RNA–Protein interactions for RNA: ENST00000628347.1

SOX2-OT-247, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 445 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-247ENST00000628347 LINC00271P0C7V0 271 aa14.19□□□□□ -0.14
SOX2-OT-247ENST00000628347 ZNF76P36508 570 aa14.19□□□□□ -0.14
SOX2-OT-247ENST00000628347 FGD1P98174 961 aa14.19□□□□□ -0.14
SOX2-OT-247ENST00000628347 APOBRQ0VD83 1088 aa14.19□□□□□ -0.14
SOX2-OT-247ENST00000628347 GPM6BQ13491 265 aa14.19□□□□□ -0.14
SOX2-OT-247ENST00000628347 LEXMQ3ZCV2 418 aa14.19□□□□□ -0.14
SOX2-OT-247ENST00000628347 BLOC1S2Q6QNY1 142 aa14.19□□□□□ -0.14
SOX2-OT-247ENST00000628347 POTEBQ6S5H4 581 aa14.19□□□□□ -0.14
SOX2-OT-247ENST00000628347 PLA2G4DQ86XP0 818 aa14.19□□□□□ -0.14
SOX2-OT-247ENST00000628347 NME8Q8N427 588 aa14.19□□□□□ -0.14
SOX2-OT-247ENST00000628347 FIBCD1Q8N539 461 aa14.19□□□□□ -0.14
SOX2-OT-247ENST00000628347 CCDC12Q8WUD4 166 aaPredicted RBP14.19□□□□□ -0.14
SOX2-OT-247ENST00000628347 CLP1Q92989 425 aaKnown RBP14.19□□□□□ -0.14
SOX2-OT-247ENST00000628347 ZNF689Q96CS4 500 aaPredicted RBP14.19□□□□□ -0.14
SOX2-OT-247ENST00000628347 JAKMIP1Q96N16 626 aaKnown RBP14.19□□□□□ -0.14
SOX2-OT-247ENST00000628347 FTHL17Q9BXU8 183 aa14.19□□□□□ -0.14
SOX2-OT-247ENST00000628347 AGO3Q9H9G7 860 aaKnown RBP14.19□□□□□ -0.14
SOX2-OT-247ENST00000628347 COL1A2P08123 1366 aa14.19□□□□□ -0.14
SOX2-OT-247ENST00000628347 ADGRA3Q8IWK6 1321 aa14.18□□□□□ -0.14
SOX2-OT-247ENST00000628347 IGSF9BQ9UPX0 1349 aa14.18□□□□□ -0.14
SOX2-OT-247ENST00000628347 FAM86B1E9PN63 330 aa14.18□□□□□ -0.14
SOX2-OT-247ENST00000628347 DHX15O43143 795 aaKnown RBP14.18□□□□□ -0.14
SOX2-OT-247ENST00000628347 EPB41L2O43491 1005 aaKnown RBP14.18□□□□□ -0.14
SOX2-OT-247ENST00000628347 HBP1O60381 514 aa14.18□□□□□ -0.14
SOX2-OT-247ENST00000628347 CCNE2O96020 404 aa14.18□□□□□ -0.14
SOX2-OT-247ENST00000628347 FAM86B2P0C5J1 330 aa14.18□□□□□ -0.14
SOX2-OT-247ENST00000628347 CPA1P15085 419 aa14.18□□□□□ -0.14
SOX2-OT-247ENST00000628347 RPS6KB1P23443 525 aa14.18□□□□□ -0.14
SOX2-OT-247ENST00000628347 CD52P31358 61 aa14.18□□□□□ -0.14
SOX2-OT-247ENST00000628347 SETQ01105 290 aaPredicted RBP14.18□□□□□ -0.14
SOX2-OT-247ENST00000628347 COL19A1Q14993 1142 aa14.18□□□□□ -0.14
SOX2-OT-247ENST00000628347 PKN1Q16512 942 aa14.18□□□□□ -0.14
SOX2-OT-247ENST00000628347 JAKMIP3Q5VZ66 844 aa14.18□□□□□ -0.14
SOX2-OT-247ENST00000628347 FAM160B1Q5W0V3 765 aa14.18□□□□□ -0.14
SOX2-OT-247ENST00000628347 CRIPAKQ8N1N5 446 aa14.18□□□□□ -0.14
SOX2-OT-247ENST00000628347 ATP8B4Q8TF62 1192 aa14.18□□□□□ -0.14
SOX2-OT-247ENST00000628347 LINC01599Q8WXQ3 324 aa14.18□□□□□ -0.14
SOX2-OT-247ENST00000628347 BRF1Q92994 677 aa14.18□□□□□ -0.14
SOX2-OT-247ENST00000628347 ZBTB10Q96DT7 871 aa14.18□□□□□ -0.14
SOX2-OT-247ENST00000628347 FAM49AQ9H0Q0 323 aaPredicted RBP14.18□□□□□ -0.14
SOX2-OT-247ENST00000628347 LMAN2LQ9H0V9 348 aa14.18□□□□□ -0.14
SOX2-OT-247ENST00000628347 C6orf50Q9HD87 102 aa14.18□□□□□ -0.14
SOX2-OT-247ENST00000628347 LOXHD1Q8IVV2 1947 aa14.17□□□□□ -0.14
SOX2-OT-247ENST00000628347 M0QZ92 97 aa14.17□□□□□ -0.14
SOX2-OT-247ENST00000628347 DGKIO75912 1065 aa14.17□□□□□ -0.14
SOX2-OT-247ENST00000628347 PSMA5P28066 241 aa14.17□□□□□ -0.14
SOX2-OT-247ENST00000628347 GNA11P29992 359 aa14.17□□□□□ -0.14
SOX2-OT-247ENST00000628347 BMPR1AP36894 532 aa14.17□□□□□ -0.14
SOX2-OT-247ENST00000628347 EVCP57679 992 aa14.17□□□□□ -0.14
SOX2-OT-247ENST00000628347 NTRK3Q16288 839 aa14.17□□□□□ -0.14
SOX2-OT-247ENST00000628347 ZNF484Q5JVG2 852 aa14.17□□□□□ -0.14
SOX2-OT-247ENST00000628347 MTHFD1LQ6UB35 978 aa14.17□□□□□ -0.14
SOX2-OT-247ENST00000628347 RTN4RL1Q86UN2 441 aaPredicted RBP14.17□□□□□ -0.14
SOX2-OT-247ENST00000628347 CCDC60Q8IWA6 550 aaPredicted RBP14.17□□□□□ -0.14
SOX2-OT-247ENST00000628347 REXO1Q8N1G1 1221 aaKnown RBP14.17□□□□□ -0.14
SOX2-OT-247ENST00000628347 BANK1Q8NDB2 785 aa14.17□□□□□ -0.14
SOX2-OT-247ENST00000628347 TRAPPC12Q8WVT3 735 aa14.17□□□□□ -0.14
SOX2-OT-247ENST00000628347 RNF26Q9BY78 433 aaPredicted RBP14.17□□□□□ -0.14
SOX2-OT-247ENST00000628347 CELF4Q9BZC1 486 aaKnown RBP14.17□□□□□ -0.14
SOX2-OT-247ENST00000628347 TBC1D22BQ9NU19 505 aa14.17□□□□□ -0.14
SOX2-OT-247ENST00000628347 NAP1L2Q9ULW6 460 aaPredicted RBP14.17□□□□□ -0.14
SOX2-OT-247ENST00000628347 ATG2AQ2TAZ0 1938 aa14.16□□□□□ -0.14
SOX2-OT-247ENST00000628347 IPO5O00410 1097 aaKnown RBP14.16□□□□□ -0.14
SOX2-OT-247ENST00000628347 REC8O95072 547 aa14.16□□□□□ -0.14
SOX2-OT-247ENST00000628347 IFNAR1P17181 557 aa14.16□□□□□ -0.14
SOX2-OT-247ENST00000628347 COL9A1P20849 921 aa14.16□□□□□ -0.14
SOX2-OT-247ENST00000628347 CIITAP33076 1130 aa14.16□□□□□ -0.14
SOX2-OT-247ENST00000628347 CTNNB1P35222 781 aa14.16□□□□□ -0.14
SOX2-OT-247ENST00000628347 ZNF746Q6NUN9 644 aaPredicted RBP14.16□□□□□ -0.14
SOX2-OT-247ENST00000628347 MIS18BP1Q6P0N0 1132 aa14.16□□□□□ -0.14
SOX2-OT-247ENST00000628347 NPAS4Q8IUM7 802 aa14.16□□□□□ -0.14
SOX2-OT-247ENST00000628347 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.16□□□□□ -0.14
SOX2-OT-247ENST00000628347 BICD2Q8TD16 824 aa14.16□□□□□ -0.14
SOX2-OT-247ENST00000628347 NEK9Q8TD19 979 aa14.16□□□□□ -0.14
SOX2-OT-247ENST00000628347 C11orf84Q9BUA3 381 aaPredicted RBP14.16□□□□□ -0.14
SOX2-OT-247ENST00000628347 PLVAPQ9BX97 442 aa14.16□□□□□ -0.14
SOX2-OT-247ENST00000628347 C1QTNF1Q9BXJ1 281 aa14.16□□□□□ -0.14
SOX2-OT-247ENST00000628347 NSUN3Q9H649 340 aaKnown RBP14.16□□□□□ -0.14
SOX2-OT-247ENST00000628347 ZNF302Q9NR11 478 aa14.16□□□□□ -0.14
SOX2-OT-247ENST00000628347 PADI3Q9ULW8 664 aa14.16□□□□□ -0.14
SOX2-OT-247ENST00000628347 MYO7AQ13402 2215 aa14.16□□□□□ -0.14
SOX2-OT-247ENST00000628347 MYH9P35579 1960 aaKnown RBP14.15□□□□□ -0.14
SOX2-OT-247ENST00000628347 ZBTB42B2RXF5 422 aa14.15□□□□□ -0.14
SOX2-OT-247ENST00000628347 DDX39AO00148 427 aaKnown RBP14.15□□□□□ -0.14
SOX2-OT-247ENST00000628347 BACH1O14867 736 aa14.15□□□□□ -0.14
SOX2-OT-247ENST00000628347 ADAMTS3O15072 1205 aa14.15□□□□□ -0.14
SOX2-OT-247ENST00000628347 ATP4AP20648 1035 aa14.15□□□□□ -0.14
SOX2-OT-247ENST00000628347 KCNA5P22460 613 aa14.15□□□□□ -0.14
SOX2-OT-247ENST00000628347 KLRC1P26715 233 aa14.15□□□□□ -0.14
SOX2-OT-247ENST00000628347 KRT76Q01546 638 aa14.15□□□□□ -0.14
SOX2-OT-247ENST00000628347 AKAP17AQ02040 695 aaKnown RBP14.15□□□□□ -0.14
SOX2-OT-247ENST00000628347 PAK2Q13177 524 aa14.15□□□□□ -0.14
SOX2-OT-247ENST00000628347 BTG3Q14201 252 aaPredicted RBP14.15□□□□□ -0.14
SOX2-OT-247ENST00000628347 PUS10Q3MIT2 529 aaKnown RBP14.15□□□□□ -0.14
SOX2-OT-247ENST00000628347 TCEAL5Q5H9L2 206 aa14.15□□□□□ -0.14
SOX2-OT-247ENST00000628347 PDXDC2PQ6P474 469 aa14.15□□□□□ -0.14
SOX2-OT-247ENST00000628347 SMAP1Q8IYB5 467 aaPredicted RBP14.15□□□□□ -0.14
SOX2-OT-247ENST00000628347 CMTR2Q8IYT2 770 aaKnown RBP14.15□□□□□ -0.14
SOX2-OT-247ENST00000628347 CCDC148Q8NFR7 591 aa14.15□□□□□ -0.14
SOX2-OT-247ENST00000628347 PABPC5Q96DU9 382 aaKnown RBP14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms