RNA–Protein interactions for RNA: ENST00000640483.1

CACNA1D-230, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

APPRIS ALT2 TSL 5

Gene CACNA1D, Length 5,673 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-230ENST00000640483 ZNF667Q5HYK9 610 aa10.12□□□□□ -0.79
CACNA1D-230ENST00000640483 SWSAP1Q6NVH7 229 aa10.12□□□□□ -0.79
CACNA1D-230ENST00000640483 COL23A1Q86Y22 540 aaPredicted RBP10.12□□□□□ -0.79
CACNA1D-230ENST00000640483 EMILIN3Q9NT22 766 aa10.12□□□□□ -0.79
CACNA1D-230ENST00000640483 FOXO4P98177 505 aa10.11□□□□□ -0.79
CACNA1D-230ENST00000640483 LRRC41Q15345 812 aa10.11□□□□□ -0.79
CACNA1D-230ENST00000640483 KYAT1Q16773 422 aa10.11□□□□□ -0.79
CACNA1D-230ENST00000640483 P2RX5Q93086 422 aa10.11□□□□□ -0.79
CACNA1D-230ENST00000640483 MTMR6Q9Y217 621 aa10.11□□□□□ -0.79
CACNA1D-230ENST00000640483 MYO1FO00160 1098 aa10.11□□□□□ -0.79
CACNA1D-230ENST00000640483 BRD1O95696 1058 aa10.11□□□□□ -0.79
CACNA1D-230ENST00000640483 GH1P01241 217 aa10.11□□□□□ -0.79
CACNA1D-230ENST00000640483 H2AFZP0C0S5 128 aa10.11□□□□□ -0.79
CACNA1D-230ENST00000640483 MXI1P50539 228 aa10.11□□□□□ -0.79
CACNA1D-230ENST00000640483 SCARA5Q6ZMJ2 495 aa10.11□□□□□ -0.79
CACNA1D-230ENST00000640483 H2AFVQ71UI9 128 aa10.11□□□□□ -0.79
CACNA1D-230ENST00000640483 LDHDQ86WU2 507 aa10.11□□□□□ -0.79
CACNA1D-230ENST00000640483 ADGRF4Q8IZF3 695 aa10.11□□□□□ -0.79
CACNA1D-230ENST00000640483 VEGFAP15692 232 aaPredicted RBP10.11□□□□□ -0.79
CACNA1D-230ENST00000640483 CD58P19256 250 aa10.11□□□□□ -0.79
CACNA1D-230ENST00000640483 ARHGAP4P98171 946 aa10.11□□□□□ -0.79
CACNA1D-230ENST00000640483 PPP2R5EQ16537 467 aa10.11□□□□□ -0.79
CACNA1D-230ENST00000640483 ARL6IP4Q66PJ3 421 aaKnown RBP10.11□□□□□ -0.79
CACNA1D-230ENST00000640483 RBSNQ9H1K0 784 aa10.11□□□□□ -0.79
CACNA1D-230ENST00000640483 POLR3EQ9NVU0 708 aa10.11□□□□□ -0.79
CACNA1D-230ENST00000640483 DONSONQ9NYP3 566 aa10.11□□□□□ -0.79
CACNA1D-230ENST00000640483 GABBR1Q9UBS5 961 aa10.11□□□□□ -0.79
CACNA1D-230ENST00000640483 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.11□□□□□ -0.79
CACNA1D-230ENST00000640483 V9GYY5 206 aaPredicted RBP10.11□□□□□ -0.79
CACNA1D-230ENST00000640483 A0A1W2PQ27 194 aa10.11□□□□□ -0.79
CACNA1D-230ENST00000640483 A0A1W2PQ64 194 aa10.11□□□□□ -0.79
CACNA1D-230ENST00000640483 A0A1W2PQD8 194 aa10.11□□□□□ -0.79
CACNA1D-230ENST00000640483 PI4K2BG5E9Z4 385 aa10.11□□□□□ -0.79
CACNA1D-230ENST00000640483 I3L4J1 428 aa10.11□□□□□ -0.79
CACNA1D-230ENST00000640483 EPHB1P54762 984 aa10.11□□□□□ -0.79
CACNA1D-230ENST00000640483 KIF23Q02241 960 aaPredicted RBP10.11□□□□□ -0.79
CACNA1D-230ENST00000640483 ACBD5Q5T8D3 534 aaPredicted RBP10.11□□□□□ -0.79
CACNA1D-230ENST00000640483 CTAGE3PQ8IX95 158 aa10.11□□□□□ -0.79
CACNA1D-230ENST00000640483 SMAP1Q8IYB5 467 aaPredicted RBP10.11□□□□□ -0.79
CACNA1D-230ENST00000640483 TRMT2AQ8IZ69 625 aaKnown RBP10.11□□□□□ -0.79
CACNA1D-230ENST00000640483 TRIM56Q9BRZ2 755 aaKnown RBP10.11□□□□□ -0.79
CACNA1D-230ENST00000640483 BHMT2Q9H2M3 363 aa10.11□□□□□ -0.79
CACNA1D-230ENST00000640483 RRAGDQ9NQL2 400 aaPredicted RBP10.11□□□□□ -0.79
CACNA1D-230ENST00000640483 NEDD4P46934 1319 aa10.11□□□□□ -0.79
CACNA1D-230ENST00000640483 CTNND1O60716 968 aaKnown RBP10.11□□□□□ -0.79
CACNA1D-230ENST00000640483 GADD45BO75293 160 aaPredicted RBP10.11□□□□□ -0.79
CACNA1D-230ENST00000640483 P4HBP07237 508 aaKnown RBP10.11□□□□□ -0.79
CACNA1D-230ENST00000640483 KRT17Q04695 432 aa10.11□□□□□ -0.79
CACNA1D-230ENST00000640483 PFKFB3Q16875 520 aaPredicted RBP10.11□□□□□ -0.79
CACNA1D-230ENST00000640483 NBPF20Q3BBV1 942 aa10.11□□□□□ -0.79
CACNA1D-230ENST00000640483 CPLX4Q7Z7G2 160 aa10.11□□□□□ -0.79
CACNA1D-230ENST00000640483 RNF180Q86T96 592 aa10.11□□□□□ -0.79
CACNA1D-230ENST00000640483 SCN4BQ8IWT1 228 aa10.11□□□□□ -0.79
CACNA1D-230ENST00000640483 DEFB129Q9H1M3 183 aa10.11□□□□□ -0.79
CACNA1D-230ENST00000640483 SLC9A2Q9UBY0 812 aa10.11□□□□□ -0.79
CACNA1D-230ENST00000640483 PFASO15067 1338 aa10.1□□□□□ -0.79
CACNA1D-230ENST00000640483 GOLGA8SH3BPF8 625 aa10.1□□□□□ -0.79
CACNA1D-230ENST00000640483 GPC3P51654 580 aa10.1□□□□□ -0.79
CACNA1D-230ENST00000640483 SATB1Q01826 763 aa10.1□□□□□ -0.79
CACNA1D-230ENST00000640483 NKX1-1Q15270 411 aaPredicted RBP10.1□□□□□ -0.79
CACNA1D-230ENST00000640483 ZNF827Q17R98 1081 aa10.1□□□□□ -0.79
CACNA1D-230ENST00000640483 QRICH1Q2TAL8 776 aa10.1□□□□□ -0.79
CACNA1D-230ENST00000640483 DNAJC24Q6P3W2 148 aa10.1□□□□□ -0.79
CACNA1D-230ENST00000640483 SAMD7Q7Z3H4 446 aa10.1□□□□□ -0.79
CACNA1D-230ENST00000640483 ADAT2Q7Z6V5 191 aaKnown RBP10.1□□□□□ -0.79
CACNA1D-230ENST00000640483 TRIM58Q8NG06 486 aa10.1□□□□□ -0.79
CACNA1D-230ENST00000640483 GDAQ9Y2T3 454 aa10.1□□□□□ -0.79
CACNA1D-230ENST00000640483 AKR1B1P15121 316 aa10.1□□□□□ -0.79
CACNA1D-230ENST00000640483 NDUFA8P51970 172 aa10.1□□□□□ -0.79
CACNA1D-230ENST00000640483 PSMC5P62195 406 aa10.1□□□□□ -0.79
CACNA1D-230ENST00000640483 FKBP3Q00688 224 aaKnown RBP10.1□□□□□ -0.79
CACNA1D-230ENST00000640483 NR5A1Q13285 461 aa10.1□□□□□ -0.79
CACNA1D-230ENST00000640483 ZNF658Q5TYW1 1059 aaPredicted RBP10.1□□□□□ -0.79
CACNA1D-230ENST00000640483 HHATQ5VTY9 493 aa10.1□□□□□ -0.79
CACNA1D-230ENST00000640483 TTBK2Q6IQ55 1244 aa10.1□□□□□ -0.79
CACNA1D-230ENST00000640483 USP17L6PQ6QN14 398 aa10.1□□□□□ -0.79
CACNA1D-230ENST00000640483 NEDD1Q8NHV4 660 aa10.1□□□□□ -0.79
CACNA1D-230ENST00000640483 PGBD4Q96DM1 585 aa10.1□□□□□ -0.79
CACNA1D-230ENST00000640483 GINM1Q9NU53 330 aa10.1□□□□□ -0.79
CACNA1D-230ENST00000640483 DYNC1LI2O43237 492 aaPredicted RBP10.1□□□□□ -0.79
CACNA1D-230ENST00000640483 NTSR2O95665 410 aa10.1□□□□□ -0.79
CACNA1D-230ENST00000640483 PLCG1P19174 1290 aa10.1□□□□□ -0.79
CACNA1D-230ENST00000640483 ADCY8P40145 1251 aa10.1□□□□□ -0.79
CACNA1D-230ENST00000640483 RGS2P41220 211 aa10.1□□□□□ -0.79
CACNA1D-230ENST00000640483 QARSP47897 775 aaKnown RBP10.1□□□□□ -0.79
CACNA1D-230ENST00000640483 RCAN1P53805 252 aa10.1□□□□□ -0.79
CACNA1D-230ENST00000640483 CDC42EP5Q6NZY7 148 aa10.1□□□□□ -0.79
CACNA1D-230ENST00000640483 PADI6Q6TGC4 694 aa10.1□□□□□ -0.79
CACNA1D-230ENST00000640483 PPP4R3CPQ6ZMV5 832 aa10.1□□□□□ -0.79
CACNA1D-230ENST00000640483 ACRBPQ8NEB7 543 aa10.1□□□□□ -0.79
CACNA1D-230ENST00000640483 MTA3Q9BTC8 594 aa10.1□□□□□ -0.79
CACNA1D-230ENST00000640483 UBN1Q9NPG3 1134 aa10.1□□□□□ -0.79
CACNA1D-230ENST00000640483 LRRC7Q96NW7 1537 aa10.1□□□□□ -0.79
CACNA1D-230ENST00000640483 GARSP41250 739 aaKnown RBP10.1□□□□□ -0.79
CACNA1D-230ENST00000640483 BTBD8Q5XKL5 378 aa10.1□□□□□ -0.79
CACNA1D-230ENST00000640483 KAZNQ674X7 775 aa10.1□□□□□ -0.79
CACNA1D-230ENST00000640483 RASEFQ8IZ41 740 aa10.1□□□□□ -0.79
CACNA1D-230ENST00000640483 MRPL47Q9HD33 250 aaKnown RBP10.1□□□□□ -0.79
CACNA1D-230ENST00000640483 RFX7Q2KHR2 1363 aa10.1□□□□□ -0.79
CACNA1D-230ENST00000640483 PNPLA6Q8IY17 1366 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms