RNA–Protein interactions for RNA: ENST00000640393.1

RTTN-217, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 1,357 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-217ENST00000640393 IGDCC4Q8TDY8 1250 aa7.81□□□□□ -1.16
RTTN-217ENST00000640393 DACT3Q96B18 629 aaPredicted RBP7.81□□□□□ -1.16
RTTN-217ENST00000640393 PCDH18Q9HCL0 1135 aa7.81□□□□□ -1.16
RTTN-217ENST00000640393 DLL4Q9NR61 685 aa7.81□□□□□ -1.16
RTTN-217ENST00000640393 LCHNA4D1U4 455 aa7.8□□□□□ -1.16
RTTN-217ENST00000640393 AOAHP28039 575 aa7.8□□□□□ -1.16
RTTN-217ENST00000640393 HERVK_113P62684 666 aa7.8□□□□□ -1.16
RTTN-217ENST00000640393 HTRA3P83110 453 aa7.8□□□□□ -1.16
RTTN-217ENST00000640393 DHCR24Q15392 516 aa7.8□□□□□ -1.16
RTTN-217ENST00000640393 LRRC56Q8IYG6 542 aaPredicted RBP7.8□□□□□ -1.16
RTTN-217ENST00000640393 DTX3Q8N9I9 347 aa7.8□□□□□ -1.16
RTTN-217ENST00000640393 WDR48Q8TAF3 677 aa7.8□□□□□ -1.16
RTTN-217ENST00000640393 RTF1Q92541 710 aaKnown RBP7.8□□□□□ -1.16
RTTN-217ENST00000640393 IFT22Q9H7X7 185 aa7.8□□□□□ -1.16
RTTN-217ENST00000640393 INCENPQ9NQS7 918 aa7.8□□□□□ -1.16
RTTN-217ENST00000640393 HSPBP1Q9NZL4 362 aa7.8□□□□□ -1.16
RTTN-217ENST00000640393 BTBD7Q9P203 1132 aa7.8□□□□□ -1.16
RTTN-217ENST00000640393 SPO11Q9Y5K1 396 aa7.8□□□□□ -1.16
RTTN-217ENST00000640393 GOLGA6L22H0YM25 854 aa7.79□□□□□ -1.16
RTTN-217ENST00000640393 FFAR3O14843 346 aa7.79□□□□□ -1.16
RTTN-217ENST00000640393 TGM5O43548 720 aa7.79□□□□□ -1.16
RTTN-217ENST00000640393 APOL3O95236 402 aa7.79□□□□□ -1.16
RTTN-217ENST00000640393 CYP17A1P05093 508 aa7.79□□□□□ -1.16
RTTN-217ENST00000640393 VIL1P09327 827 aaKnown RBP7.79□□□□□ -1.16
RTTN-217ENST00000640393 CANXP27824 592 aaKnown RBP7.79□□□□□ -1.16
RTTN-217ENST00000640393 SDHAP31040 664 aa7.79□□□□□ -1.16
RTTN-217ENST00000640393 IL13P35225 146 aa7.79□□□□□ -1.16
RTTN-217ENST00000640393 MLLT6P55198 1093 aaPredicted RBP7.79□□□□□ -1.16
RTTN-217ENST00000640393 EVA1CP58658 441 aa7.79□□□□□ -1.16
RTTN-217ENST00000640393 MCTP2Q6DN12 878 aa7.79□□□□□ -1.16
RTTN-217ENST00000640393 TRMT10BQ6PF06 316 aaKnown RBP7.79□□□□□ -1.16
RTTN-217ENST00000640393 LHFPL2Q6ZUX7 228 aa7.79□□□□□ -1.16
RTTN-217ENST00000640393 TOX2Q96NM4 488 aa7.79□□□□□ -1.16
RTTN-217ENST00000640393 MS4A5Q9H3V2 200 aa7.79□□□□□ -1.16
RTTN-217ENST00000640393 IL18BPO95998 194 aa7.78□□□□□ -1.16
RTTN-217ENST00000640393 LSSP48449 732 aa7.78□□□□□ -1.16
RTTN-217ENST00000640393 TMPRSS15P98073 1019 aa7.78□□□□□ -1.16
RTTN-217ENST00000640393 OCRLQ01968 901 aa7.78□□□□□ -1.16
RTTN-217ENST00000640393 TCERG1LQ5VWI1 586 aa7.78□□□□□ -1.16
RTTN-217ENST00000640393 HDGFL2Q7Z4V5 671 aaPredicted RBP7.78□□□□□ -1.16
RTTN-217ENST00000640393 SAPCD2Q86UD0 394 aa7.78□□□□□ -1.16
RTTN-217ENST00000640393 CILP2Q8IUL8 1156 aa7.78□□□□□ -1.16
RTTN-217ENST00000640393 AFAP1L2Q8N4X5 818 aa7.78□□□□□ -1.16
RTTN-217ENST00000640393 TUBGCP5Q96RT8 1024 aa7.78□□□□□ -1.16
RTTN-217ENST00000640393 AMNQ9BXJ7 453 aa7.78□□□□□ -1.16
RTTN-217ENST00000640393 EMC7Q9NPA0 242 aa7.78□□□□□ -1.16
RTTN-217ENST00000640393 GALNT8Q9NY28 637 aa7.78□□□□□ -1.16
RTTN-217ENST00000640393 DBX1A6NMT0 343 aa7.77□□□□□ -1.17
RTTN-217ENST00000640393 RAB11FIP3O75154 756 aa7.77□□□□□ -1.17
RTTN-217ENST00000640393 CPEP16870 476 aa7.77□□□□□ -1.17
RTTN-217ENST00000640393 SARSP49591 514 aaKnown RBP7.77□□□□□ -1.17
RTTN-217ENST00000640393 DDB1Q16531 1140 aa7.77□□□□□ -1.17
RTTN-217ENST00000640393 VWA3BQ502W6 1294 aa7.77□□□□□ -1.17
RTTN-217ENST00000640393 BROXQ5VW32 411 aa7.77□□□□□ -1.17
RTTN-217ENST00000640393 ESRP1Q6NXG1 681 aaKnown RBP7.77□□□□□ -1.17
RTTN-217ENST00000640393 DDX42Q86XP3 938 aaKnown RBP eCLIP7.77□□□□□ -1.17
RTTN-217ENST00000640393 EFHBQ8N7U6 833 aa7.77□□□□□ -1.17
RTTN-217ENST00000640393 L2HGDHQ9H9P8 463 aa7.77□□□□□ -1.17
RTTN-217ENST00000640393 NTMQ9P121 344 aa7.77□□□□□ -1.17
RTTN-217ENST00000640393 COL4A3BPQ9Y5P4 624 aa7.77□□□□□ -1.17
RTTN-217ENST00000640393 BPIP17213 487 aa7.76□□□□□ -1.17
RTTN-217ENST00000640393 POU3F3P20264 500 aaPredicted RBP7.76□□□□□ -1.17
RTTN-217ENST00000640393 ADCY8P40145 1251 aa7.76□□□□□ -1.17
RTTN-217ENST00000640393 AMPD3Q01432 767 aa7.76□□□□□ -1.17
RTTN-217ENST00000640393 SLC6A3Q01959 620 aa7.76□□□□□ -1.17
RTTN-217ENST00000640393 STAT4Q14765 748 aa7.76□□□□□ -1.17
RTTN-217ENST00000640393 PTPROQ16827 1216 aa7.76□□□□□ -1.17
RTTN-217ENST00000640393 TMEM151BQ8IW70 566 aa7.76□□□□□ -1.17
RTTN-217ENST00000640393 WDR66Q8TBY9 1149 aa7.76□□□□□ -1.17
RTTN-217ENST00000640393 C16orf92Q96LL3 132 aa7.76□□□□□ -1.17
RTTN-217ENST00000640393 MAGEL2Q9UJ55 1249 aa7.76□□□□□ -1.17
RTTN-217ENST00000640393 ASB1Q9Y576 335 aa7.76□□□□□ -1.17
RTTN-217ENST00000640393 UBA6A0AVT1 1052 aaPredicted RBP7.75□□□□□ -1.17
RTTN-217ENST00000640393 ZEB2O60315 1214 aa7.75□□□□□ -1.17
RTTN-217ENST00000640393 MPIG6BO95866 241 aa7.75□□□□□ -1.17
RTTN-217ENST00000640393 ECE1P42892 770 aa7.75□□□□□ -1.17
RTTN-217ENST00000640393 RGS3P49796 1198 aa7.75□□□□□ -1.17
RTTN-217ENST00000640393 SMAD3P84022 425 aaKnown RBP7.75□□□□□ -1.17
RTTN-217ENST00000640393 DLX2Q07687 328 aaPredicted RBP7.75□□□□□ -1.17
RTTN-217ENST00000640393 FAM50AQ14320 339 aaKnown RBP7.75□□□□□ -1.17
RTTN-217ENST00000640393 SMAD2Q15796 467 aaKnown RBP7.75□□□□□ -1.17
RTTN-217ENST00000640393 WDR72Q3MJ13 1102 aa7.75□□□□□ -1.17
RTTN-217ENST00000640393 PRAMEF9Q5VWM5 478 aa7.75□□□□□ -1.17
RTTN-217ENST00000640393 ZSCAN18Q8TBC5 510 aaPredicted RBP7.75□□□□□ -1.17
RTTN-217ENST00000640393 FOXRED1Q96CU9 486 aaPredicted RBP7.75□□□□□ -1.17
RTTN-217ENST00000640393 SPATA25Q9BR10 227 aa7.75□□□□□ -1.17
RTTN-217ENST00000640393 PCDH12Q9NPG4 1184 aa7.75□□□□□ -1.17
RTTN-217ENST00000640393 NOC2LQ9Y3T9 749 aaKnown RBP7.75□□□□□ -1.17
RTTN-217ENST00000640393 EYA4O95677 639 aa7.74□□□□□ -1.17
RTTN-217ENST00000640393 CYP1A1P04798 512 aaPredicted RBP7.74□□□□□ -1.17
RTTN-217ENST00000640393 IBSPP21815 317 aaPredicted RBP7.74□□□□□ -1.17
RTTN-217ENST00000640393 RPL13P26373 211 aaKnown RBP7.74□□□□□ -1.17
RTTN-217ENST00000640393 LSP1P33241 339 aa7.74□□□□□ -1.17
RTTN-217ENST00000640393 IQSEC1Q6DN90 963 aa7.74□□□□□ -1.17
RTTN-217ENST00000640393 RTN4RL1Q86UN2 441 aaPredicted RBP7.74□□□□□ -1.17
RTTN-217ENST00000640393 CARFQ8N187 725 aa7.74□□□□□ -1.17
RTTN-217ENST00000640393 LINC01356Q8N9X3 169 aa7.74□□□□□ -1.17
RTTN-217ENST00000640393 TP53I13Q8NBR0 393 aaPredicted RBP7.74□□□□□ -1.17
RTTN-217ENST00000640393 SLC5A5Q92911 643 aa7.74□□□□□ -1.17
RTTN-217ENST00000640393 GPATCH3Q96I76 525 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms