RNA–Protein interactions for RNA: ENST00000639290.1

CCDC7-213, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,542 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-213ENST00000639290 LPAL2Q16609 132 aa4.31□□□□□ -1.72
CCDC7-213ENST00000639290 FAM47CQ5HY64 1035 aa4.31□□□□□ -1.72
CCDC7-213ENST00000639290 XP32Q5T750 250 aa4.31□□□□□ -1.72
CCDC7-213ENST00000639290 THSD4Q6ZMP0 1018 aa4.31□□□□□ -1.72
CCDC7-213ENST00000639290 GALNT15Q8N3T1 639 aa4.31□□□□□ -1.72
CCDC7-213ENST00000639290 CHCHD4Q8N4Q1 142 aa4.31□□□□□ -1.72
CCDC7-213ENST00000639290 PIP4K2CQ8TBX8 421 aa4.31□□□□□ -1.72
CCDC7-213ENST00000639290 MDM1Q8TC05 714 aa4.31□□□□□ -1.72
CCDC7-213ENST00000639290 MORC4Q8TE76 937 aa4.31□□□□□ -1.72
CCDC7-213ENST00000639290 GLG1Q92896 1179 aa4.31□□□□□ -1.72
CCDC7-213ENST00000639290 WNT2BQ93097 391 aa4.31□□□□□ -1.72
CCDC7-213ENST00000639290 DDX4Q9NQI0 724 aaKnown RBP4.31□□□□□ -1.72
CCDC7-213ENST00000639290 PLEKHB1Q9UF11 243 aaPredicted RBP4.31□□□□□ -1.72
CCDC7-213ENST00000639290 FOCADQ5VW36 1801 aa4.3□□□□□ -1.72
CCDC7-213ENST00000639290 GPR75-ASB3A0A0A6YYF3 556 aa4.3□□□□□ -1.72
CCDC7-213ENST00000639290 USP17L12C9JPN9 530 aa4.3□□□□□ -1.72
CCDC7-213ENST00000639290 USP17L21D6R901 530 aa4.3□□□□□ -1.72
CCDC7-213ENST00000639290 ANXA1P04083 346 aa4.3□□□□□ -1.72
CCDC7-213ENST00000639290 RPL17P18621 184 aaKnown RBP4.3□□□□□ -1.72
CCDC7-213ENST00000639290 SP100P23497 879 aaPredicted RBP4.3□□□□□ -1.72
CCDC7-213ENST00000639290 ZEB1P37275 1124 aaPredicted RBP4.3□□□□□ -1.72
CCDC7-213ENST00000639290 ADCY1Q08828 1119 aa4.3□□□□□ -1.72
CCDC7-213ENST00000639290 MTAPQ13126 283 aa4.3□□□□□ -1.72
CCDC7-213ENST00000639290 SMC1AQ14683 1233 aaKnown RBP4.3□□□□□ -1.72
CCDC7-213ENST00000639290 UBXN2BQ14CS0 331 aa4.3□□□□□ -1.72
CCDC7-213ENST00000639290 ZNF852Q6ZMS4 543 aa4.3□□□□□ -1.72
CCDC7-213ENST00000639290 TMC8Q8IU68 726 aa4.3□□□□□ -1.72
CCDC7-213ENST00000639290 SPEM1Q8N4L4 309 aa4.3□□□□□ -1.72
CCDC7-213ENST00000639290 TTC9Q92623 222 aa4.3□□□□□ -1.72
CCDC7-213ENST00000639290 DDX11Q96FC9 970 aa4.3□□□□□ -1.72
CCDC7-213ENST00000639290 CTAGE1Q96RT6 745 aa4.3□□□□□ -1.72
CCDC7-213ENST00000639290 KATNAL1Q9BW62 490 aa4.3□□□□□ -1.72
CCDC7-213ENST00000639290 FAM217BQ9NTX9 383 aaPredicted RBP4.3□□□□□ -1.72
CCDC7-213ENST00000639290 TSPYL4Q9UJ04 414 aa4.3□□□□□ -1.72
CCDC7-213ENST00000639290 RABGEF1Q9UJ41 708 aa4.3□□□□□ -1.72
CCDC7-213ENST00000639290 PCDHGA10Q9Y5H3 936 aa4.3□□□□□ -1.72
CCDC7-213ENST00000639290 MRPL42Q9Y6G3 142 aaKnown RBP4.3□□□□□ -1.72
CCDC7-213ENST00000639290 KHNYNO15037 678 aaKnown RBP4.3□□□□□ -1.72
CCDC7-213ENST00000639290 GPR37O15354 613 aa4.3□□□□□ -1.72
CCDC7-213ENST00000639290 STAT3P40763 770 aa4.3□□□□□ -1.72
CCDC7-213ENST00000639290 ALDH7A1P49419 539 aaKnown RBP4.3□□□□□ -1.72
CCDC7-213ENST00000639290 HTR4Q13639 388 aa4.3□□□□□ -1.72
CCDC7-213ENST00000639290 LETM2Q2VYF4 491 aa4.3□□□□□ -1.72
CCDC7-213ENST00000639290 SLC44A4Q53GD3 710 aa4.3□□□□□ -1.72
CCDC7-213ENST00000639290 SPTY2D1Q68D10 685 aaPredicted RBP4.3□□□□□ -1.72
CCDC7-213ENST00000639290 MTSS1LQ765P7 747 aa4.3□□□□□ -1.72
CCDC7-213ENST00000639290 NPAS4Q8IUM7 802 aa4.3□□□□□ -1.72
CCDC7-213ENST00000639290 FAM133AQ8N9E0 248 aa4.3□□□□□ -1.72
CCDC7-213ENST00000639290 CHST13Q8NET6 341 aa4.3□□□□□ -1.72
CCDC7-213ENST00000639290 MICAL1Q8TDZ2 1067 aa4.3□□□□□ -1.72
CCDC7-213ENST00000639290 MRPS27Q92552 414 aaKnown RBP4.3□□□□□ -1.72
CCDC7-213ENST00000639290 DNASE1L2Q92874 299 aa4.3□□□□□ -1.72
CCDC7-213ENST00000639290 TRIM34Q9BYJ4 488 aa4.3□□□□□ -1.72
CCDC7-213ENST00000639290 SH2D4AQ9H788 454 aa4.3□□□□□ -1.72
CCDC7-213ENST00000639290 GPRC5CQ9NQ84 441 aa4.3□□□□□ -1.72
CCDC7-213ENST00000639290 MIS18AQ9NYP9 233 aa4.3□□□□□ -1.72
CCDC7-213ENST00000639290 STK39Q9UEW8 545 aa4.3□□□□□ -1.72
CCDC7-213ENST00000639290 DPP7Q9UHL4 492 aa4.3□□□□□ -1.72
CCDC7-213ENST00000639290 GTF2IRD1Q9UHL9 959 aa4.3□□□□□ -1.72
CCDC7-213ENST00000639290 NUDCQ9Y266 331 aa4.3□□□□□ -1.72
CCDC7-213ENST00000639290 PLXNB3Q9ULL4 1909 aa4.29□□□□□ -1.72
CCDC7-213ENST00000639290 RSPH10B2B2RC85 870 aa4.29□□□□□ -1.72
CCDC7-213ENST00000639290 AXIN1O15169 862 aa4.29□□□□□ -1.72
CCDC7-213ENST00000639290 LUC7L3O95232 432 aaKnown RBP4.29□□□□□ -1.72
CCDC7-213ENST00000639290 RSPH10BP0C881 870 aa4.29□□□□□ -1.72
CCDC7-213ENST00000639290 STAG3L1P0CL83 205 aa4.29□□□□□ -1.72
CCDC7-213ENST00000639290 HOXB4P17483 251 aaPredicted RBP4.29□□□□□ -1.72
CCDC7-213ENST00000639290 PPM1AP35813 382 aa4.29□□□□□ -1.72
CCDC7-213ENST00000639290 MBTPS1Q14703 1052 aa4.29□□□□□ -1.72
CCDC7-213ENST00000639290 TMEM132BQ14DG7 1078 aa4.29□□□□□ -1.72
CCDC7-213ENST00000639290 FAM26DQ5JW98 314 aa4.29□□□□□ -1.72
CCDC7-213ENST00000639290 AGMOQ6ZNB7 445 aa4.29□□□□□ -1.72
CCDC7-213ENST00000639290 PRICKLE2Q7Z3G6 844 aa4.29□□□□□ -1.72
CCDC7-213ENST00000639290 LAPTM4BQ86VI4 370 aa4.29□□□□□ -1.72
CCDC7-213ENST00000639290 ANKK1Q8NFD2 765 aa4.29□□□□□ -1.72
CCDC7-213ENST00000639290 NXPE2Q96DL1 559 aa4.29□□□□□ -1.72
CCDC7-213ENST00000639290 CRELD1Q96HD1 420 aa4.29□□□□□ -1.72
CCDC7-213ENST00000639290 FGD4Q96M96 766 aa4.29□□□□□ -1.72
CCDC7-213ENST00000639290 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.29□□□□□ -1.72
CCDC7-213ENST00000639290 DNMT3LQ9UJW3 386 aa4.29□□□□□ -1.72
CCDC7-213ENST00000639290 TRIP12Q14669 1992 aaPredicted RBP4.29□□□□□ -1.72
CCDC7-213ENST00000639290 BCLAF3A2AJT9 711 aaKnown RBP4.29□□□□□ -1.72
CCDC7-213ENST00000639290 CDX4O14627 284 aaPredicted RBP4.29□□□□□ -1.72
CCDC7-213ENST00000639290 MYL3P08590 195 aa4.29□□□□□ -1.72
CCDC7-213ENST00000639290 SLC14A1Q13336 389 aa4.29□□□□□ -1.72
CCDC7-213ENST00000639290 FZD5Q13467 585 aa4.29□□□□□ -1.72
CCDC7-213ENST00000639290 PLS1Q14651 629 aa4.29□□□□□ -1.72
CCDC7-213ENST00000639290 PREPLQ4J6C6 727 aaPredicted RBP4.29□□□□□ -1.72
CCDC7-213ENST00000639290 RARS2Q5T160 578 aaKnown RBP4.29□□□□□ -1.72
CCDC7-213ENST00000639290 BEND3Q5T5X7 828 aa4.29□□□□□ -1.72
CCDC7-213ENST00000639290 TSSK4Q6SA08 328 aa4.29□□□□□ -1.72
CCDC7-213ENST00000639290 NOL8Q76FK4 1167 aaKnown RBP4.29□□□□□ -1.72
CCDC7-213ENST00000639290 SLC34A3Q8N130 599 aa4.29□□□□□ -1.72
CCDC7-213ENST00000639290 TEX13BQ9BXU2 312 aa4.29□□□□□ -1.72
CCDC7-213ENST00000639290 LNP1A1A4G5 178 aa4.28□□□□□ -1.72
CCDC7-213ENST00000639290 U2SURPO15042 1029 aaKnown RBP4.28□□□□□ -1.72
CCDC7-213ENST00000639290 PER2O15055 1255 aa4.28□□□□□ -1.72
CCDC7-213ENST00000639290 SUV39H1O43463 412 aa4.28□□□□□ -1.72
CCDC7-213ENST00000639290 CLASP2O75122 1294 aaKnown RBP4.28□□□□□ -1.72
CCDC7-213ENST00000639290 DKK1O94907 266 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms