 aa5.42□□□□□ -1.54
HNRNPU-230ENST00000640657 PNMA1Q8ND90 353 aa5.42□□□□□ -1.54
HNRNPU-230ENST00000640657 ERP44Q9BS26 406 aa5.42□□□□□ -1.54
HNRNPU-230ENST00000640657 CCDC28BQ9BUN5 200 aa5.42□□□□□ -1.54
HNRNPU-230ENST00000640657 DNAI2Q9GZS0 605 aa5.42□□□□□ -1.54
HNRNPU-230ENST00000640657 WNT8AQ9H1J5 351 aa5.42□□□□□ -1.54
HNRNPU-230ENST00000640657 PIH1D3Q9NQM4 214 aaKnown RBP5.42□□□□□ -1.54
HNRNPU-230ENST00000640657 EXOC7Q9UPT5 735 aa5.42□□□□□ -1.54
HNRNPU-230ENST00000640657 RABGAP1Q9Y3P9 1069 aa5.42□□□□□ -1.54
HNRNPU-230ENST00000640657 ESRRAP11474 423 aaPredicted RBP5.42□□□□□ -1.54
HNRNPU-230ENST00000640657 PSMC2P35998 433 aaKnown RBP5.42□□□□□ -1.54
HNRNPU-230ENST00000640657 SKIV2L2P42285 1042 aaKnown RBP5.42□□□□□ -1.54
HNRNPU-230ENST00000640657 TMEM154Q6P9G4 183 aa5.42□□□□□ -1.54
HNRNPU-230ENST00000640657 FOXR2Q6PJQ5 311 aa5.42□□□□□ -1.54
HNRNPU-230ENST00000640657 CENPUQ71F23 418 aa5.42□□□□□ -1.54
HNRNPU-230ENST00000640657 CCDC89Q8N998 374 aa5.42□□□□□ -1.54
HNRNPU-230ENST00000640657 RFFLQ8WZ73 363 aa5.42□□□□□ -1.54
HNRNPU-230ENST00000640657 TSNARE1Q96NA8 513 aa5.42□□□□□ -1.54
HNRNPU-230ENST00000640657 TRAPPC9Q96Q05 1148 aa5.42□□□□□ -1.54
HNRNPU-230ENST00000640657 TGS1Q96RS0 853 aaKnown RBP5.42□□□□□ -1.54
HNRNPU-230ENST00000640657 TRIM9Q9C026 710 aa5.42□□□□□ -1.54
HNRNPU-230ENST00000640657 RXFP1Q9HBX9 757 aa5.42□□□□□ -1.54
HNRNPU-230ENST00000640657 RGL1Q9NZL6 768 aa5.42□□□□□ -1.54
HNRNPU-230ENST00000640657 LEMD3Q9Y2U8 911 aa5.42□□□□□ -1.54
HNRNPU-230ENST00000640657 MAP2P11137 1827 aaKnown RBP5.41□□□□□ -1.54
HNRNPU-230ENST00000640657 BTNL10A8MVZ5 291 aa5.41□□□□□ -1.54
HNRNPU-230ENST00000640657 GYG2O15488 501 aa5.41□□□□□ -1.54
HNRNPU-230ENST00000640657 ZPR1O75312 459 aa5.41□□□□□ -1.54
HNRNPU-230ENST00000640657 HLA-DOAP06340 250 aa5.41□□□□□ -1.54
HNRNPU-230ENST00000640657 EEF2P13639 858 aaKnown RBP5.41□□□□□ -1.54
HNRNPU-230ENST00000640657 BRAFP15056 766 aa5.41□□□□□ -1.54
HNRNPU-230ENST00000640657 MARK3P27448 753 aa5.41□□□□□ -1.54
HNRNPU-230ENST00000640657 TMOD1P28289 359 aa5.41□□□□□ -1.54
HNRNPU-230ENST00000640657 RANBP1P43487 201 aa5.41□□□□□ -1.54
HNRNPU-230ENST00000640657 PSEN1P49768 467 aa5.41□□□□□ -1.54
HNRNPU-230ENST00000640657 TOB1P50616 345 aaPredicted RBP5.41□□□□□ -1.54
HNRNPU-230ENST00000640657 AP2B1P63010 937 aa5.41□□□□□ -1.54
HNRNPU-230ENST00000640657 CDR2Q01850 454 aa5.41□□□□□ -1.54
HNRNPU-230ENST00000640657 PDIA5Q14554 519 aa5.41□□□□□ -1.54
HNRNPU-230ENST00000640657 NTRK3Q16288 839 aa5.41□□□□□ -1.54
HNRNPU-230ENST00000640657 NAALADL2Q58DX5 795 aa5.41□□□□□ -1.54
HNRNPU-230ENST00000640657 IRGCQ6NXR0 463 aa5.41□□□□□ -1.54
HNRNPU-230ENST00000640657 TTI2Q6NXR4 508 aa5.41□□□□□ -1.54
HNRNPU-230ENST00000640657 EPM2AIP1Q7L775 607 aaPredicted RBP5.41□□□□□ -1.54
HNRNPU-230ENST00000640657 KRT26Q7Z3Y9 468 aa5.41□□□□□ -1.54
HNRNPU-230ENST00000640657 SCYL3Q8IZE3 742 aa5.41□□□□□ -1.54
HNRNPU-230ENST00000640657 OGFOD1Q8N543 542 aa5.41□□□□□ -1.54
HNRNPU-230ENST00000640657 SYT2Q8N9I0 419 aaPredicted RBP5.41□□□□□ -1.54
HNRNPU-230ENST00000640657 SMCR8Q8TEV9 937 aaPredicted RBP5.41□□□□□ -1.54
HNRNPU-230ENST00000640657 PRMT1Q99873 361 aaKnown RBP5.41□□□□□ -1.54
HNRNPU-230ENST00000640657 FAM167BQ9BTA0 163 aa5.41□□□□□ -1.54
HNRNPU-230ENST00000640657 TRIM55Q9BYV6 548 aa5.41□□□□□ -1.54
HNRNPU-230ENST00000640657 LACRTQ9GZZ8 138 aa5.41□□□□□ -1.54
HNRNPU-230ENST00000640657 DDX47Q9H0S4 455 aaKnown RBP5.41□□□□□ -1.54
HNRNPU-230ENST00000640657 DCLRE1BQ9H816 532 aa5.41□□□□□ -1.54
HNRNPU-230ENST00000640657 VPS37BQ9H9H4 285 aa5.41□□□□□ -1.54
HNRNPU-230ENST00000640657 ZFP69BQ9UJL9 534 aa5.41□□□□□ -1.54
HNRNPU-230ENST00000640657 PCDHA12Q9UN75 941 aa5.41□□□□□ -1.54
HNRNPU-230ENST00000640657 FAF1Q9UNN5 650 aaPredicted RBP5.41□□□□□ -1.54
HNRNPU-230ENST00000640657 SNX24Q9Y343 169 aa5.41□□□□□ -1.54
HNRNPU-230ENST00000640657 HEG1Q9ULI3 1381 aa5.41□□□□□ -1.54
HNRNPU-230ENST00000640657 hCG_1642624A0A1W2PR95 340 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms