RNA–Protein interactions for RNA: ENST00000640499.1

VEGFA-231, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFA, Length 1,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-231ENST00000640499 HBP1O60381 514 aa30.08■■■□□ 2.41
VEGFA-231ENST00000640499 NEMFO60524 1076 aa30.08■■■□□ 2.41
VEGFA-231ENST00000640499 SELPP16109 830 aa30.08■■■□□ 2.41
VEGFA-231ENST00000640499 CALCRLQ16602 461 aa30.08■■■□□ 2.41
VEGFA-231ENST00000640499 ZNF365Q70YC5 407 aa30.08■■■□□ 2.41
VEGFA-231ENST00000640499 LRRC8DQ7L1W4 858 aa30.08■■■□□ 2.41
VEGFA-231ENST00000640499 C4orf32Q8N8J7 132 aa30.08■■■□□ 2.41
VEGFA-231ENST00000640499 OSBPL7Q9BZF2 842 aa30.08■■■□□ 2.41
VEGFA-231ENST00000640499 RRN3P2A6NIE6 340 aa30.07■■■□□ 2.4
VEGFA-231ENST00000640499 THPOP40225 353 aa30.07■■■□□ 2.4
VEGFA-231ENST00000640499 TTC38Q5R3I4 469 aa30.07■■■□□ 2.4
VEGFA-231ENST00000640499 SLFN12Q8IYM2 578 aa30.07■■■□□ 2.4
VEGFA-231ENST00000640499 CCDC155Q8N6L0 562 aa30.07■■■□□ 2.4
VEGFA-231ENST00000640499 FOXD4L1Q9NU39 408 aa30.07■■■□□ 2.4
VEGFA-231ENST00000640499 TUBE1Q9UJT0 475 aa30.07■■■□□ 2.4
VEGFA-231ENST00000640499 LAMA2P24043 3122 aaKnown RBP30.07■■■□□ 2.4
VEGFA-231ENST00000640499 SOX1O00570 391 aaPredicted RBP30.06■■■□□ 2.4
VEGFA-231ENST00000640499 NBNO60934 754 aa30.06■■■□□ 2.4
VEGFA-231ENST00000640499 TRAPPC10P48553 1259 aa30.06■■■□□ 2.4
VEGFA-231ENST00000640499 GNL2Q13823 731 aaKnown RBP30.06■■■□□ 2.4
VEGFA-231ENST00000640499 MCTP1Q6DN14 999 aa30.06■■■□□ 2.4
VEGFA-231ENST00000640499 TRMT1LQ7Z2T5 733 aaKnown RBP30.06■■■□□ 2.4
VEGFA-231ENST00000640499 BBXQ8WY36 941 aaPredicted RBP30.06■■■□□ 2.4
VEGFA-231ENST00000640499 H3BQV1 296 aa30.05■■■□□ 2.4
VEGFA-231ENST00000640499 BAG4O95429 457 aaKnown RBP30.05■■■□□ 2.4
VEGFA-231ENST00000640499 TCTN1Q2MV58 587 aa30.05■■■□□ 2.4
VEGFA-231ENST00000640499 RASIP1Q5U651 963 aa30.05■■■□□ 2.4
VEGFA-231ENST00000640499 MTHFD1LQ6UB35 978 aa30.05■■■□□ 2.4
VEGFA-231ENST00000640499 DEFB128Q7Z7B8 93 aa30.05■■■□□ 2.4
VEGFA-231ENST00000640499 RPAINQ86UA6 219 aa30.05■■■□□ 2.4
VEGFA-231ENST00000640499 WRAP73Q9P2S5 460 aaPredicted RBP30.05■■■□□ 2.4
VEGFA-231ENST00000640499 PCDHB6Q9Y5E3 794 aa30.05■■■□□ 2.4
VEGFA-231ENST00000640499 TXKP42681 527 aa30.04■■■□□ 2.4
VEGFA-231ENST00000640499 PRKCEQ02156 737 aa30.04■■■□□ 2.4
VEGFA-231ENST00000640499 ZNF484Q5JVG2 852 aa30.04■■■□□ 2.4
VEGFA-231ENST00000640499 CKAP2LQ8IYA6 745 aa30.04■■■□□ 2.4
VEGFA-231ENST00000640499 BANK1Q8NDB2 785 aa30.04■■■□□ 2.4
VEGFA-231ENST00000640499 TTC12Q9H892 705 aaPredicted RBP30.04■■■□□ 2.4
VEGFA-231ENST00000640499 PCDHA12Q9UN75 941 aa30.04■■■□□ 2.4
VEGFA-231ENST00000640499 PCDHA2Q9Y5H9 948 aa30.04■■■□□ 2.4
VEGFA-231ENST00000640499 MARCH6O60337 910 aa30.03■■■□□ 2.4
VEGFA-231ENST00000640499 OATP04181 439 aa30.03■■■□□ 2.4
VEGFA-231ENST00000640499 KLRC1P26715 233 aa30.03■■■□□ 2.4
VEGFA-231ENST00000640499 RFC2P35250 354 aa30.03■■■□□ 2.4
VEGFA-231ENST00000640499 FXR1P51114 621 aaKnown RBP eCLIP30.03■■■□□ 2.4
VEGFA-231ENST00000640499 EPHA7Q15375 998 aa30.03■■■□□ 2.4
VEGFA-231ENST00000640499 LRIT3Q3SXY7 679 aa30.03■■■□□ 2.4
VEGFA-231ENST00000640499 FAM26DQ5JW98 314 aa30.03■■■□□ 2.4
VEGFA-231ENST00000640499 DNAJB3Q8WWF6 145 aa30.03■■■□□ 2.4
VEGFA-231ENST00000640499 CEP89Q96ST8 783 aa30.03■■■□□ 2.4
VEGFA-231ENST00000640499 COL1A2P08123 1366 aa30.03■■■□□ 2.4
VEGFA-231ENST00000640499 TMEM150BA6NC51 233 aa30.02■■■□□ 2.4
VEGFA-231ENST00000640499 CHRNA1P02708 482 aa30.02■■■□□ 2.4
VEGFA-231ENST00000640499 CXCL10P02778 98 aa30.02■■■□□ 2.4
VEGFA-231ENST00000640499 ORC2Q13416 577 aaPredicted RBP30.02■■■□□ 2.4
VEGFA-231ENST00000640499 NCAPH2Q6IBW4 605 aa30.02■■■□□ 2.4
VEGFA-231ENST00000640499 TAF2Q6P1X5 1199 aa30.02■■■□□ 2.4
VEGFA-231ENST00000640499 RPUSD2Q8IZ73 545 aaKnown RBP30.02■■■□□ 2.4
VEGFA-231ENST00000640499 TNPO1Q92973 898 aaKnown RBP30.02■■■□□ 2.4
VEGFA-231ENST00000640499 RGL1Q9NZL6 768 aa30.02■■■□□ 2.4
VEGFA-231ENST00000640499 CXXC1Q9P0U4 656 aaPredicted RBP30.02■■■□□ 2.4
VEGFA-231ENST00000640499 NOL7Q9UMY1 257 aaKnown RBP30.02■■■□□ 2.4
VEGFA-231ENST00000640499 SIP14410 1827 aa30.01■■■□□ 2.4
VEGFA-231ENST00000640499 RSPH10B2B2RC85 870 aa30.01■■■□□ 2.39
VEGFA-231ENST00000640499 CAND2O75155 1236 aa30.01■■■□□ 2.39
VEGFA-231ENST00000640499 C22orf31O95567 290 aa30.01■■■□□ 2.39
VEGFA-231ENST00000640499 FGBP02675 491 aa30.01■■■□□ 2.39
VEGFA-231ENST00000640499 RSPH10BP0C881 870 aa30.01■■■□□ 2.39
VEGFA-231ENST00000640499 SYT1P21579 422 aa30.01■■■□□ 2.39
VEGFA-231ENST00000640499 MGAT3Q09327 533 aa30.01■■■□□ 2.39
VEGFA-231ENST00000640499 TARBP2Q15633 366 aaKnown RBP30.01■■■□□ 2.39
VEGFA-231ENST00000640499 HERVK_113Q902F9 699 aa30.01■■■□□ 2.39
VEGFA-231ENST00000640499 CTSHP09668 335 aa30■■■□□ 2.39
VEGFA-231ENST00000640499 PSMC5P62195 406 aa30■■■□□ 2.39
VEGFA-231ENST00000640499 PSRC1Q6PGN9 363 aaPredicted RBP30■■■□□ 2.39
VEGFA-231ENST00000640499 OTOP2Q7RTS6 562 aa30■■■□□ 2.39
VEGFA-231ENST00000640499 FAM167AQ96KS9 214 aa30■■■□□ 2.39
VEGFA-231ENST00000640499 NIFKQ9BYG3 293 aaKnown RBP30■■■□□ 2.39
VEGFA-231ENST00000640499 EIF4ENIF1Q9NRA8 985 aaKnown RBP30■■■□□ 2.39
VEGFA-231ENST00000640499 EVPLQ92817 2033 aa30■■■□□ 2.39
VEGFA-231ENST00000640499 OR52Z1P0C646 297 aa29.99■■■□□ 2.39
VEGFA-231ENST00000640499 QARSP47897 775 aaKnown RBP29.99■■■□□ 2.39
VEGFA-231ENST00000640499 ANO5Q75V66 913 aa29.99■■■□□ 2.39
VEGFA-231ENST00000640499 HSCBQ8IWL3 235 aa29.99■■■□□ 2.39
VEGFA-231ENST00000640499 DYDC2Q96IM9 177 aa29.99■■■□□ 2.39
VEGFA-231ENST00000640499 RNPC3Q96LT9 517 aaKnown RBP29.99■■■□□ 2.39
VEGFA-231ENST00000640499 HSD17B14Q9BPX1 270 aa29.99■■■□□ 2.39
VEGFA-231ENST00000640499 FAM49AQ9H0Q0 323 aaPredicted RBP29.99■■■□□ 2.39
VEGFA-231ENST00000640499 NRBP2Q9NSY0 501 aa29.99■■■□□ 2.39
VEGFA-231ENST00000640499 SMIM35A0A1B0GVV1 85 aa29.98■■■□□ 2.39
VEGFA-231ENST00000640499 POTEMA6NI47 508 aa29.98■■■□□ 2.39
VEGFA-231ENST00000640499 SLITRK3O94933 977 aa29.98■■■□□ 2.39
VEGFA-231ENST00000640499 P4HBP07237 508 aaKnown RBP29.98■■■□□ 2.39
VEGFA-231ENST00000640499 PFKMP08237 780 aa29.98■■■□□ 2.39
VEGFA-231ENST00000640499 PTGDRQ13258 359 aa29.98■■■□□ 2.39
VEGFA-231ENST00000640499 XKR3Q5GH77 459 aa29.98■■■□□ 2.39
VEGFA-231ENST00000640499 KIAA0319LQ8IZA0 1049 aa29.98■■■□□ 2.39
VEGFA-231ENST00000640499 LINC01465Q8N7H1 131 aa29.98■■■□□ 2.39
VEGFA-231ENST00000640499 LRCH3Q96II8 777 aa29.98■■■□□ 2.39
VEGFA-231ENST00000640499 EIF2AK1Q9BQI3 630 aaKnown RBP29.98■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms