RNA–Protein interactions for RNA: ENST00000640463.1

SPIN3-239, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 3,133 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-239ENST00000640463 UBR3Q6ZT12 1888 aa15.29■□□□□ 0.04
SPIN3-239ENST00000640463 CYP3A7-CYP3A51PA0A087WV96 503 aa15.28■□□□□ 0.04
SPIN3-239ENST00000640463 AFPP02771 609 aaKnown RBP15.28■□□□□ 0.04
SPIN3-239ENST00000640463 CYP3A7P24462 503 aa15.28■□□□□ 0.04
SPIN3-239ENST00000640463 GLE1Q53GS7 698 aaKnown RBP15.28■□□□□ 0.04
SPIN3-239ENST00000640463 ARHGAP27Q6ZUM4 889 aa15.28■□□□□ 0.04
SPIN3-239ENST00000640463 RUBCNQ92622 972 aa15.28■□□□□ 0.04
SPIN3-239ENST00000640463 LENG9Q96B70 501 aa15.28■□□□□ 0.04
SPIN3-239ENST00000640463 NAP1L4Q99733 375 aaKnown RBP15.28■□□□□ 0.04
SPIN3-239ENST00000640463 GCNT3O95395 438 aa15.28■□□□□ 0.04
SPIN3-239ENST00000640463 XRCC5P13010 732 aaKnown RBP15.28■□□□□ 0.04
SPIN3-239ENST00000640463 HOXA7P31268 230 aaPredicted RBP15.28■□□□□ 0.04
SPIN3-239ENST00000640463 PDCLQ13371 301 aa15.28■□□□□ 0.04
SPIN3-239ENST00000640463 CFAP58Q5T655 872 aa15.28■□□□□ 0.04
SPIN3-239ENST00000640463 ALS2CLQ60I27 953 aa15.28■□□□□ 0.04
SPIN3-239ENST00000640463 ZC3H3Q8IXZ2 948 aaKnown RBP15.28■□□□□ 0.04
SPIN3-239ENST00000640463 BCAS4Q8TDM0 211 aa15.28■□□□□ 0.04
SPIN3-239ENST00000640463 TAF4BQ92750 862 aa15.28■□□□□ 0.04
SPIN3-239ENST00000640463 AP1M1Q9BXS5 423 aa15.28■□□□□ 0.04
SPIN3-239ENST00000640463 PITPNM2Q9BZ72 1349 aa15.28■□□□□ 0.04
SPIN3-239ENST00000640463 ZNF233A6NK53 670 aa15.28■□□□□ 0.04
SPIN3-239ENST00000640463 SPDYE3A6NKU9 549 aa15.28■□□□□ 0.04
SPIN3-239ENST00000640463 RPS6KA1Q15418 735 aa15.28■□□□□ 0.04
SPIN3-239ENST00000640463 SH3BP5LQ7L8J4 393 aa15.28■□□□□ 0.04
SPIN3-239ENST00000640463 KSR1Q8IVT5 923 aa15.28■□□□□ 0.04
SPIN3-239ENST00000640463 SYT2Q8N9I0 419 aaPredicted RBP15.28■□□□□ 0.04
SPIN3-239ENST00000640463 USP38Q8NB14 1042 aa15.28■□□□□ 0.04
SPIN3-239ENST00000640463 PIGOQ8TEQ8 1089 aa15.28■□□□□ 0.04
SPIN3-239ENST00000640463 RNF14Q9UBS8 474 aa15.28■□□□□ 0.04
SPIN3-239ENST00000640463 SUGT1Q9Y2Z0 365 aa15.28■□□□□ 0.04
SPIN3-239ENST00000640463 GRIN2DO15399 1336 aa15.27■□□□□ 0.04
SPIN3-239ENST00000640463 MYO3BQ8WXR4 1341 aa15.27■□□□□ 0.04
SPIN3-239ENST00000640463 F5H6K3 240 aa15.27■□□□□ 0.04
SPIN3-239ENST00000640463 EML1O00423 815 aa15.27■□□□□ 0.04
SPIN3-239ENST00000640463 MSH4O15457 936 aa15.27■□□□□ 0.04
SPIN3-239ENST00000640463 CEP104O60308 925 aa15.27■□□□□ 0.04
SPIN3-239ENST00000640463 TNFRSF8P28908 595 aa15.27■□□□□ 0.04
SPIN3-239ENST00000640463 ICA1Q05084 483 aa15.27■□□□□ 0.04
SPIN3-239ENST00000640463 KLRC3Q07444 240 aa15.27■□□□□ 0.04
SPIN3-239ENST00000640463 NNTQ13423 1086 aa15.27■□□□□ 0.04
SPIN3-239ENST00000640463 ALKBH5Q6P6C2 394 aaKnown RBP15.27■□□□□ 0.04
SPIN3-239ENST00000640463 PPP4R3CPQ6ZMV5 832 aa15.27■□□□□ 0.04
SPIN3-239ENST00000640463 DDX42Q86XP3 938 aaKnown RBP eCLIP15.27■□□□□ 0.04
SPIN3-239ENST00000640463 SPICE1Q8N0Z3 855 aa15.27■□□□□ 0.04
SPIN3-239ENST00000640463 CRYGNQ8WXF5 182 aa15.27■□□□□ 0.04
SPIN3-239ENST00000640463 MBOAT7Q96N66 472 aa15.27■□□□□ 0.04
SPIN3-239ENST00000640463 NAGPAQ9UK23 515 aa15.27■□□□□ 0.04
SPIN3-239ENST00000640463 TRAF3IP3Q9Y228 551 aa15.27■□□□□ 0.04
SPIN3-239ENST00000640463 SAMM50Q9Y512 469 aa15.27■□□□□ 0.04
SPIN3-239ENST00000640463 LTBP1Q14766 1721 aa15.27■□□□□ 0.03
SPIN3-239ENST00000640463 ZBTB39O15060 712 aa15.27■□□□□ 0.03
SPIN3-239ENST00000640463 NR3C1P04150 777 aa15.27■□□□□ 0.03
SPIN3-239ENST00000640463 RPA1P27694 616 aa15.27■□□□□ 0.03
SPIN3-239ENST00000640463 PAK2Q13177 524 aa15.27■□□□□ 0.03
SPIN3-239ENST00000640463 HHIPL2Q6UWX4 724 aa15.27■□□□□ 0.03
SPIN3-239ENST00000640463 FRMD5Q7Z6J6 570 aa15.27■□□□□ 0.03
SPIN3-239ENST00000640463 ERMNQ8TAM6 284 aa15.27■□□□□ 0.03
SPIN3-239ENST00000640463 GJD4Q96KN9 370 aaPredicted RBP15.27■□□□□ 0.03
SPIN3-239ENST00000640463 CCDC17Q96LX7 622 aa15.27■□□□□ 0.03
SPIN3-239ENST00000640463 AMNQ9BXJ7 453 aa15.27■□□□□ 0.03
SPIN3-239ENST00000640463 CTTNQ14247 550 aaKnown RBP15.26■□□□□ 0.03
SPIN3-239ENST00000640463 EPM2AIP1Q7L775 607 aaPredicted RBP15.26■□□□□ 0.03
SPIN3-239ENST00000640463 FBXO11Q86XK2 927 aa15.26■□□□□ 0.03
SPIN3-239ENST00000640463 DCAF4Q8WV16 495 aa15.26■□□□□ 0.03
SPIN3-239ENST00000640463 PIK3R5Q8WYR1 880 aa15.26■□□□□ 0.03
SPIN3-239ENST00000640463 ZNF219Q9P2Y4 722 aaPredicted RBP15.26■□□□□ 0.03
SPIN3-239ENST00000640463 FAM198AQ9UFP1 575 aa15.26■□□□□ 0.03
SPIN3-239ENST00000640463 GREB1LQ9C091 1923 aaPredicted RBP15.26■□□□□ 0.03
SPIN3-239ENST00000640463 ATAD5Q96QE3 1844 aa15.26■□□□□ 0.03
SPIN3-239ENST00000640463 ASTN1O14525 1302 aa15.26■□□□□ 0.03
SPIN3-239ENST00000640463 TMCO5BA8MYB1 307 aa15.26■□□□□ 0.03
SPIN3-239ENST00000640463 EIF3HO15372 352 aaKnown RBP eCLIP15.26■□□□□ 0.03
SPIN3-239ENST00000640463 CHMP2AO43633 222 aa15.26■□□□□ 0.03
SPIN3-239ENST00000640463 KIF4AO95239 1232 aa15.26■□□□□ 0.03
SPIN3-239ENST00000640463 ZNF76P36508 570 aa15.26■□□□□ 0.03
SPIN3-239ENST00000640463 CORO7P57737 925 aa15.26■□□□□ 0.03
SPIN3-239ENST00000640463 JAG1P78504 1218 aa15.26■□□□□ 0.03
SPIN3-239ENST00000640463 HLTFQ14527 1009 aaKnown RBP eCLIP15.26■□□□□ 0.03
SPIN3-239ENST00000640463 IQCKQ8N0W5 287 aa15.26■□□□□ 0.03
SPIN3-239ENST00000640463 GCNT4Q9P109 453 aa15.26■□□□□ 0.03
SPIN3-239ENST00000640463 UBAP1LF5GYI3 381 aa15.26■□□□□ 0.03
SPIN3-239ENST00000640463 CALUO43852 315 aaPredicted RBP15.26■□□□□ 0.03
SPIN3-239ENST00000640463 ZEB2O60315 1214 aa15.26■□□□□ 0.03
SPIN3-239ENST00000640463 NDUFB10O96000 172 aa15.26■□□□□ 0.03
SPIN3-239ENST00000640463 NMT1P30419 496 aaKnown RBP15.26■□□□□ 0.03
SPIN3-239ENST00000640463 EPHA7Q15375 998 aa15.26■□□□□ 0.03
SPIN3-239ENST00000640463 ZC2HC1CQ53FD0 456 aaPredicted RBP15.26■□□□□ 0.03
SPIN3-239ENST00000640463 SEPT12Q8IYM1 358 aa15.26■□□□□ 0.03
SPIN3-239ENST00000640463 GLT8D2Q9H1C3 349 aa15.26■□□□□ 0.03
SPIN3-239ENST00000640463 THSD7AQ9UPZ6 1657 aa15.25■□□□□ 0.03
SPIN3-239ENST00000640463 KLRG2A4D1S0 409 aaPredicted RBP15.25■□□□□ 0.03
SPIN3-239ENST00000640463 ERVK-9P63128 1117 aa15.25■□□□□ 0.03
SPIN3-239ENST00000640463 UBXN2AP68543 259 aa15.25■□□□□ 0.03
SPIN3-239ENST00000640463 AP3B2Q13367 1082 aa15.25■□□□□ 0.03
SPIN3-239ENST00000640463 MKL1Q969V6 931 aa15.25■□□□□ 0.03
SPIN3-239ENST00000640463 EIF2AK1Q9BQI3 630 aaKnown RBP15.25■□□□□ 0.03
SPIN3-239ENST00000640463 SIX2Q9NPC8 291 aa15.25■□□□□ 0.03
SPIN3-239ENST00000640463 NYAP2Q9P242 653 aa15.25■□□□□ 0.03
SPIN3-239ENST00000640463 PDXKO00764 312 aa15.25■□□□□ 0.03
SPIN3-239ENST00000640463 TBCAO75347 108 aaKnown RBP15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms