RNA–Protein interactions for RNA: ENST00000628857.1

CNOT1-223, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 5 BASIC

Gene CNOT1, Length 291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-223ENST00000628857 HOXA5P20719 270 aa4.42□□□□□ -1.7
CNOT1-223ENST00000628857 ZNF460Q14592 562 aa4.42□□□□□ -1.7
CNOT1-223ENST00000628857 SEC23AQ15436 765 aa4.42□□□□□ -1.7
CNOT1-223ENST00000628857 NT5DC1Q5TFE4 455 aa4.42□□□□□ -1.7
CNOT1-223ENST00000628857 BORAQ6PGQ7 559 aa4.42□□□□□ -1.7
CNOT1-223ENST00000628857 STK32CQ86UX6 486 aa4.42□□□□□ -1.7
CNOT1-223ENST00000628857 LGI4Q8N135 537 aa4.42□□□□□ -1.7
CNOT1-223ENST00000628857 CXorf38Q8TB03 319 aa4.42□□□□□ -1.7
CNOT1-223ENST00000628857 ZCCHC14Q8WYQ9 949 aaKnown RBP4.42□□□□□ -1.7
CNOT1-223ENST00000628857 MBD6Q96DN6 1003 aa4.42□□□□□ -1.7
CNOT1-223ENST00000628857 MTFR1LQ9H019 292 aa4.42□□□□□ -1.7
CNOT1-223ENST00000628857 BARX1Q9HBU1 254 aaPredicted RBP4.42□□□□□ -1.7
CNOT1-223ENST00000628857 INCENPQ9NQS7 918 aa4.42□□□□□ -1.7
CNOT1-223ENST00000628857 ADAM29Q9UKF5 820 aa4.42□□□□□ -1.7
CNOT1-223ENST00000628857 MAPRE3Q9UPY8 281 aa4.42□□□□□ -1.7
CNOT1-223ENST00000628857 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.41□□□□□ -1.7
CNOT1-223ENST00000628857 PTPDC1A2A3K4 754 aa4.41□□□□□ -1.7
CNOT1-223ENST00000628857 H0Y858 1186 aa4.41□□□□□ -1.7
CNOT1-223ENST00000628857 SCDO00767 359 aa4.41□□□□□ -1.7
CNOT1-223ENST00000628857 MPIG6BO95866 241 aa4.41□□□□□ -1.7
CNOT1-223ENST00000628857 POLD1P28340 1107 aa4.41□□□□□ -1.7
CNOT1-223ENST00000628857 ADCY1Q08828 1119 aa4.41□□□□□ -1.7
CNOT1-223ENST00000628857 EPHA7Q15375 998 aa4.41□□□□□ -1.7
CNOT1-223ENST00000628857 ZNF174Q15697 407 aa4.41□□□□□ -1.7
CNOT1-223ENST00000628857 PIK3R6Q5UE93 754 aa4.41□□□□□ -1.7
CNOT1-223ENST00000628857 ERICH6BQ5W0A0 696 aa4.41□□□□□ -1.7
CNOT1-223ENST00000628857 MCTP2Q6DN12 878 aa4.41□□□□□ -1.7
CNOT1-223ENST00000628857 SDE2Q6IQ49 451 aa4.41□□□□□ -1.7
CNOT1-223ENST00000628857 Q6ZUG5 572 aa4.41□□□□□ -1.7
CNOT1-223ENST00000628857 PLEKHH3Q7Z736 793 aa4.41□□□□□ -1.7
CNOT1-223ENST00000628857 ZZZ3Q8IYH5 903 aa4.41□□□□□ -1.7
CNOT1-223ENST00000628857 ADGRG2Q8IZP9 1017 aa4.41□□□□□ -1.7
CNOT1-223ENST00000628857 CALML6Q8TD86 181 aa4.41□□□□□ -1.7
CNOT1-223ENST00000628857 ASB15Q8WXK1 588 aa4.41□□□□□ -1.7
CNOT1-223ENST00000628857 GBP4Q96PP9 640 aa4.41□□□□□ -1.7
CNOT1-223ENST00000628857 MSL2Q9HCI7 577 aa4.41□□□□□ -1.7
CNOT1-223ENST00000628857 RBPJLQ9UBG7 517 aa4.41□□□□□ -1.7
CNOT1-223ENST00000628857 ZFP69BQ9UJL9 534 aa4.41□□□□□ -1.7
CNOT1-223ENST00000628857 CROTQ9UKG9 612 aa4.41□□□□□ -1.7
CNOT1-223ENST00000628857 ZKSCAN5Q9Y2L8 839 aa4.41□□□□□ -1.7
CNOT1-223ENST00000628857 SPO11Q9Y5K1 396 aa4.41□□□□□ -1.7
CNOT1-223ENST00000628857 A0A087X0B3 334 aa4.4□□□□□ -1.71
CNOT1-223ENST00000628857 PRAMEF25A6NGN4 478 aa4.4□□□□□ -1.71
CNOT1-223ENST00000628857 H7C1D1 291 aa4.4□□□□□ -1.71
CNOT1-223ENST00000628857 CYP1A1P04798 512 aaPredicted RBP4.4□□□□□ -1.71
CNOT1-223ENST00000628857 ECE1P42892 770 aa4.4□□□□□ -1.71
CNOT1-223ENST00000628857 GYS2P54840 703 aa4.4□□□□□ -1.71
CNOT1-223ENST00000628857 OCRLQ01968 901 aa4.4□□□□□ -1.71
CNOT1-223ENST00000628857 NFATC3Q12968 1075 aa4.4□□□□□ -1.71
CNOT1-223ENST00000628857 CATSPEREQ5SY80 951 aa4.4□□□□□ -1.71
CNOT1-223ENST00000628857 GPR158Q5T848 1215 aa4.4□□□□□ -1.71
CNOT1-223ENST00000628857 CPZQ66K79 652 aa4.4□□□□□ -1.71
CNOT1-223ENST00000628857 TRMT10BQ6PF06 316 aaKnown RBP4.4□□□□□ -1.71
CNOT1-223ENST00000628857 EFHBQ8N7U6 833 aa4.4□□□□□ -1.71
CNOT1-223ENST00000628857 STPG3Q8N7X2 389 aa4.4□□□□□ -1.71
CNOT1-223ENST00000628857 FEZF2Q8TBJ5 459 aa4.4□□□□□ -1.71
CNOT1-223ENST00000628857 FOXRED1Q96CU9 486 aaPredicted RBP4.4□□□□□ -1.71
CNOT1-223ENST00000628857 C16orf92Q96LL3 132 aa4.4□□□□□ -1.71
CNOT1-223ENST00000628857 C20orf173Q96LM9 149 aa4.4□□□□□ -1.71
CNOT1-223ENST00000628857 FOXB1Q99853 325 aa4.4□□□□□ -1.71
CNOT1-223ENST00000628857 AMNQ9BXJ7 453 aa4.4□□□□□ -1.71
CNOT1-223ENST00000628857 SLKQ9H2G2 1235 aaPredicted RBP4.4□□□□□ -1.71
CNOT1-223ENST00000628857 SLC39A2Q9NP94 309 aa4.4□□□□□ -1.71
CNOT1-223ENST00000628857 USP40Q9NVE5 1235 aa4.4□□□□□ -1.71
CNOT1-223ENST00000628857 IFT57Q9NWB7 429 aa4.4□□□□□ -1.71
CNOT1-223ENST00000628857 RASSF10A6NK89 507 aa4.39□□□□□ -1.71
CNOT1-223ENST00000628857 GSG1L2A8MUP6 293 aa4.39□□□□□ -1.71
CNOT1-223ENST00000628857 DVL2O14641 736 aa4.39□□□□□ -1.71
CNOT1-223ENST00000628857 GAS7O60861 476 aa4.39□□□□□ -1.71
CNOT1-223ENST00000628857 SCNN1BP51168 640 aa4.39□□□□□ -1.71
CNOT1-223ENST00000628857 NEK4P51957 841 aa4.39□□□□□ -1.71
CNOT1-223ENST00000628857 CTSWP56202 376 aa4.39□□□□□ -1.71
CNOT1-223ENST00000628857 ALDH6A1Q02252 535 aaKnown RBP4.39□□□□□ -1.71
CNOT1-223ENST00000628857 DSG1Q02413 1049 aa4.39□□□□□ -1.71
CNOT1-223ENST00000628857 TOP3AQ13472 1001 aaPredicted RBP4.39□□□□□ -1.71
CNOT1-223ENST00000628857 LRRC32Q14392 662 aa4.39□□□□□ -1.71
CNOT1-223ENST00000628857 NFIXQ14938 502 aa4.39□□□□□ -1.71
CNOT1-223ENST00000628857 EIF4HQ15056 248 aaKnown RBP4.39□□□□□ -1.71
CNOT1-223ENST00000628857 KANK2Q63ZY3 851 aa4.39□□□□□ -1.71
CNOT1-223ENST00000628857 RTN4RL1Q86UN2 441 aaPredicted RBP4.39□□□□□ -1.71
CNOT1-223ENST00000628857 PASD1Q8IV76 773 aa4.39□□□□□ -1.71
CNOT1-223ENST00000628857 SYT8Q8NBV8 401 aa4.39□□□□□ -1.71
CNOT1-223ENST00000628857 ZSWIM3Q96MP5 696 aa4.39□□□□□ -1.71
CNOT1-223ENST00000628857 CARD11Q9BXL7 1154 aa4.39□□□□□ -1.71
CNOT1-223ENST00000628857 ZDHHC5Q9C0B5 715 aa4.39□□□□□ -1.71
CNOT1-223ENST00000628857 OR10A5Q9H207 317 aa4.39□□□□□ -1.71
CNOT1-223ENST00000628857 PRKAB1Q9Y478 270 aa4.39□□□□□ -1.71
CNOT1-223ENST00000628857 CADPSQ9ULU8 1353 aa4.39□□□□□ -1.71
CNOT1-223ENST00000628857 A0A0G2JLL6 359 aaPredicted RBP4.38□□□□□ -1.71
CNOT1-223ENST00000628857 KCNK3O14649 394 aa4.38□□□□□ -1.71
CNOT1-223ENST00000628857 MAFGO15525 162 aa4.38□□□□□ -1.71
CNOT1-223ENST00000628857 MMEP08473 750 aa4.38□□□□□ -1.71
CNOT1-223ENST00000628857 APEX1P27695 318 aaKnown RBP4.38□□□□□ -1.71
CNOT1-223ENST00000628857 ETV4P43268 484 aa4.38□□□□□ -1.71
CNOT1-223ENST00000628857 GLRBP48167 497 aa4.38□□□□□ -1.71
CNOT1-223ENST00000628857 KIF11P52732 1056 aa4.38□□□□□ -1.71
CNOT1-223ENST00000628857 PHC1P78364 1004 aa4.38□□□□□ -1.71
CNOT1-223ENST00000628857 TMEM132BQ14DG7 1078 aa4.38□□□□□ -1.71
CNOT1-223ENST00000628857 DHCR24Q15392 516 aa4.38□□□□□ -1.71
CNOT1-223ENST00000628857 ZNF827Q17R98 1081 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms