RNA–Protein interactions for RNA: ENST00000639695.1

RFC1-217, Transcript of replication factor C subunit 1, humanhuman

TSL 5 BASIC

Gene RFC1, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-217ENST00000639695 MT-CO1P00395 513 aa8.22□□□□□ -1.09
RFC1-217ENST00000639695 CYP2C19P33261 490 aa8.22□□□□□ -1.09
RFC1-217ENST00000639695 IARSP41252 1262 aaKnown RBP8.22□□□□□ -1.09
RFC1-217ENST00000639695 SAFB2Q14151 953 aaKnown RBP eCLIP8.22□□□□□ -1.09
RFC1-217ENST00000639695 ZNF174Q15697 407 aa8.22□□□□□ -1.09
RFC1-217ENST00000639695 INAVAQ3KP66 663 aa8.22□□□□□ -1.09
RFC1-217ENST00000639695 HSF5Q4G112 596 aaPredicted RBP8.22□□□□□ -1.09
RFC1-217ENST00000639695 CISD2Q8N5K1 135 aaKnown RBP8.22□□□□□ -1.09
RFC1-217ENST00000639695 NAT16Q8N8M0 369 aa8.22□□□□□ -1.09
RFC1-217ENST00000639695 PTCHD1Q96NR3 888 aa8.22□□□□□ -1.09
RFC1-217ENST00000639695 CDADC1Q9BWV3 514 aa8.22□□□□□ -1.09
RFC1-217ENST00000639695 MKS1Q9NXB0 559 aa8.22□□□□□ -1.09
RFC1-217ENST00000639695 VSTM5A8MXK1 200 aa8.21□□□□□ -1.1
RFC1-217ENST00000639695 PF4V1P10720 104 aa8.21□□□□□ -1.1
RFC1-217ENST00000639695 RPL11P62913 178 aaKnown RBP8.21□□□□□ -1.1
RFC1-217ENST00000639695 KRT85P78386 507 aa8.21□□□□□ -1.1
RFC1-217ENST00000639695 LACTBP83111 547 aaPredicted RBP8.21□□□□□ -1.1
RFC1-217ENST00000639695 GTF2H3Q13889 308 aa8.21□□□□□ -1.1
RFC1-217ENST00000639695 BROXQ5VW32 411 aa8.21□□□□□ -1.1
RFC1-217ENST00000639695 CNKSR3Q6P9H4 555 aa8.21□□□□□ -1.1
RFC1-217ENST00000639695 EP400NLQ6ZTU2 488 aa8.21□□□□□ -1.1
RFC1-217ENST00000639695 AMOTL1Q8IY63 956 aa8.21□□□□□ -1.1
RFC1-217ENST00000639695 CPA6Q8N4T0 437 aa8.21□□□□□ -1.1
RFC1-217ENST00000639695 TP53I13Q8NBR0 393 aaPredicted RBP8.21□□□□□ -1.1
RFC1-217ENST00000639695 CLRN3Q8NCR9 226 aa8.21□□□□□ -1.1
RFC1-217ENST00000639695 FBXO41Q8TF61 875 aa8.21□□□□□ -1.1
RFC1-217ENST00000639695 KCNJ15Q99712 375 aa8.21□□□□□ -1.1
RFC1-217ENST00000639695 BOCQ9BWV1 1114 aa8.21□□□□□ -1.1
RFC1-217ENST00000639695 VTA1Q9NP79 307 aa8.21□□□□□ -1.1
RFC1-217ENST00000639695 C14orf119Q9NWQ9 140 aa8.21□□□□□ -1.1
RFC1-217ENST00000639695 OBP2AQ9NY56 170 aa8.21□□□□□ -1.1
RFC1-217ENST00000639695 FGF10O15520 208 aaPredicted RBP8.2□□□□□ -1.1
RFC1-217ENST00000639695 PRPF3O43395 683 aaKnown RBP8.2□□□□□ -1.1
RFC1-217ENST00000639695 RBP3P10745 1247 aa8.2□□□□□ -1.1
RFC1-217ENST00000639695 LSP1P33241 339 aa8.2□□□□□ -1.1
RFC1-217ENST00000639695 NCKAP1LP55160 1127 aa8.2□□□□□ -1.1
RFC1-217ENST00000639695 LAPTM5Q13571 262 aa8.2□□□□□ -1.1
RFC1-217ENST00000639695 VPS72Q15906 364 aa8.2□□□□□ -1.1
RFC1-217ENST00000639695 INF2Q27J81 1249 aa8.2□□□□□ -1.1
RFC1-217ENST00000639695 LONRF3Q496Y0 759 aa8.2□□□□□ -1.1
RFC1-217ENST00000639695 RTP2Q5QGT7 225 aa8.2□□□□□ -1.1
RFC1-217ENST00000639695 TMEM240Q5SV17 173 aa8.2□□□□□ -1.1
RFC1-217ENST00000639695 CYP2R1Q6VVX0 501 aa8.2□□□□□ -1.1
RFC1-217ENST00000639695 TSHZ1Q6ZSZ6 1077 aa8.2□□□□□ -1.1
RFC1-217ENST00000639695 OTOP1Q7RTM1 612 aa8.2□□□□□ -1.1
RFC1-217ENST00000639695 TMC6Q7Z403 805 aa8.2□□□□□ -1.1
RFC1-217ENST00000639695 LDHDQ86WU2 507 aa8.2□□□□□ -1.1
RFC1-217ENST00000639695 CPNE8Q86YQ8 564 aa8.2□□□□□ -1.1
RFC1-217ENST00000639695 TPH2Q8IWU9 490 aa8.2□□□□□ -1.1
RFC1-217ENST00000639695 C1orf162Q8NEQ5 155 aaPredicted RBP8.2□□□□□ -1.1
RFC1-217ENST00000639695 CLIP3Q96DZ5 547 aa8.2□□□□□ -1.1
RFC1-217ENST00000639695 AP5S1Q9NUS5 200 aa8.2□□□□□ -1.1
RFC1-217ENST00000639695 CLDND1Q9NY35 253 aa8.2□□□□□ -1.1
RFC1-217ENST00000639695 NOC2LQ9Y3T9 749 aaKnown RBP8.2□□□□□ -1.1
RFC1-217ENST00000639695 SLC12A8A0AV02 714 aa8.19□□□□□ -1.1
RFC1-217ENST00000639695 NPHS1O60500 1241 aa8.19□□□□□ -1.1
RFC1-217ENST00000639695 KRT37O76014 449 aa8.19□□□□□ -1.1
RFC1-217ENST00000639695 CELA3BP08861 270 aa8.19□□□□□ -1.1
RFC1-217ENST00000639695 PDE6AP16499 860 aa8.19□□□□□ -1.1
RFC1-217ENST00000639695 PURAQ00577 322 aaKnown RBP8.19□□□□□ -1.1
RFC1-217ENST00000639695 PCBP2Q15366 365 aaKnown RBP eCLIP8.19□□□□□ -1.1
RFC1-217ENST00000639695 DBX2Q6ZNG2 339 aa8.19□□□□□ -1.1
RFC1-217ENST00000639695 RASSF3Q86WH2 238 aa8.19□□□□□ -1.1
RFC1-217ENST00000639695 FAM9AQ8IZU1 332 aaPredicted RBP8.19□□□□□ -1.1
RFC1-217ENST00000639695 H2AFY2Q9P0M6 372 aaPredicted RBP8.19□□□□□ -1.1
RFC1-217ENST00000639695 CBLCQ9ULV8 474 aa8.19□□□□□ -1.1
RFC1-217ENST00000639695 PCDHA5Q9Y5H7 936 aa8.19□□□□□ -1.1
RFC1-217ENST00000639695 KLHL33A6NCF5 533 aa8.18□□□□□ -1.1
RFC1-217ENST00000639695 LDHAP00338 332 aaKnown RBP8.18□□□□□ -1.1
RFC1-217ENST00000639695 LTFP02788 710 aa8.18□□□□□ -1.1
RFC1-217ENST00000639695 NBPF7P0C2Y1 421 aaPredicted RBP8.18□□□□□ -1.1
RFC1-217ENST00000639695 BCL6P41182 706 aa8.18□□□□□ -1.1
RFC1-217ENST00000639695 SPIRE1Q08AE8 756 aa8.18□□□□□ -1.1
RFC1-217ENST00000639695 SLCO6A1Q86UG4 719 aa8.18□□□□□ -1.1
RFC1-217ENST00000639695 OSTM1Q86WC4 334 aa8.18□□□□□ -1.1
RFC1-217ENST00000639695 HSPBAP1Q96EW2 488 aa8.18□□□□□ -1.1
RFC1-217ENST00000639695 TMEM169Q96HH4 297 aa8.18□□□□□ -1.1
RFC1-217ENST00000639695 FCRL2Q96LA5 508 aaPredicted RBP8.18□□□□□ -1.1
RFC1-217ENST00000639695 NUP88Q99567 741 aaPredicted RBP8.18□□□□□ -1.1
RFC1-217ENST00000639695 PCIF1Q9H4Z3 704 aa8.18□□□□□ -1.1
RFC1-217ENST00000639695 ERVK13-1Q9NX77 482 aa8.18□□□□□ -1.1
RFC1-217ENST00000639695 SPO11Q9Y5K1 396 aa8.18□□□□□ -1.1
RFC1-217ENST00000639695 GOLGA8AA7E2F4 631 aa8.17□□□□□ -1.1
RFC1-217ENST00000639695 GOLGA8BA8MQT2 603 aa8.17□□□□□ -1.1
RFC1-217ENST00000639695 H7BY64 318 aa8.17□□□□□ -1.1
RFC1-217ENST00000639695 ERC2O15083 957 aa8.17□□□□□ -1.1
RFC1-217ENST00000639695 IL33O95760 270 aa8.17□□□□□ -1.1
RFC1-217ENST00000639695 GNAT1P11488 350 aa8.17□□□□□ -1.1
RFC1-217ENST00000639695 SCAND1P57086 179 aa8.17□□□□□ -1.1
RFC1-217ENST00000639695 GPR19Q15760 415 aa8.17□□□□□ -1.1
RFC1-217ENST00000639695 EFCAB2Q5VUJ9 269 aa8.17□□□□□ -1.1
RFC1-217ENST00000639695 SVIPQ8NHG7 77 aa8.17□□□□□ -1.1
RFC1-217ENST00000639695 PWWP2AQ96N64 755 aa8.17□□□□□ -1.1
RFC1-217ENST00000639695 TNFRSF10DQ9UBN6 386 aa8.17□□□□□ -1.1
RFC1-217ENST00000639695 C7orf72A4D263 438 aa8.16□□□□□ -1.1
RFC1-217ENST00000639695 NUDT19A8MXV4 375 aa8.16□□□□□ -1.1
RFC1-217ENST00000639695 XPOTO43592 962 aaKnown RBP8.16□□□□□ -1.1
RFC1-217ENST00000639695 CREB3O43889 395 aa8.16□□□□□ -1.1
RFC1-217ENST00000639695 HIP1RO75146 1068 aa8.16□□□□□ -1.1
RFC1-217ENST00000639695 MPOP05164 745 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms