RNA–Protein interactions for RNA: ENST00000635193.1

COL11A1-211, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL11A1, Length 5,289 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-211ENST00000635193 PPARGC1AQ9UBK2 798 aaKnown RBP12.54□□□□□ -0.4
COL11A1-211ENST00000635193 TTC26A0AVF1 554 aa12.54□□□□□ -0.4
COL11A1-211ENST00000635193 GRID2IPA4D2P6 1211 aa12.54□□□□□ -0.4
COL11A1-211ENST00000635193 CAPN9O14815 690 aa12.54□□□□□ -0.4
COL11A1-211ENST00000635193 EIF3HO15372 352 aaKnown RBP eCLIP12.54□□□□□ -0.4
COL11A1-211ENST00000635193 HAUS5O94927 633 aa12.54□□□□□ -0.4
COL11A1-211ENST00000635193 POLD1P28340 1107 aa12.54□□□□□ -0.4
COL11A1-211ENST00000635193 CORO7P57737 925 aa12.54□□□□□ -0.4
COL11A1-211ENST00000635193 MDM2Q00987 491 aaPredicted RBP12.54□□□□□ -0.4
COL11A1-211ENST00000635193 ZNF577Q9BSK1 485 aa12.54□□□□□ -0.4
COL11A1-211ENST00000635193 EPN3Q9H201 632 aa12.54□□□□□ -0.4
COL11A1-211ENST00000635193 TRPC5Q9UL62 973 aaPredicted RBP12.54□□□□□ -0.4
COL11A1-211ENST00000635193 UGGT1Q9NYU2 1555 aa12.54□□□□□ -0.4
COL11A1-211ENST00000635193 CYP2D7A0A087X1C5 515 aa12.54□□□□□ -0.4
COL11A1-211ENST00000635193 CTIFO43310 598 aaKnown RBP12.54□□□□□ -0.4
COL11A1-211ENST00000635193 TTLL1O95922 423 aa12.54□□□□□ -0.4
COL11A1-211ENST00000635193 RAPH1Q70E73 1250 aa12.54□□□□□ -0.4
COL11A1-211ENST00000635193 TBC1D10CQ8IV04 446 aa12.54□□□□□ -0.4
COL11A1-211ENST00000635193 VIPAS39Q9H9C1 493 aa12.54□□□□□ -0.4
COL11A1-211ENST00000635193 CHD1O14646 1710 aa12.54□□□□□ -0.4
COL11A1-211ENST00000635193 POLGP54098 1239 aaPredicted RBP12.54□□□□□ -0.4
COL11A1-211ENST00000635193 MTF1Q14872 753 aa12.54□□□□□ -0.4
COL11A1-211ENST00000635193 IQCB1Q15051 598 aa12.54□□□□□ -0.4
COL11A1-211ENST00000635193 KCTD1Q719H9 257 aa12.54□□□□□ -0.4
COL11A1-211ENST00000635193 CENPUQ71F23 418 aa12.54□□□□□ -0.4
COL11A1-211ENST00000635193 NACC1Q96RE7 527 aa12.54□□□□□ -0.4
COL11A1-211ENST00000635193 STRBPQ96SI9 672 aaKnown RBP12.54□□□□□ -0.4
COL11A1-211ENST00000635193 UPF3AQ9H1J1 476 aaKnown RBP12.54□□□□□ -0.4
COL11A1-211ENST00000635193 SH3GLB2Q9NR46 395 aa12.54□□□□□ -0.4
COL11A1-211ENST00000635193 WDR19Q8NEZ3 1342 aa12.54□□□□□ -0.4
COL11A1-211ENST00000635193 SYNGAP1Q96PV0 1343 aa12.54□□□□□ -0.4
COL11A1-211ENST00000635193 MXI1P50539 228 aa12.53□□□□□ -0.4
COL11A1-211ENST00000635193 SCNN1DP51172 638 aa12.53□□□□□ -0.4
COL11A1-211ENST00000635193 TRMT10CQ7L0Y3 403 aaKnown RBP12.53□□□□□ -0.4
COL11A1-211ENST00000635193 ZNF473Q8WTR7 871 aaKnown RBP12.53□□□□□ -0.4
COL11A1-211ENST00000635193 DPF2Q92785 391 aa12.53□□□□□ -0.4
COL11A1-211ENST00000635193 CCDC124Q96CT7 223 aaKnown RBP12.53□□□□□ -0.4
COL11A1-211ENST00000635193 KRT82Q9NSB4 513 aa12.53□□□□□ -0.4
COL11A1-211ENST00000635193 SORBS3O60504 671 aa12.53□□□□□ -0.4
COL11A1-211ENST00000635193 PMS2P54278 862 aa12.53□□□□□ -0.4
COL11A1-211ENST00000635193 BCORL1Q5H9F3 1711 aa12.53□□□□□ -0.4
COL11A1-211ENST00000635193 SHC4Q6S5L8 630 aa12.53□□□□□ -0.4
COL11A1-211ENST00000635193 RGS9BPQ6ZS82 235 aa12.53□□□□□ -0.4
COL11A1-211ENST00000635193 CYB5R4Q7L1T6 521 aa12.53□□□□□ -0.4
COL11A1-211ENST00000635193 METTL13Q8N6R0 699 aa12.53□□□□□ -0.4
COL11A1-211ENST00000635193 CEP19Q96LK0 163 aa12.53□□□□□ -0.4
COL11A1-211ENST00000635193 TAF1DQ9H5J8 278 aaPredicted RBP12.53□□□□□ -0.4
COL11A1-211ENST00000635193 PARVGQ9HBI0 331 aa12.53□□□□□ -0.4
COL11A1-211ENST00000635193 SPC25Q9HBM1 224 aa12.53□□□□□ -0.4
COL11A1-211ENST00000635193 USP6P35125 1406 aa12.53□□□□□ -0.4
COL11A1-211ENST00000635193 IQANK1A0A1B0GTG1 560 aa12.53□□□□□ -0.4
COL11A1-211ENST00000635193 DLGAP5Q15398 846 aa12.53□□□□□ -0.4
COL11A1-211ENST00000635193 BBS9Q3SYG4 887 aa12.53□□□□□ -0.4
COL11A1-211ENST00000635193 USP17L2Q6R6M4 530 aa12.53□□□□□ -0.4
COL11A1-211ENST00000635193 TTLL11Q8NHH1 800 aa12.53□□□□□ -0.4
COL11A1-211ENST00000635193 NEDD4P46934 1319 aa12.53□□□□□ -0.4
COL11A1-211ENST00000635193 ESYT2A0FGR8 921 aa12.53□□□□□ -0.4
COL11A1-211ENST00000635193 HNRNPH1P31943 449 aaKnown RBP12.53□□□□□ -0.4
COL11A1-211ENST00000635193 DNAJC24Q6P3W2 148 aa12.53□□□□□ -0.4
COL11A1-211ENST00000635193 RNF207Q6ZRF8 634 aa12.53□□□□□ -0.4
COL11A1-211ENST00000635193 ANO5Q75V66 913 aa12.53□□□□□ -0.4
COL11A1-211ENST00000635193 MB21D2Q8IYB1 491 aaPredicted RBP12.53□□□□□ -0.4
COL11A1-211ENST00000635193 OXER1Q8TDS5 423 aa12.53□□□□□ -0.4
COL11A1-211ENST00000635193 PYROXD1Q8WU10 500 aa12.53□□□□□ -0.4
COL11A1-211ENST00000635193 SEC31BQ9NQW1 1179 aa12.53□□□□□ -0.4
COL11A1-211ENST00000635193 PLEKHG1Q9ULL1 1385 aa12.53□□□□□ -0.4
COL11A1-211ENST00000635193 MIF4GDA9UHW6 222 aaKnown RBP12.53□□□□□ -0.4
COL11A1-211ENST00000635193 SLC16A2P36021 539 aa12.53□□□□□ -0.4
COL11A1-211ENST00000635193 KLC1Q07866 573 aa12.53□□□□□ -0.4
COL11A1-211ENST00000635193 SESTD1Q86VW0 696 aa12.53□□□□□ -0.4
COL11A1-211ENST00000635193 WDR11Q9BZH6 1224 aa12.53□□□□□ -0.4
COL11A1-211ENST00000635193 RASA4BC9J798 803 aa12.52□□□□□ -0.4
COL11A1-211ENST00000635193 GOLGA8SH3BPF8 625 aa12.52□□□□□ -0.4
COL11A1-211ENST00000635193 RASA4O43374 803 aa12.52□□□□□ -0.4
COL11A1-211ENST00000635193 CASP2P42575 452 aa12.52□□□□□ -0.4
COL11A1-211ENST00000635193 UBXN2AP68543 259 aa12.52□□□□□ -0.4
COL11A1-211ENST00000635193 TBC1D10BQ4KMP7 808 aaPredicted RBP12.52□□□□□ -0.4
COL11A1-211ENST00000635193 DARS2Q6PI48 645 aaKnown RBP12.52□□□□□ -0.4
COL11A1-211ENST00000635193 CRLF3Q8IUI8 442 aa12.52□□□□□ -0.4
COL11A1-211ENST00000635193 TEX9Q8N6V9 391 aa12.52□□□□□ -0.4
COL11A1-211ENST00000635193 TTC1Q99614 292 aa12.52□□□□□ -0.4
COL11A1-211ENST00000635193 MED10Q9BTT4 135 aa12.52□□□□□ -0.4
COL11A1-211ENST00000635193 IPO5O00410 1097 aaKnown RBP12.52□□□□□ -0.41
COL11A1-211ENST00000635193 FOXN1O15353 648 aa12.52□□□□□ -0.41
COL11A1-211ENST00000635193 ACTN1P12814 892 aa12.52□□□□□ -0.41
COL11A1-211ENST00000635193 MCAMP43121 646 aa12.52□□□□□ -0.41
COL11A1-211ENST00000635193 CCDC17Q96LX7 622 aa12.52□□□□□ -0.41
COL11A1-211ENST00000635193 ZNF277Q9NRM2 450 aaPredicted RBP12.52□□□□□ -0.41
COL11A1-211ENST00000635193 WARS2Q9UGM6 360 aaKnown RBP12.52□□□□□ -0.41
COL11A1-211ENST00000635193 RFX7Q2KHR2 1363 aa12.52□□□□□ -0.41
COL11A1-211ENST00000635193 MDH1P40925 334 aaKnown RBP12.52□□□□□ -0.41
COL11A1-211ENST00000635193 NEK2P51955 445 aa12.52□□□□□ -0.41
COL11A1-211ENST00000635193 RASGRF1Q13972 1273 aa12.52□□□□□ -0.41
COL11A1-211ENST00000635193 CDC37Q16543 378 aaPredicted RBP12.52□□□□□ -0.41
COL11A1-211ENST00000635193 UBE2SQ16763 222 aa12.52□□□□□ -0.41
COL11A1-211ENST00000635193 ABCB5Q2M3G0 1257 aa12.52□□□□□ -0.41
COL11A1-211ENST00000635193 PROM2Q8N271 834 aa12.52□□□□□ -0.41
COL11A1-211ENST00000635193 FAM161BQ96MY7 647 aa12.52□□□□□ -0.41
COL11A1-211ENST00000635193 SUGCTQ9HAC7 445 aa12.52□□□□□ -0.41
COL11A1-211ENST00000635193 KMT5AQ9NQR1 393 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms