RNA–Protein interactions for RNA: ENST00000636306.1

CHD2-223, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 1,755 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-223ENST00000636306 PFKFB3Q16875 520 aaPredicted RBP11.73□□□□□ -0.53
CHD2-223ENST00000636306 PABPC1LQ4VXU2 614 aaKnown RBP11.73□□□□□ -0.53
CHD2-223ENST00000636306 FAM47AQ5JRC9 791 aa11.73□□□□□ -0.53
CHD2-223ENST00000636306 ERMARDQ5T6L9 678 aa11.73□□□□□ -0.53
CHD2-223ENST00000636306 C16orf86Q6ZW13 317 aa11.73□□□□□ -0.53
CHD2-223ENST00000636306 ARHGAP18Q8N392 663 aa11.73□□□□□ -0.53
CHD2-223ENST00000636306 TGFBRAP1Q8WUH2 860 aa11.73□□□□□ -0.53
CHD2-223ENST00000636306 GSDMAQ96QA5 445 aa11.73□□□□□ -0.53
CHD2-223ENST00000636306 XPO6Q96QU8 1125 aaKnown RBP11.73□□□□□ -0.53
CHD2-223ENST00000636306 VPS54Q9P1Q0 977 aa11.73□□□□□ -0.53
CHD2-223ENST00000636306 FBXO2Q9UK22 296 aaPredicted RBP11.73□□□□□ -0.53
CHD2-223ENST00000636306 JAG2Q9Y219 1238 aa11.73□□□□□ -0.53
CHD2-223ENST00000636306 SLC4A7Q9Y6M7 1214 aa11.73□□□□□ -0.53
CHD2-223ENST00000636306 V9GY48 417 aaPredicted RBP11.73□□□□□ -0.53
CHD2-223ENST00000636306 GRID2IPA4D2P6 1211 aa11.72□□□□□ -0.53
CHD2-223ENST00000636306 PPP1R3GB7ZBB8 358 aa11.72□□□□□ -0.53
CHD2-223ENST00000636306 H0YGN5 161 aa11.72□□□□□ -0.53
CHD2-223ENST00000636306 CARSP49589 748 aaKnown RBP11.72□□□□□ -0.53
CHD2-223ENST00000636306 ALDH5A1P51649 535 aaPredicted RBP11.72□□□□□ -0.53
CHD2-223ENST00000636306 NLRP5P59047 1200 aa11.72□□□□□ -0.53
CHD2-223ENST00000636306 MYBPC3Q14896 1274 aa11.72□□□□□ -0.53
CHD2-223ENST00000636306 PKN1Q16512 942 aa11.72□□□□□ -0.53
CHD2-223ENST00000636306 ZNF827Q17R98 1081 aa11.72□□□□□ -0.53
CHD2-223ENST00000636306 TRPM8Q7Z2W7 1104 aa11.72□□□□□ -0.53
CHD2-223ENST00000636306 MYO3BQ8WXR4 1341 aa11.72□□□□□ -0.53
CHD2-223ENST00000636306 KIFAP3Q92845 792 aa11.72□□□□□ -0.53
CHD2-223ENST00000636306 PPP1R14BQ96C90 147 aa11.72□□□□□ -0.53
CHD2-223ENST00000636306 PLIN4Q96Q06 1357 aa11.72□□□□□ -0.53
CHD2-223ENST00000636306 FAM167BQ9BTA0 163 aa11.72□□□□□ -0.53
CHD2-223ENST00000636306 ZC3H12CQ9C0D7 883 aaKnown RBP11.72□□□□□ -0.53
CHD2-223ENST00000636306 FAM192AQ9GZU8 254 aa11.72□□□□□ -0.53
CHD2-223ENST00000636306 RAB17Q9H0T7 212 aa11.72□□□□□ -0.53
CHD2-223ENST00000636306 VCX3BQ9H321 246 aa11.72□□□□□ -0.53
CHD2-223ENST00000636306 VCX3AQ9NNX9 186 aa11.72□□□□□ -0.53
CHD2-223ENST00000636306 PCMTD2Q9NV79 361 aa11.72□□□□□ -0.53
CHD2-223ENST00000636306 NFU1Q9UMS0 254 aa11.72□□□□□ -0.53
CHD2-223ENST00000636306 NFS1Q9Y697 457 aa11.72□□□□□ -0.53
CHD2-223ENST00000636306 FLT1P17948 1338 aa11.72□□□□□ -0.53
CHD2-223ENST00000636306 G3V3G9 751 aa11.72□□□□□ -0.53
CHD2-223ENST00000636306 POLR2DO15514 142 aaKnown RBP11.72□□□□□ -0.53
CHD2-223ENST00000636306 FAM153BP0C7A2 387 aa11.72□□□□□ -0.53
CHD2-223ENST00000636306 ACADSP16219 412 aa11.72□□□□□ -0.53
CHD2-223ENST00000636306 NCALDP61601 193 aa11.72□□□□□ -0.53
CHD2-223ENST00000636306 USP4Q13107 963 aa11.72□□□□□ -0.53
CHD2-223ENST00000636306 TMED1Q13445 227 aa11.72□□□□□ -0.53
CHD2-223ENST00000636306 ZRSR2Q15696 482 aaKnown RBP11.72□□□□□ -0.53
CHD2-223ENST00000636306 FAM153CQ494X1 144 aa11.72□□□□□ -0.53
CHD2-223ENST00000636306 CFAP221Q4G0U5 840 aa11.72□□□□□ -0.53
CHD2-223ENST00000636306 DCAF8Q5TAQ9 597 aa11.72□□□□□ -0.53
CHD2-223ENST00000636306 ERICH1Q86X53 443 aa11.72□□□□□ -0.53
CHD2-223ENST00000636306 MAPKAPK5Q8IW41 473 aa11.72□□□□□ -0.53
CHD2-223ENST00000636306 RETREG2Q8NC44 543 aa11.72□□□□□ -0.53
CHD2-223ENST00000636306 ZNF526Q8TF50 670 aaPredicted RBP11.72□□□□□ -0.53
CHD2-223ENST00000636306 AKT1S1Q96B36 256 aa11.72□□□□□ -0.53
CHD2-223ENST00000636306 OPTNQ96CV9 577 aa11.72□□□□□ -0.53
CHD2-223ENST00000636306 IQCDQ96DY2 449 aa11.72□□□□□ -0.53
CHD2-223ENST00000636306 MASTLQ96GX5 879 aa11.72□□□□□ -0.53
CHD2-223ENST00000636306 NSRP1Q9H0G5 558 aaKnown RBP11.72□□□□□ -0.53
CHD2-223ENST00000636306 CABP5Q9NP86 173 aa11.72□□□□□ -0.53
CHD2-223ENST00000636306 FAM153AQ9UHL3 310 aa11.72□□□□□ -0.53
CHD2-223ENST00000636306 RWDD2AQ9UIY3 292 aa11.72□□□□□ -0.53
CHD2-223ENST00000636306 G3BP2Q9UN86 482 aaKnown RBP11.72□□□□□ -0.53
CHD2-223ENST00000636306 SNED1Q8TER0 1413 aa11.71□□□□□ -0.53
CHD2-223ENST00000636306 SPDYE5A6NIY4 337 aa11.71□□□□□ -0.54
CHD2-223ENST00000636306 hCG_1984214I3L0E3 225 aa11.71□□□□□ -0.54
CHD2-223ENST00000636306 HIP1RO75146 1068 aa11.71□□□□□ -0.54
CHD2-223ENST00000636306 HEXIM1O94992 359 aaKnown RBP11.71□□□□□ -0.54
CHD2-223ENST00000636306 SRGNP10124 158 aa11.71□□□□□ -0.54
CHD2-223ENST00000636306 GNAZP19086 355 aa11.71□□□□□ -0.54
CHD2-223ENST00000636306 SMARCA1P28370 1054 aa11.71□□□□□ -0.54
CHD2-223ENST00000636306 CDC25CP30307 473 aa11.71□□□□□ -0.54
CHD2-223ENST00000636306 TOB1P50616 345 aaPredicted RBP11.71□□□□□ -0.54
CHD2-223ENST00000636306 KLC1Q07866 573 aa11.71□□□□□ -0.54
CHD2-223ENST00000636306 NR5A1Q13285 461 aa11.71□□□□□ -0.54
CHD2-223ENST00000636306 CUL1Q13616 776 aa11.71□□□□□ -0.54
CHD2-223ENST00000636306 GALNTL6Q49A17 601 aa11.71□□□□□ -0.54
CHD2-223ENST00000636306 SPDYCQ5MJ68 293 aa11.71□□□□□ -0.54
CHD2-223ENST00000636306 TTC38Q5R3I4 469 aa11.71□□□□□ -0.54
CHD2-223ENST00000636306 IRGCQ6NXR0 463 aa11.71□□□□□ -0.54
CHD2-223ENST00000636306 WDR59Q6PJI9 974 aa11.71□□□□□ -0.54
CHD2-223ENST00000636306 DPP8Q6V1X1 898 aaPredicted RBP11.71□□□□□ -0.54
CHD2-223ENST00000636306 SH3RF1Q7Z6J0 888 aa11.71□□□□□ -0.54
CHD2-223ENST00000636306 FAM114A1Q8IWE2 563 aa11.71□□□□□ -0.54
CHD2-223ENST00000636306 CMTR1Q8N1G2 835 aaKnown RBP11.71□□□□□ -0.54
CHD2-223ENST00000636306 SRBD1Q8N5C6 995 aaKnown RBP11.71□□□□□ -0.54
CHD2-223ENST00000636306 ZNF713Q8N859 430 aaPredicted RBP11.71□□□□□ -0.54
CHD2-223ENST00000636306 NEDD1Q8NHV4 660 aa11.71□□□□□ -0.54
CHD2-223ENST00000636306 FBF1Q8TES7 1133 aa11.71□□□□□ -0.54
CHD2-223ENST00000636306 TRIM7Q9C029 511 aa11.71□□□□□ -0.54
CHD2-223ENST00000636306 LACRTQ9GZZ8 138 aa11.71□□□□□ -0.54
CHD2-223ENST00000636306 CCDC134Q9H6E4 229 aa11.71□□□□□ -0.54
CHD2-223ENST00000636306 EPB41L5Q9HCM4 733 aa11.71□□□□□ -0.54
CHD2-223ENST00000636306 ARHGEF3Q9NR81 526 aa11.71□□□□□ -0.54
CHD2-223ENST00000636306 SAMD15Q9P1V8 674 aa11.71□□□□□ -0.54
CHD2-223ENST00000636306 POLLQ9UGP5 575 aa11.71□□□□□ -0.54
CHD2-223ENST00000636306 TTC26A0AVF1 554 aa11.7□□□□□ -0.54
CHD2-223ENST00000636306 PHF20L1A8MW92 1017 aa11.7□□□□□ -0.54
CHD2-223ENST00000636306 APBA3O96018 575 aa11.7□□□□□ -0.54
CHD2-223ENST00000636306 MYBP10242 640 aa11.7□□□□□ -0.54
CHD2-223ENST00000636306 CD44P16070 742 aaKnown RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms