RNA–Protein interactions for RNA: ENST00000636843.1

CTSD-208, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,512 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-208ENST00000636843 LMAN2LQ9H0V9 348 aa14.35□□□□□ -0.11
CTSD-208ENST00000636843 AZI2Q9H6S1 392 aa14.35□□□□□ -0.11
CTSD-208ENST00000636843 JPH1Q9HDC5 661 aaPredicted RBP14.35□□□□□ -0.11
CTSD-208ENST00000636843 CD320Q9NPF0 282 aa14.35□□□□□ -0.11
CTSD-208ENST00000636843 RBM28Q9NW13 759 aaKnown RBP14.35□□□□□ -0.11
CTSD-208ENST00000636843 PKD2L1Q9P0L9 805 aa14.35□□□□□ -0.11
CTSD-208ENST00000636843 SLC9A2Q9UBY0 812 aa14.35□□□□□ -0.11
CTSD-208ENST00000636843 FAM50BQ9Y247 325 aa14.35□□□□□ -0.11
CTSD-208ENST00000636843 CDY2AQ9Y6F7 541 aa14.35□□□□□ -0.11
CTSD-208ENST00000636843 SQORQ9Y6N5 450 aa14.35□□□□□ -0.11
CTSD-208ENST00000636843 NFASCO94856 1347 aa14.34□□□□□ -0.11
CTSD-208ENST00000636843 FOSP01100 380 aaPredicted RBP14.34□□□□□ -0.11
CTSD-208ENST00000636843 INSRRP14616 1297 aa14.34□□□□□ -0.11
CTSD-208ENST00000636843 MRPS6P82932 125 aaKnown RBP14.34□□□□□ -0.11
CTSD-208ENST00000636843 IER5Q5VY09 327 aa14.34□□□□□ -0.11
CTSD-208ENST00000636843 KHSRPQ92945 711 aaKnown RBP eCLIP14.34□□□□□ -0.11
CTSD-208ENST00000636843 CLP1Q92989 425 aaKnown RBP14.34□□□□□ -0.11
CTSD-208ENST00000636843 PCYT2Q99447 389 aa14.34□□□□□ -0.11
CTSD-208ENST00000636843 SDF4Q9BRK5 362 aa14.34□□□□□ -0.11
CTSD-208ENST00000636843 RC3H2Q9HBD1 1191 aaKnown RBP14.34□□□□□ -0.11
CTSD-208ENST00000636843 RIC8AQ9NPQ8 531 aa14.34□□□□□ -0.11
CTSD-208ENST00000636843 KCNH7Q9NS40 1196 aa14.34□□□□□ -0.11
CTSD-208ENST00000636843 ZDHHC9Q9Y397 364 aa14.34□□□□□ -0.11
CTSD-208ENST00000636843 HCN4Q9Y3Q4 1203 aa14.34□□□□□ -0.11
CTSD-208ENST00000636843 ADGRA3Q8IWK6 1321 aa14.34□□□□□ -0.11
CTSD-208ENST00000636843 IL9P15248 144 aa14.33□□□□□ -0.12
CTSD-208ENST00000636843 RPS6KB1P23443 525 aa14.33□□□□□ -0.12
CTSD-208ENST00000636843 SSTR3P32745 418 aaPredicted RBP14.33□□□□□ -0.12
CTSD-208ENST00000636843 IGBP1P78318 339 aa14.33□□□□□ -0.12
CTSD-208ENST00000636843 PKP1Q13835 747 aa14.33□□□□□ -0.12
CTSD-208ENST00000636843 PPP1R18Q6NYC8 613 aa14.33□□□□□ -0.12
CTSD-208ENST00000636843 APOA5Q6Q788 366 aa14.33□□□□□ -0.12
CTSD-208ENST00000636843 PLPPR4Q7Z2D5 763 aa14.33□□□□□ -0.12
CTSD-208ENST00000636843 ZNF689Q96CS4 500 aaPredicted RBP14.33□□□□□ -0.12
CTSD-208ENST00000636843 FTHL17Q9BXU8 183 aa14.33□□□□□ -0.12
CTSD-208ENST00000636843 H3BQ06 376 aaPredicted RBP14.32□□□□□ -0.12
CTSD-208ENST00000636843 hCG_1984214I3L0E3 225 aa14.32□□□□□ -0.12
CTSD-208ENST00000636843 M0QZ92 97 aa14.32□□□□□ -0.12
CTSD-208ENST00000636843 LINC00271P0C7V0 271 aa14.32□□□□□ -0.12
CTSD-208ENST00000636843 PDIA4P13667 645 aaKnown RBP14.32□□□□□ -0.12
CTSD-208ENST00000636843 NAPAP54920 295 aa14.32□□□□□ -0.12
CTSD-208ENST00000636843 BTG3Q14201 252 aaPredicted RBP14.32□□□□□ -0.12
CTSD-208ENST00000636843 L1TD1Q5T7N2 865 aaKnown RBP14.32□□□□□ -0.12
CTSD-208ENST00000636843 WWC2Q6AWC2 1192 aa14.32□□□□□ -0.12
CTSD-208ENST00000636843 FAM43BQ6ZT52 329 aaPredicted RBP14.32□□□□□ -0.12
CTSD-208ENST00000636843 ZNF713Q8N859 430 aaPredicted RBP14.32□□□□□ -0.12
CTSD-208ENST00000636843 NEK1Q96PY6 1258 aa14.32□□□□□ -0.12
CTSD-208ENST00000636843 PLVAPQ9BX97 442 aa14.32□□□□□ -0.12
CTSD-208ENST00000636843 FAM49AQ9H0Q0 323 aaPredicted RBP14.32□□□□□ -0.12
CTSD-208ENST00000636843 GLT8D2Q9H1C3 349 aa14.32□□□□□ -0.12
CTSD-208ENST00000636843 C11orf16Q9NQ32 467 aa14.32□□□□□ -0.12
CTSD-208ENST00000636843 TRPC6Q9Y210 931 aa14.32□□□□□ -0.12
CTSD-208ENST00000636843 PCDHA2Q9Y5H9 948 aa14.32□□□□□ -0.12
CTSD-208ENST00000636843 CNTNAP5Q8WYK1 1306 aa14.32□□□□□ -0.12
CTSD-208ENST00000636843 DGKIO75912 1065 aa14.31□□□□□ -0.12
CTSD-208ENST00000636843 HMGB1P09429 215 aaKnown RBP14.31□□□□□ -0.12
CTSD-208ENST00000636843 CPA1P15085 419 aa14.31□□□□□ -0.12
CTSD-208ENST00000636843 CD52P31358 61 aa14.31□□□□□ -0.12
CTSD-208ENST00000636843 SLC26A2P50443 739 aa14.31□□□□□ -0.12
CTSD-208ENST00000636843 STAT5BP51692 787 aa14.31□□□□□ -0.12
CTSD-208ENST00000636843 ACTR2P61160 394 aa14.31□□□□□ -0.12
CTSD-208ENST00000636843 PLCB4Q15147 1175 aa14.31□□□□□ -0.12
CTSD-208ENST00000636843 RTN1Q16799 776 aa14.31□□□□□ -0.12
CTSD-208ENST00000636843 CEP55Q53EZ4 464 aa14.31□□□□□ -0.12
CTSD-208ENST00000636843 MCTP1Q6DN14 999 aa14.31□□□□□ -0.12
CTSD-208ENST00000636843 EP400NLQ6ZTU2 488 aa14.31□□□□□ -0.12
CTSD-208ENST00000636843 NME8Q8N427 588 aa14.31□□□□□ -0.12
CTSD-208ENST00000636843 CYP2W1Q8TAV3 490 aa14.31□□□□□ -0.12
CTSD-208ENST00000636843 AGO3Q9H9G7 860 aaKnown RBP14.31□□□□□ -0.12
CTSD-208ENST00000636843 CLDND1Q9NY35 253 aa14.31□□□□□ -0.12
CTSD-208ENST00000636843 PRKAG3Q9UGI9 489 aa14.31□□□□□ -0.12
CTSD-208ENST00000636843 SMC3Q9UQE7 1217 aa14.31□□□□□ -0.12
CTSD-208ENST00000636843 TRPV2Q9Y5S1 764 aa14.31□□□□□ -0.12
CTSD-208ENST00000636843 TTC3P53804 2025 aa14.31□□□□□ -0.12
CTSD-208ENST00000636843 MYO7AQ13402 2215 aa14.31□□□□□ -0.12
CTSD-208ENST00000636843 GRM6O15303 877 aa14.31□□□□□ -0.12
CTSD-208ENST00000636843 ZBTB43O43298 467 aa14.31□□□□□ -0.12
CTSD-208ENST00000636843 ATG7O95352 703 aa14.31□□□□□ -0.12
CTSD-208ENST00000636843 ARP10275 920 aa14.31□□□□□ -0.12
CTSD-208ENST00000636843 ALADP13716 330 aa14.31□□□□□ -0.12
CTSD-208ENST00000636843 ADCY7P51828 1080 aa14.31□□□□□ -0.12
CTSD-208ENST00000636843 EXOSC10Q01780 885 aaKnown RBP14.31□□□□□ -0.12
CTSD-208ENST00000636843 FUT2Q10981 343 aa14.31□□□□□ -0.12
CTSD-208ENST00000636843 AP3B2Q13367 1082 aa14.31□□□□□ -0.12
CTSD-208ENST00000636843 CTC1Q2NKJ3 1217 aa14.31□□□□□ -0.12
CTSD-208ENST00000636843 KLHL40Q2TBA0 621 aa14.31□□□□□ -0.12
CTSD-208ENST00000636843 DHX32Q7L7V1 743 aaKnown RBP14.31□□□□□ -0.12
CTSD-208ENST00000636843 NPAS4Q8IUM7 802 aa14.31□□□□□ -0.12
CTSD-208ENST00000636843 CMTR2Q8IYT2 770 aaKnown RBP14.31□□□□□ -0.12
CTSD-208ENST00000636843 ANO3Q9BYT9 981 aa14.31□□□□□ -0.12
CTSD-208ENST00000636843 AGO4Q9HCK5 861 aaKnown RBP14.31□□□□□ -0.12
CTSD-208ENST00000636843 V9GY48 417 aaPredicted RBP14.31□□□□□ -0.12
CTSD-208ENST00000636843 RALGAPA2Q2PPJ7 1873 aa14.3□□□□□ -0.12
CTSD-208ENST00000636843 SMIM35A0A1B0GVV1 85 aa14.3□□□□□ -0.12
CTSD-208ENST00000636843 POTEB3A0JP26 581 aa14.3□□□□□ -0.12
CTSD-208ENST00000636843 FAM86C2PA6NEL3 165 aa14.3□□□□□ -0.12
CTSD-208ENST00000636843 STXBP3O00186 592 aa14.3□□□□□ -0.12
CTSD-208ENST00000636843 MEIS1O00470 390 aa14.3□□□□□ -0.12
CTSD-208ENST00000636843 STAG3L1P0CL83 205 aa14.3□□□□□ -0.12
CTSD-208ENST00000636843 SREBF1P36956 1147 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms