RNA–Protein interactions for RNA: ENST00000636674.1

CLN6-215, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 2,005 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-215ENST00000636674 SH2D3CQ8N5H7 860 aa15.92■□□□□ 0.14
CLN6-215ENST00000636674 RBM17Q96I25 401 aaKnown RBP15.92■□□□□ 0.14
CLN6-215ENST00000636674 ANO3Q9BYT9 981 aa15.92■□□□□ 0.14
CLN6-215ENST00000636674 SPON1Q9HCB6 807 aa15.92■□□□□ 0.14
CLN6-215ENST00000636674 ARMCX3Q9UH62 379 aaPredicted RBP15.92■□□□□ 0.14
CLN6-215ENST00000636674 INTUQ9ULD6 942 aa15.92■□□□□ 0.14
CLN6-215ENST00000636674 PACSIN2Q9UNF0 486 aaPredicted RBP15.92■□□□□ 0.14
CLN6-215ENST00000636674 STK24Q9Y6E0 443 aa15.92■□□□□ 0.14
CLN6-215ENST00000636674 NPHP3-ACAD11A0A0J9YXS1 232 aa15.92■□□□□ 0.14
CLN6-215ENST00000636674 PDXKO00764 312 aa15.92■□□□□ 0.14
CLN6-215ENST00000636674 NDUFAB1O14561 156 aa15.92■□□□□ 0.14
CLN6-215ENST00000636674 SLC16A3O15427 465 aaKnown RBP15.92■□□□□ 0.14
CLN6-215ENST00000636674 LSP1P33241 339 aa15.92■□□□□ 0.14
CLN6-215ENST00000636674 KNOP1Q1ED39 458 aaKnown RBP15.92■□□□□ 0.14
CLN6-215ENST00000636674 SLFN11Q7Z7L1 901 aa15.92■□□□□ 0.14
CLN6-215ENST00000636674 SUGP1Q8IWZ8 645 aaKnown RBP15.92■□□□□ 0.14
CLN6-215ENST00000636674 RNPC3Q96LT9 517 aaKnown RBP15.92■□□□□ 0.14
CLN6-215ENST00000636674 EPN3Q9H201 632 aa15.92■□□□□ 0.14
CLN6-215ENST00000636674 DDX4Q9NQI0 724 aaKnown RBP15.92■□□□□ 0.14
CLN6-215ENST00000636674 POLLQ9UGP5 575 aa15.92■□□□□ 0.14
CLN6-215ENST00000636674 NAGPAQ9UK23 515 aa15.92■□□□□ 0.14
CLN6-215ENST00000636674 CCDC188H7C350 402 aa15.91■□□□□ 0.14
CLN6-215ENST00000636674 FLOT1O75955 427 aa15.91■□□□□ 0.14
CLN6-215ENST00000636674 ERLIN2O94905 339 aa15.91■□□□□ 0.14
CLN6-215ENST00000636674 HOXA10P31260 410 aaPredicted RBP15.91■□□□□ 0.14
CLN6-215ENST00000636674 ERVK-9P63128 1117 aa15.91■□□□□ 0.14
CLN6-215ENST00000636674 ARID5AQ03989 594 aa15.91■□□□□ 0.14
CLN6-215ENST00000636674 PICALMQ13492 652 aa15.91■□□□□ 0.14
CLN6-215ENST00000636674 GIT2Q14161 759 aa15.91■□□□□ 0.14
CLN6-215ENST00000636674 ICE2Q659A1 982 aa15.91■□□□□ 0.14
CLN6-215ENST00000636674 SYT2Q8N9I0 419 aaPredicted RBP15.91■□□□□ 0.14
CLN6-215ENST00000636674 ETNPPLQ8TBG4 499 aa15.91■□□□□ 0.14
CLN6-215ENST00000636674 MTFR1LQ9H019 292 aa15.91■□□□□ 0.14
CLN6-215ENST00000636674 KANSL2Q9H9L4 492 aa15.91■□□□□ 0.14
CLN6-215ENST00000636674 METTL14Q9HCE5 456 aaKnown RBP15.91■□□□□ 0.14
CLN6-215ENST00000636674 SIPA1L1O43166 1804 aa15.91■□□□□ 0.14
CLN6-215ENST00000636674 GTPBP10A4D1E9 387 aaKnown RBP15.9■□□□□ 0.14
CLN6-215ENST00000636674 KCNK3O14649 394 aa15.9■□□□□ 0.14
CLN6-215ENST00000636674 CALUO43852 315 aaPredicted RBP15.9■□□□□ 0.14
CLN6-215ENST00000636674 PPP1R37O75864 691 aa15.9■□□□□ 0.14
CLN6-215ENST00000636674 KRT18P05783 430 aaKnown RBP15.9■□□□□ 0.14
CLN6-215ENST00000636674 PON1P27169 355 aa15.9■□□□□ 0.14
CLN6-215ENST00000636674 GUCY2FP51841 1108 aa15.9■□□□□ 0.14
CLN6-215ENST00000636674 CASP5P51878 434 aa15.9■□□□□ 0.14
CLN6-215ENST00000636674 NPEPPSP55786 919 aa15.9■□□□□ 0.14
CLN6-215ENST00000636674 JAM2P57087 298 aa15.9■□□□□ 0.14
CLN6-215ENST00000636674 CACNB1Q02641 598 aaPredicted RBP15.9■□□□□ 0.14
CLN6-215ENST00000636674 ITGB3BPQ13352 177 aaPredicted RBP15.9■□□□□ 0.14
CLN6-215ENST00000636674 EPHA7Q15375 998 aa15.9■□□□□ 0.14
CLN6-215ENST00000636674 EXOC3L4Q17RC7 722 aa15.9■□□□□ 0.14
CLN6-215ENST00000636674 KCTD16Q68DU8 428 aa15.9■□□□□ 0.14
CLN6-215ENST00000636674 YTHDF3Q7Z739 585 aaKnown RBP15.9■□□□□ 0.14
CLN6-215ENST00000636674 RASGEF1CQ8N431 466 aa15.9■□□□□ 0.14
CLN6-215ENST00000636674 SLC16A10Q8TF71 515 aa15.9■□□□□ 0.14
CLN6-215ENST00000636674 SPAG5Q96R06 1193 aa15.9■□□□□ 0.14
CLN6-215ENST00000636674 TMBIM4Q9HC24 238 aa15.9■□□□□ 0.14
CLN6-215ENST00000636674 GGA2Q9UJY4 613 aa15.9■□□□□ 0.14
CLN6-215ENST00000636674 POTEFA5A3E0 1075 aa15.9■□□□□ 0.14
CLN6-215ENST00000636674 PGRMC1O00264 195 aaKnown RBP15.9■□□□□ 0.14
CLN6-215ENST00000636674 GFPT2O94808 682 aa15.9■□□□□ 0.14
CLN6-215ENST00000636674 ZBTB7AO95365 584 aa15.9■□□□□ 0.14
CLN6-215ENST00000636674 POTEIP0CG38 1075 aa15.9■□□□□ 0.14
CLN6-215ENST00000636674 XRCC5P13010 732 aaKnown RBP15.9■□□□□ 0.14
CLN6-215ENST00000636674 SLC9A1P19634 815 aa15.9■□□□□ 0.14
CLN6-215ENST00000636674 RPA1P27694 616 aa15.9■□□□□ 0.14
CLN6-215ENST00000636674 HOXD13P35453 343 aa15.9■□□□□ 0.14
CLN6-215ENST00000636674 SLC16A2P36021 539 aa15.9■□□□□ 0.14
CLN6-215ENST00000636674 DNA2P51530 1060 aa15.9■□□□□ 0.14
CLN6-215ENST00000636674 QRICH1Q2TAL8 776 aa15.9■□□□□ 0.14
CLN6-215ENST00000636674 Q4G0T1 1027 aa15.9■□□□□ 0.14
CLN6-215ENST00000636674 ALKBH5Q6P6C2 394 aaKnown RBP15.9■□□□□ 0.14
CLN6-215ENST00000636674 POTEGQ6S5H5 508 aa15.9■□□□□ 0.14
CLN6-215ENST00000636674 POTEEQ6S8J3 1075 aa15.9■□□□□ 0.14
CLN6-215ENST00000636674 MICALL1Q8N3F8 863 aa15.9■□□□□ 0.14
CLN6-215ENST00000636674 KCTD17Q8N5Z5 321 aa15.9■□□□□ 0.14
CLN6-215ENST00000636674 FLAD1Q8NFF5 587 aa15.9■□□□□ 0.14
CLN6-215ENST00000636674 TPCN2Q8NHX9 752 aa15.9■□□□□ 0.14
CLN6-215ENST00000636674 ERMNQ8TAM6 284 aa15.9■□□□□ 0.14
CLN6-215ENST00000636674 LRRC45Q96CN5 670 aa15.9■□□□□ 0.14
CLN6-215ENST00000636674 CCDC17Q96LX7 622 aa15.9■□□□□ 0.14
CLN6-215ENST00000636674 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.9■□□□□ 0.14
CLN6-215ENST00000636674 TYW1Q9NV66 732 aaKnown RBP15.9■□□□□ 0.14
CLN6-215ENST00000636674 PLAAQ9Y263 795 aa15.9■□□□□ 0.14
CLN6-215ENST00000636674 STXBP5LQ9Y2K9 1186 aa15.9■□□□□ 0.14
CLN6-215ENST00000636674 ADAMTSL1Q8N6G6 1762 aa15.9■□□□□ 0.14
CLN6-215ENST00000636674 ACTN1P12814 892 aa15.89■□□□□ 0.13
CLN6-215ENST00000636674 MDH1P40925 334 aaKnown RBP15.89■□□□□ 0.13
CLN6-215ENST00000636674 PTGISQ16647 500 aa15.89■□□□□ 0.13
CLN6-215ENST00000636674 TTC19Q6DKK2 380 aaPredicted RBP15.89■□□□□ 0.13
CLN6-215ENST00000636674 MMS22LQ6ZRQ5 1243 aa15.89■□□□□ 0.13
CLN6-215ENST00000636674 KCTD1Q719H9 257 aa15.89■□□□□ 0.13
CLN6-215ENST00000636674 CATSPER3Q86XQ3 398 aa15.89■□□□□ 0.13
CLN6-215ENST00000636674 ARFGAP2Q8N6H7 521 aa15.89■□□□□ 0.13
CLN6-215ENST00000636674 RBM46Q8TBY0 533 aaKnown RBP15.89■□□□□ 0.13
CLN6-215ENST00000636674 DCAF4Q8WV16 495 aa15.89■□□□□ 0.13
CLN6-215ENST00000636674 CRAMP1Q96RY5 1269 aa15.89■□□□□ 0.13
CLN6-215ENST00000636674 SLITRK6Q9H5Y7 841 aa15.89■□□□□ 0.13
CLN6-215ENST00000636674 SIX2Q9NPC8 291 aa15.89■□□□□ 0.13
CLN6-215ENST00000636674 SUCLA2Q9P2R7 463 aaPredicted RBP15.89■□□□□ 0.13
CLN6-215ENST00000636674 USP17L15C9J2P7 530 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms