RNA–Protein interactions for RNA: ENST00000628904.2

PKP4-217, Transcript of plakophilin 4, humanhuman

TSL 5 BASIC

Gene PKP4, Length 3,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-217ENST00000628904 KCTD16Q68DU8 428 aa8.23□□□□□ -1.09
PKP4-217ENST00000628904 SND1Q7KZF4 910 aaKnown RBP eCLIP8.23□□□□□ -1.099e-9■□□□□ 8.6
PKP4-217ENST00000628904 DAAM2Q86T65 1068 aa8.23□□□□□ -1.09
PKP4-217ENST00000628904 SULF1Q8IWU6 871 aa8.23□□□□□ -1.09
PKP4-217ENST00000628904 PRPF38AQ8NAV1 312 aaKnown RBP8.23□□□□□ -1.09
PKP4-217ENST00000628904 POMGNT1Q8WZA1 660 aa8.23□□□□□ -1.09
PKP4-217ENST00000628904 MRRFQ96E11 262 aaKnown RBP8.23□□□□□ -1.09
PKP4-217ENST00000628904 MTMR9Q96QG7 549 aa8.23□□□□□ -1.09
PKP4-217ENST00000628904 C7orf25Q9BPX7 421 aa8.23□□□□□ -1.09
PKP4-217ENST00000628904 UNC45AQ9H3U1 944 aa8.23□□□□□ -1.09
PKP4-217ENST00000628904 ELP3Q9H9T3 547 aa8.23□□□□□ -1.09
PKP4-217ENST00000628904 ABCB6Q9NP58 842 aa8.23□□□□□ -1.09
PKP4-217ENST00000628904 RNF19AQ9NV58 838 aa8.23□□□□□ -1.09
PKP4-217ENST00000628904 GABBR1Q9UBS5 961 aa8.23□□□□□ -1.09
PKP4-217ENST00000628904 USTQ9Y2C2 406 aa8.23□□□□□ -1.09
PKP4-217ENST00000628904 FHOD1Q9Y613 1164 aa8.23□□□□□ -1.09
PKP4-217ENST00000628904 CAPN6Q9Y6Q1 641 aa8.23□□□□□ -1.09
PKP4-217ENST00000628904 ABCC6O95255 1503 aa8.23□□□□□ -1.09
PKP4-217ENST00000628904 TJP1Q07157 1748 aa8.22□□□□□ -1.09
PKP4-217ENST00000628904 CALUO43852 315 aaPredicted RBP8.22□□□□□ -1.09
PKP4-217ENST00000628904 PRPHP41219 470 aa8.22□□□□□ -1.09
PKP4-217ENST00000628904 ZNF211Q13398 564 aaPredicted RBP8.22□□□□□ -1.09
PKP4-217ENST00000628904 MAATS1Q7Z4T9 603 aa8.22□□□□□ -1.09
PKP4-217ENST00000628904 CCDC25Q86WR0 208 aa8.22□□□□□ -1.09
PKP4-217ENST00000628904 GLYCTKQ8IVS8 523 aa8.22□□□□□ -1.09
PKP4-217ENST00000628904 CEP112Q8N8E3 955 aa8.22□□□□□ -1.09
PKP4-217ENST00000628904 TMEM143Q96AN5 459 aa8.22□□□□□ -1.09
PKP4-217ENST00000628904 PI4K2AQ9BTU6 479 aa8.22□□□□□ -1.09
PKP4-217ENST00000628904 WDR18Q9BV38 432 aa8.22□□□□□ -1.09
PKP4-217ENST00000628904 UBE2TQ9NPD8 197 aaPredicted RBP8.22□□□□□ -1.09
PKP4-217ENST00000628904 PLCB1Q9NQ66 1216 aa8.22□□□□□ -1.09
PKP4-217ENST00000628904 RIPK3Q9Y572 518 aa8.22□□□□□ -1.09
PKP4-217ENST00000628904 GLI3P10071 1580 aa8.22□□□□□ -1.09
PKP4-217ENST00000628904 SNED1Q8TER0 1413 aa8.22□□□□□ -1.09
PKP4-217ENST00000628904 TLDC2A0PJX2 215 aa8.22□□□□□ -1.09
PKP4-217ENST00000628904 AKAP3O75969 853 aa8.22□□□□□ -1.09
PKP4-217ENST00000628904 PGK2P07205 417 aa8.22□□□□□ -1.09
PKP4-217ENST00000628904 TNFAIP3P21580 790 aa8.22□□□□□ -1.09
PKP4-217ENST00000628904 KNOP1Q1ED39 458 aaKnown RBP8.22□□□□□ -1.09
PKP4-217ENST00000628904 COG1Q8WTW3 980 aa8.22□□□□□ -1.09
PKP4-217ENST00000628904 DPH5Q9H2P9 285 aa8.22□□□□□ -1.09
PKP4-217ENST00000628904 NOP56O00567 594 aaKnown RBP8.22□□□□□ -1.09
PKP4-217ENST00000628904 ATMINO43313 823 aaPredicted RBP8.22□□□□□ -1.09
PKP4-217ENST00000628904 ONECUT3O60422 494 aaPredicted RBP8.22□□□□□ -1.09
PKP4-217ENST00000628904 ATP9AO75110 1047 aa8.22□□□□□ -1.09
PKP4-217ENST00000628904 KRT19P08727 400 aa8.22□□□□□ -1.09
PKP4-217ENST00000628904 TAX1BP1Q86VP1 789 aa8.22□□□□□ -1.09
PKP4-217ENST00000628904 CCDC50Q8IVM0 306 aa8.22□□□□□ -1.09
PKP4-217ENST00000628904 GUF1Q8N442 669 aaKnown RBP8.22□□□□□ -1.09
PKP4-217ENST00000628904 ANKS1AQ92625 1134 aa8.22□□□□□ -1.09
PKP4-217ENST00000628904 ZBTB10Q96DT7 871 aa8.22□□□□□ -1.09
PKP4-217ENST00000628904 GBP3Q9H0R5 595 aa8.22□□□□□ -1.09
PKP4-217ENST00000628904 CUEDC2Q9H467 287 aa8.22□□□□□ -1.09
PKP4-217ENST00000628904 CTTNBP2NLQ9P2B4 639 aa8.22□□□□□ -1.09
PKP4-217ENST00000628904 LARSQ9P2J5 1176 aaKnown RBP8.22□□□□□ -1.09
PKP4-217ENST00000628904 HERC5Q9UII4 1024 aaKnown RBP8.22□□□□□ -1.09
PKP4-217ENST00000628904 SUGT1Q9Y2Z0 365 aa8.22□□□□□ -1.09
PKP4-217ENST00000628904 PALMO75781 387 aa8.21□□□□□ -1.09
PKP4-217ENST00000628904 TRIM14Q14142 442 aa8.21□□□□□ -1.09
PKP4-217ENST00000628904 KCNB1Q14721 858 aa8.21□□□□□ -1.09
PKP4-217ENST00000628904 SRGAP1Q7Z6B7 1085 aa8.21□□□□□ -1.09
PKP4-217ENST00000628904 TMEM139Q8IV31 216 aa8.21□□□□□ -1.09
PKP4-217ENST00000628904 PASD1Q8IV76 773 aa8.21□□□□□ -1.09
PKP4-217ENST00000628904 BBXQ8WY36 941 aaPredicted RBP8.21□□□□□ -1.09
PKP4-217ENST00000628904 NOX5Q96PH1 765 aa8.21□□□□□ -1.09
PKP4-217ENST00000628904 KRT12Q99456 494 aa8.21□□□□□ -1.09
PKP4-217ENST00000628904 NUP58Q9BVL2 599 aa8.21□□□□□ -1.09
PKP4-217ENST00000628904 ARHGAP20Q9P2F6 1191 aa8.21□□□□□ -1.09
PKP4-217ENST00000628904 FAM237AA0A1B0GTK4 181 aa8.21□□□□□ -1.1
PKP4-217ENST00000628904 HGSO14964 777 aaPredicted RBP8.21□□□□□ -1.1
PKP4-217ENST00000628904 ZEB2O60315 1214 aa8.21□□□□□ -1.1
PKP4-217ENST00000628904 ENTPD3O75355 529 aa8.21□□□□□ -1.1
PKP4-217ENST00000628904 AFPP02771 609 aaKnown RBP8.21□□□□□ -1.1
PKP4-217ENST00000628904 VCAM1P19320 739 aa8.21□□□□□ -1.1
PKP4-217ENST00000628904 VSNL1P62760 191 aa8.21□□□□□ -1.1
PKP4-217ENST00000628904 CETN1Q12798 172 aa8.21□□□□□ -1.1
PKP4-217ENST00000628904 SMC1AQ14683 1233 aaKnown RBP8.21□□□□□ -1.1
PKP4-217ENST00000628904 LONRF2Q1L5Z9 754 aa8.21□□□□□ -1.1
PKP4-217ENST00000628904 FAM182AQ5T1J6 154 aa8.21□□□□□ -1.1
PKP4-217ENST00000628904 RINT1Q6NUQ1 792 aa8.21□□□□□ -1.1
PKP4-217ENST00000628904 DAGLBQ8NCG7 672 aa8.21□□□□□ -1.1
PKP4-217ENST00000628904 TRPM4Q8TD43 1214 aa8.21□□□□□ -1.1
PKP4-217ENST00000628904 CBWD1Q9BRT8 395 aa8.21□□□□□ -1.1
PKP4-217ENST00000628904 NAA15Q9BXJ9 866 aaKnown RBP8.21□□□□□ -1.1
PKP4-217ENST00000628904 CSADQ9Y600 493 aa8.21□□□□□ -1.1
PKP4-217ENST00000628904 A0A087X0T9 212 aa8.21□□□□□ -1.1
PKP4-217ENST00000628904 EFCAB8A8MWE9 144 aa8.21□□□□□ -1.1
PKP4-217ENST00000628904 ADM5C9JUS6 153 aa8.21□□□□□ -1.1
PKP4-217ENST00000628904 N4BP1O75113 896 aaKnown RBP8.21□□□□□ -1.1
PKP4-217ENST00000628904 FAM228BP0C875 321 aa8.21□□□□□ -1.1
PKP4-217ENST00000628904 HPDP32754 393 aaPredicted RBP8.21□□□□□ -1.1
PKP4-217ENST00000628904 STAT1P42224 750 aa8.21□□□□□ -1.1
PKP4-217ENST00000628904 ACOT2P49753 483 aa8.21□□□□□ -1.1
PKP4-217ENST00000628904 FXR2P51116 673 aaKnown RBP eCLIP8.21□□□□□ -1.17e-7■■■□□ 16
PKP4-217ENST00000628904 USP11P51784 963 aa8.21□□□□□ -1.1
PKP4-217ENST00000628904 PRELPP51888 382 aa8.21□□□□□ -1.1
PKP4-217ENST00000628904 CNTN2Q02246 1040 aa8.21□□□□□ -1.1
PKP4-217ENST00000628904 GIT2Q14161 759 aa8.21□□□□□ -1.1
PKP4-217ENST00000628904 PDIA5Q14554 519 aa8.21□□□□□ -1.1
PKP4-217ENST00000628904 GBP6Q6ZN66 633 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms