RNA–Protein interactions for RNA: ENST00000624069.3

RPL13A-214, Transcript of ribosomal protein L13a, humanhuman

TSL 1 (best)

Gene RPL13A, Length 1,122 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL13A-214ENST00000624069 SORBS3O60504 671 aa17.03■□□□□ 0.32
RPL13A-214ENST00000624069 IRS1P35568 1242 aa17.03■□□□□ 0.32
RPL13A-214ENST00000624069 LAMC2Q13753 1193 aa17.03■□□□□ 0.32
RPL13A-214ENST00000624069 GNL2Q13823 731 aaKnown RBP17.03■□□□□ 0.32
RPL13A-214ENST00000624069 INF2Q27J81 1249 aa17.03■□□□□ 0.32
RPL13A-214ENST00000624069 CELF3Q5SZQ8 465 aaKnown RBP17.03■□□□□ 0.32
RPL13A-214ENST00000624069 GDF6Q6KF10 455 aaPredicted RBP17.03■□□□□ 0.32
RPL13A-214ENST00000624069 NIPA1Q7RTP0 329 aa17.03■□□□□ 0.32
RPL13A-214ENST00000624069 SESTD1Q86VW0 696 aa17.03■□□□□ 0.32
RPL13A-214ENST00000624069 PLA2G4DQ86XP0 818 aa17.03■□□□□ 0.32
RPL13A-214ENST00000624069 ADHFE1Q8IWW8 467 aa17.03■□□□□ 0.32
RPL13A-214ENST00000624069 GIMAP8Q8ND71 665 aaPredicted RBP17.03■□□□□ 0.32
RPL13A-214ENST00000624069 EMID1Q96A84 441 aaPredicted RBP17.03■□□□□ 0.32
RPL13A-214ENST00000624069 PABPC5Q96DU9 382 aaKnown RBP17.03■□□□□ 0.32
RPL13A-214ENST00000624069 MLXIPQ9HAP2 919 aa17.03■□□□□ 0.32
RPL13A-214ENST00000624069 BTBD18B2RXH4 712 aa17.02■□□□□ 0.32
RPL13A-214ENST00000624069 FAM86B1E9PN63 330 aa17.02■□□□□ 0.32
RPL13A-214ENST00000624069 MEIS1O00470 390 aa17.02■□□□□ 0.32
RPL13A-214ENST00000624069 EFCAB14O75071 495 aa17.02■□□□□ 0.32
RPL13A-214ENST00000624069 FAM86B2P0C5J1 330 aa17.02■□□□□ 0.32
RPL13A-214ENST00000624069 CIITAP33076 1130 aa17.02■□□□□ 0.32
RPL13A-214ENST00000624069 USP11P51784 963 aa17.02■□□□□ 0.32
RPL13A-214ENST00000624069 CHMP4BP1P59074 171 aa17.02■□□□□ 0.32
RPL13A-214ENST00000624069 SP2Q02086 613 aa17.02■□□□□ 0.32
RPL13A-214ENST00000624069 IKBKEQ14164 716 aa17.02■□□□□ 0.32
RPL13A-214ENST00000624069 METTL7BQ6UX53 244 aa17.02■□□□□ 0.32
RPL13A-214ENST00000624069 NEK8Q86SG6 692 aa17.02■□□□□ 0.32
RPL13A-214ENST00000624069 PRSS33Q8NF86 280 aa17.02■□□□□ 0.32
RPL13A-214ENST00000624069 CYP2W1Q8TAV3 490 aa17.02■□□□□ 0.32
RPL13A-214ENST00000624069 AFG1LQ8WV93 481 aa17.02■□□□□ 0.32
RPL13A-214ENST00000624069 TNFRSF25Q93038 417 aa17.02■□□□□ 0.32
RPL13A-214ENST00000624069 INTS4Q96HW7 963 aaKnown RBP17.02■□□□□ 0.32
RPL13A-214ENST00000624069 SENP7Q9BQF6 1050 aa17.02■□□□□ 0.32
RPL13A-214ENST00000624069 KCNH7Q9NS40 1196 aa17.02■□□□□ 0.32
RPL13A-214ENST00000624069 PKD2L1Q9P0L9 805 aa17.02■□□□□ 0.32
RPL13A-214ENST00000624069 FAM50BQ9Y247 325 aa17.02■□□□□ 0.32
RPL13A-214ENST00000624069 INSL6Q9Y581 213 aa17.02■□□□□ 0.32
RPL13A-214ENST00000624069 PTPRSQ13332 1948 aa17.02■□□□□ 0.31
RPL13A-214ENST00000624069 IGLV3-22A0A075B6J6 115 aa17.01■□□□□ 0.31
RPL13A-214ENST00000624069 H3BQV1 296 aa17.01■□□□□ 0.31
RPL13A-214ENST00000624069 NOP56O00567 594 aaKnown RBP17.01■□□□□ 0.31
RPL13A-214ENST00000624069 MMP3P08254 477 aa17.01■□□□□ 0.31
RPL13A-214ENST00000624069 CKBP12277 381 aa17.01■□□□□ 0.31
RPL13A-214ENST00000624069 KCNA2P16389 499 aa17.01■□□□□ 0.31
RPL13A-214ENST00000624069 HTRA4P83105 476 aaPredicted RBP17.01■□□□□ 0.31
RPL13A-214ENST00000624069 PTPROQ16827 1216 aa17.01■□□□□ 0.31
RPL13A-214ENST00000624069 LETM2Q2VYF4 491 aa17.01■□□□□ 0.31
RPL13A-214ENST00000624069 PRR16Q569H4 304 aa17.01■□□□□ 0.31
RPL13A-214ENST00000624069 TCEAL5Q5H9L2 206 aa17.01■□□□□ 0.31
RPL13A-214ENST00000624069 MYSM1Q5VVJ2 828 aa17.01■□□□□ 0.31
RPL13A-214ENST00000624069 TRAF7Q6Q0C0 670 aa17.01■□□□□ 0.31
RPL13A-214ENST00000624069 CYFIP1Q7L576 1253 aa17.01■□□□□ 0.31
RPL13A-214ENST00000624069 BANK1Q8NDB2 785 aa17.01■□□□□ 0.31
RPL13A-214ENST00000624069 PPTC7Q8NI37 304 aa17.01■□□□□ 0.31
RPL13A-214ENST00000624069 SP7Q8TDD2 431 aaPredicted RBP17.01■□□□□ 0.31
RPL13A-214ENST00000624069 SPATA33Q96N06 139 aa17.01■□□□□ 0.31
RPL13A-214ENST00000624069 FAM205CA6NFA0 338 aa17■□□□□ 0.31
RPL13A-214ENST00000624069 HSP90AA1P07900 732 aaKnown RBP17■□□□□ 0.31
RPL13A-214ENST00000624069 ARP10275 920 aa17■□□□□ 0.31
RPL13A-214ENST00000624069 SP4Q02446 784 aa17■□□□□ 0.31
RPL13A-214ENST00000624069 EPC2Q52LR7 807 aa17■□□□□ 0.31
RPL13A-214ENST00000624069 TIGD5Q53EQ6 642 aa17■□□□□ 0.31
RPL13A-214ENST00000624069 HERC4Q5GLZ8 1057 aaPredicted RBP17■□□□□ 0.31
RPL13A-214ENST00000624069 MOXD1Q6UVY6 613 aa17■□□□□ 0.31
RPL13A-214ENST00000624069 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17■□□□□ 0.311e-18■■■■□ 25.7
RPL13A-214ENST00000624069 KAT2BQ92831 832 aa17■□□□□ 0.31
RPL13A-214ENST00000624069 NAP1L4Q99733 375 aaKnown RBP17■□□□□ 0.31
RPL13A-214ENST00000624069 SDF4Q9BRK5 362 aa17■□□□□ 0.31
RPL13A-214ENST00000624069 FOXP1Q9H334 677 aaPredicted RBP17■□□□□ 0.31
RPL13A-214ENST00000624069 DOCK5Q9H7D0 1870 aa17■□□□□ 0.31
RPL13A-214ENST00000624069 AGO4Q9HCK5 861 aaKnown RBP17■□□□□ 0.31
RPL13A-214ENST00000624069 TANC1Q9C0D5 1861 aa16.99■□□□□ 0.31
RPL13A-214ENST00000624069 H3BNC9 293 aa16.99■□□□□ 0.31
RPL13A-214ENST00000624069 ATP9AO75110 1047 aa16.99■□□□□ 0.31
RPL13A-214ENST00000624069 TDP2O95551 362 aa16.99■□□□□ 0.31
RPL13A-214ENST00000624069 GCFC2P16383 781 aaKnown RBP16.99■□□□□ 0.31
RPL13A-214ENST00000624069 PDCP20941 246 aa16.99■□□□□ 0.31
RPL13A-214ENST00000624069 LTBRP36941 435 aa16.99■□□□□ 0.31
RPL13A-214ENST00000624069 MKRN4PQ13434 485 aaPredicted RBP16.99■□□□□ 0.31
RPL13A-214ENST00000624069 DGKDQ16760 1214 aa16.99■□□□□ 0.31
RPL13A-214ENST00000624069 EARS2Q5JPH6 523 aaKnown RBP16.99■□□□□ 0.31
RPL13A-214ENST00000624069 IER5LQ5T953 404 aa16.99■□□□□ 0.31
RPL13A-214ENST00000624069 LARP1BQ659C4 914 aaKnown RBP16.99■□□□□ 0.31
RPL13A-214ENST00000624069 EP400NLQ6ZTU2 488 aa16.99■□□□□ 0.31
RPL13A-214ENST00000624069 BMP8AQ7Z5Y6 402 aa16.99■□□□□ 0.31
RPL13A-214ENST00000624069 ZNF577Q9BSK1 485 aa16.99■□□□□ 0.31
RPL13A-214ENST00000624069 JPH1Q9HDC5 661 aaPredicted RBP16.99■□□□□ 0.31
RPL13A-214ENST00000624069 FOXD4L1Q9NU39 408 aa16.99■□□□□ 0.31
RPL13A-214ENST00000624069 TCEAL9Q9UHQ7 104 aa16.99■□□□□ 0.31
RPL13A-214ENST00000624069 MUTYHQ9UIF7 546 aa16.99■□□□□ 0.31
RPL13A-214ENST00000624069 NFASCO94856 1347 aa16.98■□□□□ 0.31
RPL13A-214ENST00000624069 CYP3A7-CYP3A51PA0A087WV96 503 aa16.98■□□□□ 0.31
RPL13A-214ENST00000624069 IPO5O00410 1097 aaKnown RBP16.98■□□□□ 0.31
RPL13A-214ENST00000624069 CYP3A7P24462 503 aa16.98■□□□□ 0.31
RPL13A-214ENST00000624069 PTPN5P54829 565 aa16.98■□□□□ 0.31
RPL13A-214ENST00000624069 GPM6BQ13491 265 aa16.98■□□□□ 0.31
RPL13A-214ENST00000624069 MBTPS1Q14703 1052 aa16.98■□□□□ 0.31
RPL13A-214ENST00000624069 TRIM71Q2Q1W2 868 aaKnown RBP16.98■□□□□ 0.31
RPL13A-214ENST00000624069 HSDL1Q3SXM5 330 aa16.98■□□□□ 0.31
RPL13A-214ENST00000624069 MCTP1Q6DN14 999 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms