RNA–Protein interactions for RNA: ENST00000625617.2

TUBB3-215, Transcript of tubulin beta 3 class III, humanhuman

TSL 4 BASIC

Gene TUBB3, Length 570 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-215ENST00000625617 POTEBQ6S5H4 581 aa16.51■□□□□ 0.23
TUBB3-215ENST00000625617 PLPPR4Q7Z2D5 763 aa16.51■□□□□ 0.23
TUBB3-215ENST00000625617 ADHFE1Q8IWW8 467 aa16.51■□□□□ 0.23
TUBB3-215ENST00000625617 ZNF713Q8N859 430 aaPredicted RBP16.51■□□□□ 0.23
TUBB3-215ENST00000625617 PPP2R3CQ969Q6 453 aa16.51■□□□□ 0.23
TUBB3-215ENST00000625617 AGO4Q9HCK5 861 aaKnown RBP16.51■□□□□ 0.23
TUBB3-215ENST00000625617 PADI3Q9ULW8 664 aa16.51■□□□□ 0.23
TUBB3-215ENST00000625617 SMIM35A0A1B0GVV1 85 aa16.5■□□□□ 0.23
TUBB3-215ENST00000625617 GOLGA8AA7E2F4 631 aa16.5■□□□□ 0.23
TUBB3-215ENST00000625617 GOLGA8BA8MQT2 603 aa16.5■□□□□ 0.23
TUBB3-215ENST00000625617 STXBP3O00186 592 aa16.5■□□□□ 0.23
TUBB3-215ENST00000625617 ZBTB43O43298 467 aa16.5■□□□□ 0.23
TUBB3-215ENST00000625617 TBX10O75333 385 aa16.5■□□□□ 0.23
TUBB3-215ENST00000625617 ARP10275 920 aa16.5■□□□□ 0.23
TUBB3-215ENST00000625617 SCG2P13521 617 aa16.5■□□□□ 0.23
TUBB3-215ENST00000625617 HOXD11P31277 338 aaPredicted RBP16.5■□□□□ 0.23
TUBB3-215ENST00000625617 LTBRP36941 435 aa16.5■□□□□ 0.23
TUBB3-215ENST00000625617 SREBF1P36956 1147 aa16.5■□□□□ 0.23
TUBB3-215ENST00000625617 SLC26A2P50443 739 aa16.5■□□□□ 0.23
TUBB3-215ENST00000625617 FUT2Q10981 343 aa16.5■□□□□ 0.23
TUBB3-215ENST00000625617 CLUL1Q15846 466 aa16.5■□□□□ 0.23
TUBB3-215ENST00000625617 CSPP1Q1MSJ5 1256 aa16.5■□□□□ 0.23
TUBB3-215ENST00000625617 PAN2Q504Q3 1202 aaKnown RBP16.5■□□□□ 0.23
TUBB3-215ENST00000625617 P2RX5Q93086 422 aa16.5■□□□□ 0.23
TUBB3-215ENST00000625617 TCEANC2Q96MN5 208 aa16.5■□□□□ 0.23
TUBB3-215ENST00000625617 NEK1Q96PY6 1258 aa16.5■□□□□ 0.23
TUBB3-215ENST00000625617 POP1Q99575 1024 aaKnown RBP16.5■□□□□ 0.23
TUBB3-215ENST00000625617 CELF4Q9BZC1 486 aaKnown RBP16.5■□□□□ 0.23
TUBB3-215ENST00000625617 GLT8D2Q9H1C3 349 aa16.5■□□□□ 0.23
TUBB3-215ENST00000625617 ALG13Q9NP73 1137 aaKnown RBP16.5■□□□□ 0.23
TUBB3-215ENST00000625617 KDM3AQ9Y4C1 1321 aa16.49■□□□□ 0.23
TUBB3-215ENST00000625617 DDX39AO00148 427 aaKnown RBP16.49■□□□□ 0.23
TUBB3-215ENST00000625617 BACH1O14867 736 aa16.49■□□□□ 0.23
TUBB3-215ENST00000625617 ZNF76P36508 570 aa16.49■□□□□ 0.23
TUBB3-215ENST00000625617 KRT76Q01546 638 aa16.49■□□□□ 0.23
TUBB3-215ENST00000625617 DLX2Q07687 328 aaPredicted RBP16.49■□□□□ 0.23
TUBB3-215ENST00000625617 SMAD4Q13485 552 aaKnown RBP16.49■□□□□ 0.23
TUBB3-215ENST00000625617 NAALADL2Q58DX5 795 aa16.49■□□□□ 0.23
TUBB3-215ENST00000625617 FAM160B1Q5W0V3 765 aa16.49■□□□□ 0.23
TUBB3-215ENST00000625617 MTHFD1LQ6UB35 978 aa16.49■□□□□ 0.23
TUBB3-215ENST00000625617 NLRC5Q86WI3 1866 aa16.49■□□□□ 0.23
TUBB3-215ENST00000625617 UIMC1Q96RL1 719 aa16.49■□□□□ 0.23
TUBB3-215ENST00000625617 BARHL2Q9NY43 387 aa16.49■□□□□ 0.23
TUBB3-215ENST00000625617 LRFN2Q9ULH4 789 aa16.49■□□□□ 0.23
TUBB3-215ENST00000625617 PLAGL2Q9UPG8 496 aa16.49■□□□□ 0.23
TUBB3-215ENST00000625617 V9GY48 417 aaPredicted RBP16.49■□□□□ 0.23
TUBB3-215ENST00000625617 SMCO2A6NFE2 343 aa16.48■□□□□ 0.23
TUBB3-215ENST00000625617 C19orf67A6NJJ6 358 aa16.48■□□□□ 0.23
TUBB3-215ENST00000625617 MEIS1O00470 390 aa16.48■□□□□ 0.23
TUBB3-215ENST00000625617 HBP1O60381 514 aa16.48■□□□□ 0.23
TUBB3-215ENST00000625617 ATG7O95352 703 aa16.48■□□□□ 0.23
TUBB3-215ENST00000625617 CCNE2O96020 404 aa16.48■□□□□ 0.23
TUBB3-215ENST00000625617 ITGB1P05556 798 aa16.48■□□□□ 0.23
TUBB3-215ENST00000625617 IBSPP21815 317 aaPredicted RBP16.48■□□□□ 0.23
TUBB3-215ENST00000625617 GTF2F1P35269 517 aaKnown RBP eCLIP16.48■□□□□ 0.23
TUBB3-215ENST00000625617 SMAD2Q15796 467 aaKnown RBP16.48■□□□□ 0.23
TUBB3-215ENST00000625617 TMEM266Q2M3C6 531 aa16.48■□□□□ 0.23
TUBB3-215ENST00000625617 BMP2KLQ5H9B9 411 aa16.48■□□□□ 0.23
TUBB3-215ENST00000625617 DHX32Q7L7V1 743 aaKnown RBP16.48■□□□□ 0.23
TUBB3-215ENST00000625617 NIPA1Q7RTP0 329 aa16.48■□□□□ 0.23
TUBB3-215ENST00000625617 RTN4RL1Q86UN2 441 aaPredicted RBP16.48■□□□□ 0.23
TUBB3-215ENST00000625617 CRIPAKQ8N1N5 446 aa16.48■□□□□ 0.23
TUBB3-215ENST00000625617 NME8Q8N427 588 aa16.48■□□□□ 0.23
TUBB3-215ENST00000625617 ATP8B4Q8TF62 1192 aa16.48■□□□□ 0.23
TUBB3-215ENST00000625617 IGFLR1Q9H665 355 aa16.48■□□□□ 0.23
TUBB3-215ENST00000625617 TMEM260Q9NX78 707 aa16.48■□□□□ 0.23
TUBB3-215ENST00000625617 BRPF3Q9ULD4 1205 aa16.48■□□□□ 0.23
TUBB3-215ENST00000625617 GINS2Q9Y248 185 aa16.48■□□□□ 0.23
TUBB3-215ENST00000625617 IGKV6D-21A0A0A0MT36 114 aa16.47■□□□□ 0.23
TUBB3-215ENST00000625617 KLF18A0A0U1RQI7 1052 aa16.47■□□□□ 0.23
TUBB3-215ENST00000625617 LINC01565O15544 149 aa16.47■□□□□ 0.23
TUBB3-215ENST00000625617 MBTPS2O43462 519 aa16.47■□□□□ 0.23
TUBB3-215ENST00000625617 SARSP49591 514 aaKnown RBP16.47■□□□□ 0.23
TUBB3-215ENST00000625617 CLK2P49760 499 aaKnown RBP16.47■□□□□ 0.23
TUBB3-215ENST00000625617 NDUFV1P49821 464 aa16.47■□□□□ 0.23
TUBB3-215ENST00000625617 GATMP50440 423 aa16.47■□□□□ 0.23
TUBB3-215ENST00000625617 RCAN1P53805 252 aa16.47■□□□□ 0.23
TUBB3-215ENST00000625617 NFX1Q12986 1120 aaKnown RBP16.47■□□□□ 0.23
TUBB3-215ENST00000625617 CAMK1Q14012 370 aa16.47■□□□□ 0.23
TUBB3-215ENST00000625617 PDXDC2PQ6P474 469 aa16.47■□□□□ 0.23
TUBB3-215ENST00000625617 PLA2G4DQ86XP0 818 aa16.47■□□□□ 0.23
TUBB3-215ENST00000625617 CCDC60Q8IWA6 550 aaPredicted RBP16.47■□□□□ 0.23
TUBB3-215ENST00000625617 KLHL23Q8NBE8 558 aa16.47■□□□□ 0.23
TUBB3-215ENST00000625617 UPF3BQ9BZI7 483 aaKnown RBP16.47■□□□□ 0.23
TUBB3-215ENST00000625617 TMX1Q9H3N1 280 aa16.47■□□□□ 0.23
TUBB3-215ENST00000625617 CD207Q9UJ71 328 aa16.47■□□□□ 0.23
TUBB3-215ENST00000625617 NAP1L2Q9ULW6 460 aaPredicted RBP16.47■□□□□ 0.23
TUBB3-215ENST00000625617 COL1A2P08123 1366 aa16.47■□□□□ 0.23
TUBB3-215ENST00000625617 TTC3P53804 2025 aa16.46■□□□□ 0.23
TUBB3-215ENST00000625617 KLRC1P26715 233 aa16.46■□□□□ 0.23
TUBB3-215ENST00000625617 IRS1P35568 1242 aa16.46■□□□□ 0.23
TUBB3-215ENST00000625617 EXOSC10Q01780 885 aaKnown RBP16.46■□□□□ 0.23
TUBB3-215ENST00000625617 KRT32Q14532 448 aa16.46■□□□□ 0.23
TUBB3-215ENST00000625617 MIS18BP1Q6P0N0 1132 aa16.46■□□□□ 0.23
TUBB3-215ENST00000625617 ABHD15Q6UXT9 468 aa16.46■□□□□ 0.23
TUBB3-215ENST00000625617 SPPL3Q8TCT6 385 aa16.46■□□□□ 0.23
TUBB3-215ENST00000625617 ERVK-5Q9HDB9 667 aa16.46■□□□□ 0.23
TUBB3-215ENST00000625617 ZNF302Q9NR11 478 aa16.46■□□□□ 0.23
TUBB3-215ENST00000625617 TCEAL9Q9UHQ7 104 aa16.46■□□□□ 0.23
TUBB3-215ENST00000625617 DENND3A2RUS2 1198 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms