RNA–Protein interactions for RNA: ENST00000635727.1

CACNA1A-215, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,536 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-215ENST00000635727 ERLEC1Q96DZ1 483 aa18.69■□□□□ 0.58
CACNA1A-215ENST00000635727 HEMGNQ9BXL5 484 aa18.69■□□□□ 0.58
CACNA1A-215ENST00000635727 CYP4F11Q9HBI6 524 aa18.69■□□□□ 0.58
CACNA1A-215ENST00000635727 STX18Q9P2W9 335 aaKnown RBP18.69■□□□□ 0.58
CACNA1A-215ENST00000635727 TCF3P15923 654 aa18.69■□□□□ 0.58
CACNA1A-215ENST00000635727 TRIM60Q495X7 471 aa18.69■□□□□ 0.58
CACNA1A-215ENST00000635727 THEM5Q8N1Q8 247 aa18.69■□□□□ 0.58
CACNA1A-215ENST00000635727 UPF3AQ9H1J1 476 aaKnown RBP18.68■□□□□ 0.58
CACNA1A-215ENST00000635727 CIITAP33076 1130 aa18.68■□□□□ 0.58
CACNA1A-215ENST00000635727 ARL13BQ3SXY8 428 aa18.68■□□□□ 0.58
CACNA1A-215ENST00000635727 PATL1Q86TB9 770 aaKnown RBP18.68■□□□□ 0.58
CACNA1A-215ENST00000635727 ZFP42Q96MM3 310 aa18.68■□□□□ 0.58
CACNA1A-215ENST00000635727 SELENONQ9NZV5 590 aa18.68■□□□□ 0.58
CACNA1A-215ENST00000635727 SUN2Q9UH99 717 aa18.68■□□□□ 0.58
CACNA1A-215ENST00000635727 PAMP19021 973 aa18.68■□□□□ 0.58
CACNA1A-215ENST00000635727 CCNYL1Q8N7R7 359 aa18.68■□□□□ 0.58
CACNA1A-215ENST00000635727 MRPL28Q13084 256 aaKnown RBP18.68■□□□□ 0.58
CACNA1A-215ENST00000635727 GCKRQ14397 625 aa18.68■□□□□ 0.58
CACNA1A-215ENST00000635727 ARMC2Q8NEN0 867 aa18.68■□□□□ 0.58
CACNA1A-215ENST00000635727 KIF14Q15058 1648 aa18.68■□□□□ 0.58
CACNA1A-215ENST00000635727 PSMC2P35998 433 aaKnown RBP18.68■□□□□ 0.58
CACNA1A-215ENST00000635727 ME3Q16798 604 aa18.68■□□□□ 0.58
CACNA1A-215ENST00000635727 NACC1Q96RE7 527 aa18.68■□□□□ 0.58
CACNA1A-215ENST00000635727 SIK2Q9H0K1 926 aa18.68■□□□□ 0.58
CACNA1A-215ENST00000635727 TADA3O75528 432 aa18.68■□□□□ 0.58
CACNA1A-215ENST00000635727 H2AFZP0C0S5 128 aa18.68■□□□□ 0.58
CACNA1A-215ENST00000635727 CTTNQ14247 550 aaKnown RBP18.68■□□□□ 0.58
CACNA1A-215ENST00000635727 PDXDC2PQ6P474 469 aa18.68■□□□□ 0.58
CACNA1A-215ENST00000635727 H2AFVQ71UI9 128 aa18.68■□□□□ 0.58
CACNA1A-215ENST00000635727 SPON2Q9BUD6 331 aa18.68■□□□□ 0.58
CACNA1A-215ENST00000635727 ZNF229Q9UJW7 825 aa18.68■□□□□ 0.58
CACNA1A-215ENST00000635727 ZNF215Q9UL58 517 aaPredicted RBP18.68■□□□□ 0.58
CACNA1A-215ENST00000635727 RSPH10B2B2RC85 870 aa18.67■□□□□ 0.58
CACNA1A-215ENST00000635727 RSPH10BP0C881 870 aa18.67■□□□□ 0.58
CACNA1A-215ENST00000635727 SLC10A4Q96EP9 437 aa18.67■□□□□ 0.58
CACNA1A-215ENST00000635727 PNMA6EA0A0J9YXQ4 647 aa18.67■□□□□ 0.58
CACNA1A-215ENST00000635727 PSDA5PKW4 1024 aaPredicted RBP18.67■□□□□ 0.58
CACNA1A-215ENST00000635727 EPB42P16452 691 aa18.67■□□□□ 0.58
CACNA1A-215ENST00000635727 ANKRD40Q6AI12 368 aa18.67■□□□□ 0.58
CACNA1A-215ENST00000635727 KIAA2013Q8IYS2 634 aa18.67■□□□□ 0.58
CACNA1A-215ENST00000635727 SLC35F6Q8N357 371 aa18.67■□□□□ 0.58
CACNA1A-215ENST00000635727 RERGLQ9H628 205 aa18.67■□□□□ 0.58
CACNA1A-215ENST00000635727 CCNA1P78396 465 aa18.67■□□□□ 0.58
CACNA1A-215ENST00000635727 TWF2Q6IBS0 349 aaKnown RBP18.67■□□□□ 0.58
CACNA1A-215ENST00000635727 ARL8AQ96BM9 186 aa18.67■□□□□ 0.58
CACNA1A-215ENST00000635727 USE1Q9NZ43 259 aa18.67■□□□□ 0.58
CACNA1A-215ENST00000635727 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.67■□□□□ 0.58
CACNA1A-215ENST00000635727 HMGB1P1B2RPK0 211 aaPredicted RBP18.67■□□□□ 0.58
CACNA1A-215ENST00000635727 TMCC1O94876 653 aa18.67■□□□□ 0.58
CACNA1A-215ENST00000635727 SLC8A1P32418 973 aa18.67■□□□□ 0.58
CACNA1A-215ENST00000635727 ALFQ53S48 1182 aa18.67■□□□□ 0.58
CACNA1A-215ENST00000635727 DEPDC1Q5TB30 811 aa18.67■□□□□ 0.58
CACNA1A-215ENST00000635727 RUBCNLQ9H714 662 aa18.67■□□□□ 0.58
CACNA1A-215ENST00000635727 GTF2A1LQ9UNN4 478 aa18.67■□□□□ 0.58
CACNA1A-215ENST00000635727 HSPA1AP0DMV8 641 aaKnown RBP18.67■□□□□ 0.58
CACNA1A-215ENST00000635727 HSPA1BP0DMV9 641 aaKnown RBP18.67■□□□□ 0.58
CACNA1A-215ENST00000635727 TAC1P20366 129 aa18.67■□□□□ 0.58
CACNA1A-215ENST00000635727 IFNL3Q8IZI9 196 aa18.67■□□□□ 0.58
CACNA1A-215ENST00000635727 PRR23D1E9PI22 279 aaPredicted RBP18.67■□□□□ 0.58
CACNA1A-215ENST00000635727 ECEL1O95672 775 aa18.67■□□□□ 0.58
CACNA1A-215ENST00000635727 PRR23D2P0DMB1 279 aaPredicted RBP18.67■□□□□ 0.58
CACNA1A-215ENST00000635727 NNMTP40261 264 aa18.67■□□□□ 0.58
CACNA1A-215ENST00000635727 SLC16A1P53985 500 aa18.67■□□□□ 0.58
CACNA1A-215ENST00000635727 DYNLL1P63167 89 aaKnown RBP18.67■□□□□ 0.58
CACNA1A-215ENST00000635727 RBL2Q08999 1139 aa18.67■□□□□ 0.58
CACNA1A-215ENST00000635727 ARHGAP10A1A4S6 786 aa18.66■□□□□ 0.58
CACNA1A-215ENST00000635727 LMNAP02545 664 aaKnown RBP18.66■□□□□ 0.58
CACNA1A-215ENST00000635727 HMBSP08397 361 aa18.66■□□□□ 0.58
CACNA1A-215ENST00000635727 UBE2Q2Q8WVN8 375 aa18.66■□□□□ 0.58
CACNA1A-215ENST00000635727 SKIP12755 728 aa18.66■□□□□ 0.58
CACNA1A-215ENST00000635727 ATL3Q6DD88 541 aa18.66■□□□□ 0.58
CACNA1A-215ENST00000635727 NOSTRINQ8IVI9 506 aa18.66■□□□□ 0.58
CACNA1A-215ENST00000635727 DDX42Q86XP3 938 aaKnown RBP eCLIP18.66■□□□□ 0.58
CACNA1A-215ENST00000635727 THNSL1Q8IYQ7 743 aa18.66■□□□□ 0.58
CACNA1A-215ENST00000635727 LLPHQ9BRT6 129 aaKnown RBP18.66■□□□□ 0.58
CACNA1A-215ENST00000635727 DMAP1Q9NPF5 467 aaPredicted RBP18.66■□□□□ 0.58
CACNA1A-215ENST00000635727 PPARGC1AQ9UBK2 798 aaKnown RBP18.66■□□□□ 0.58
CACNA1A-215ENST00000635727 CTNND1O60716 968 aaKnown RBP18.66■□□□□ 0.58
CACNA1A-215ENST00000635727 CASP14P31944 242 aa18.66■□□□□ 0.58
CACNA1A-215ENST00000635727 PPARGP37231 505 aaPredicted RBP18.66■□□□□ 0.58
CACNA1A-215ENST00000635727 PAWRQ96IZ0 340 aaKnown RBP18.66■□□□□ 0.58
CACNA1A-215ENST00000635727 NIPSNAP3AQ9UFN0 247 aaPredicted RBP18.66■□□□□ 0.58
CACNA1A-215ENST00000635727 GUCA1CO95843 209 aa18.66■□□□□ 0.58
CACNA1A-215ENST00000635727 FSCBQ5H9T9 825 aa18.66■□□□□ 0.58
CACNA1A-215ENST00000635727 ACCSQ96QU6 501 aa18.66■□□□□ 0.58
CACNA1A-215ENST00000635727 PKN3Q6P5Z2 889 aa18.65■□□□□ 0.58
CACNA1A-215ENST00000635727 SNX21Q969T3 373 aa18.65■□□□□ 0.58
CACNA1A-215ENST00000635727 TPCN1Q9ULQ1 816 aa18.65■□□□□ 0.58
CACNA1A-215ENST00000635727 C8orf34Q49A92 452 aa18.65■□□□□ 0.58
CACNA1A-215ENST00000635727 KRT26Q7Z3Y9 468 aa18.65■□□□□ 0.58
CACNA1A-215ENST00000635727 ANKRD65E5RJM6 399 aa18.65■□□□□ 0.58
CACNA1A-215ENST00000635727 TMPRSS15P98073 1019 aa18.65■□□□□ 0.58
CACNA1A-215ENST00000635727 KHDRBS2Q5VWX1 349 aaKnown RBP18.65■□□□□ 0.58
CACNA1A-215ENST00000635727 NUP93Q8N1F7 819 aa18.65■□□□□ 0.58
CACNA1A-215ENST00000635727 FLCNQ8NFG4 579 aa18.65■□□□□ 0.58
CACNA1A-215ENST00000635727 CNKSR1Q969H4 720 aa18.65■□□□□ 0.58
CACNA1A-215ENST00000635727 SERPINI1Q99574 410 aa18.65■□□□□ 0.58
CACNA1A-215ENST00000635727 NPATQ14207 1427 aa18.65■□□□□ 0.58
CACNA1A-215ENST00000635727 YTHDC2Q9H6S0 1430 aaKnown RBP18.65■□□□□ 0.58
CACNA1A-215ENST00000635727 EIF2AK2P19525 551 aaKnown RBP18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms