RNA–Protein interactions for RNA: ENST00000620789.4

LITAF-220, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5 BASIC

Gene LITAF, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-220ENST00000620789 CKBP12277 381 aa20.56■□□□□ 0.88
LITAF-220ENST00000620789 PRKCEQ02156 737 aa20.56■□□□□ 0.88
LITAF-220ENST00000620789 PPIGQ13427 754 aaKnown RBP eCLIP20.56■□□□□ 0.88
LITAF-220ENST00000620789 NCAPH2Q6IBW4 605 aa20.56■□□□□ 0.88
LITAF-220ENST00000620789 BRAPQ7Z569 592 aa20.56■□□□□ 0.88
LITAF-220ENST00000620789 FAM167AQ96KS9 214 aa20.56■□□□□ 0.88
LITAF-220ENST00000620789 PCDHB6Q9Y5E3 794 aa20.56■□□□□ 0.88
LITAF-220ENST00000620789 COL1A2P08123 1366 aa20.56■□□□□ 0.88
LITAF-220ENST00000620789 OATP04181 439 aa20.55■□□□□ 0.88
LITAF-220ENST00000620789 IQCF3P0C7M6 154 aa20.55■□□□□ 0.88
LITAF-220ENST00000620789 EPHA7Q15375 998 aa20.55■□□□□ 0.88
LITAF-220ENST00000620789 ZNF484Q5JVG2 852 aa20.55■□□□□ 0.88
LITAF-220ENST00000620789 C4orf32Q8N8J7 132 aa20.55■□□□□ 0.88
LITAF-220ENST00000620789 BANK1Q8NDB2 785 aa20.55■□□□□ 0.88
LITAF-220ENST00000620789 TRAPPC12Q8WVT3 735 aa20.55■□□□□ 0.88
LITAF-220ENST00000620789 SCLYQ96I15 445 aa20.55■□□□□ 0.88
LITAF-220ENST00000620789 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.55■□□□□ 0.88
LITAF-220ENST00000620789 P4HBP07237 508 aaKnown RBP20.54■□□□□ 0.88
LITAF-220ENST00000620789 SELPP16109 830 aa20.54■□□□□ 0.88
LITAF-220ENST00000620789 THPOP40225 353 aa20.54■□□□□ 0.88
LITAF-220ENST00000620789 EPHB4P54760 987 aa20.54■□□□□ 0.88
LITAF-220ENST00000620789 PSMC5P62195 406 aa20.54■□□□□ 0.88
LITAF-220ENST00000620789 TAF2Q6P1X5 1199 aa20.54■□□□□ 0.88
LITAF-220ENST00000620789 RUFY4Q6ZNE9 571 aa20.54■□□□□ 0.88
LITAF-220ENST00000620789 LRRC8DQ7L1W4 858 aa20.54■□□□□ 0.88
LITAF-220ENST00000620789 TRMT1LQ7Z2T5 733 aaKnown RBP20.54■□□□□ 0.88
LITAF-220ENST00000620789 FERMT3Q86UX7 667 aa20.54■□□□□ 0.88
LITAF-220ENST00000620789 NRBP2Q9NSY0 501 aa20.54■□□□□ 0.88
LITAF-220ENST00000620789 A0A1W2PPC1 479 aa20.53■□□□□ 0.88
LITAF-220ENST00000620789 ZBTB42B2RXF5 422 aa20.53■□□□□ 0.88
LITAF-220ENST00000620789 STX6O43752 255 aa20.53■□□□□ 0.88
LITAF-220ENST00000620789 CAND2O75155 1236 aa20.53■□□□□ 0.88
LITAF-220ENST00000620789 RFC2P35250 354 aa20.53■□□□□ 0.88
LITAF-220ENST00000620789 QARSP47897 775 aaKnown RBP20.53■□□□□ 0.88
LITAF-220ENST00000620789 PTGDRQ13258 359 aa20.53■□□□□ 0.88
LITAF-220ENST00000620789 XKR3Q5GH77 459 aa20.53■□□□□ 0.88
LITAF-220ENST00000620789 ZNF618Q5T7W0 954 aa20.53■□□□□ 0.88
LITAF-220ENST00000620789 MTHFD1LQ6UB35 978 aa20.53■□□□□ 0.88
LITAF-220ENST00000620789 TDHQ8IZJ6 230 aa20.53■□□□□ 0.88
LITAF-220ENST00000620789 ZBTB10Q96DT7 871 aa20.53■□□□□ 0.88
LITAF-220ENST00000620789 IL23AQ9NPF7 189 aa20.53■□□□□ 0.88
LITAF-220ENST00000620789 CEP131Q9UPN4 1083 aa20.53■□□□□ 0.88
LITAF-220ENST00000620789 MTMR6Q9Y217 621 aa20.53■□□□□ 0.88
LITAF-220ENST00000620789 POTEMA6NI47 508 aa20.52■□□□□ 0.88
LITAF-220ENST00000620789 LAD1O00515 517 aa20.52■□□□□ 0.88
LITAF-220ENST00000620789 DKC1O60832 514 aaKnown RBP eCLIP20.52■□□□□ 0.88
LITAF-220ENST00000620789 TRAF7Q6Q0C0 670 aa20.52■□□□□ 0.88
LITAF-220ENST00000620789 RPAINQ86UA6 219 aa20.52■□□□□ 0.88
LITAF-220ENST00000620789 DYDC2Q96IM9 177 aa20.52■□□□□ 0.88
LITAF-220ENST00000620789 LXNQ9BS40 222 aa20.52■□□□□ 0.88
LITAF-220ENST00000620789 PCDHA2Q9Y5H9 948 aa20.52■□□□□ 0.88
LITAF-220ENST00000620789 STBD1O95210 358 aa20.51■□□□□ 0.87
LITAF-220ENST00000620789 PARNO95453 639 aaKnown RBP20.51■□□□□ 0.87
LITAF-220ENST00000620789 KLRC1P26715 233 aa20.51■□□□□ 0.87
LITAF-220ENST00000620789 TECP42680 631 aa20.51■□□□□ 0.87
LITAF-220ENST00000620789 RESTQ13127 1097 aa20.51■□□□□ 0.87
LITAF-220ENST00000620789 TMEM266Q2M3C6 531 aa20.51■□□□□ 0.87
LITAF-220ENST00000620789 C16orf59Q7L2K0 433 aa20.51■□□□□ 0.87
LITAF-220ENST00000620789 RSPH3Q86UC2 560 aa20.51■□□□□ 0.87
LITAF-220ENST00000620789 RPUSD2Q8IZ73 545 aaKnown RBP20.51■□□□□ 0.87
LITAF-220ENST00000620789 SPRYD3Q8NCJ5 442 aa20.51■□□□□ 0.87
LITAF-220ENST00000620789 NEK9Q8TD19 979 aa20.51■□□□□ 0.87
LITAF-220ENST00000620789 EIF2AK1Q9BQI3 630 aaKnown RBP20.51■□□□□ 0.87
LITAF-220ENST00000620789 RGL1Q9NZL6 768 aa20.51■□□□□ 0.87
LITAF-220ENST00000620789 WRAP73Q9P2S5 460 aaPredicted RBP20.51■□□□□ 0.87
LITAF-220ENST00000620789 SEPT9Q9UHD8 586 aaPredicted RBP20.51■□□□□ 0.87
LITAF-220ENST00000620789 SCN5AQ14524 2016 aa20.51■□□□□ 0.87
LITAF-220ENST00000620789 SMIM35A0A1B0GVV1 85 aa20.5■□□□□ 0.87
LITAF-220ENST00000620789 RSPH10B2B2RC85 870 aa20.5■□□□□ 0.87
LITAF-220ENST00000620789 C22orf31O95567 290 aa20.5■□□□□ 0.87
LITAF-220ENST00000620789 RPLP2P05387 115 aaKnown RBP20.5■□□□□ 0.87
LITAF-220ENST00000620789 PFKMP08237 780 aa20.5■□□□□ 0.87
LITAF-220ENST00000620789 RSPH10BP0C881 870 aa20.5■□□□□ 0.87
LITAF-220ENST00000620789 ACRP10323 421 aa20.5■□□□□ 0.87
LITAF-220ENST00000620789 PRPHP41219 470 aa20.5■□□□□ 0.87
LITAF-220ENST00000620789 FXR2P51116 673 aaKnown RBP eCLIP20.5■□□□□ 0.87
LITAF-220ENST00000620789 CYP4A11Q02928 519 aa20.5■□□□□ 0.87
LITAF-220ENST00000620789 SHHQ15465 462 aa20.5■□□□□ 0.87
LITAF-220ENST00000620789 C9orf50Q5SZB4 431 aa20.5■□□□□ 0.87
LITAF-220ENST00000620789 PSRC1Q6PGN9 363 aaPredicted RBP20.5■□□□□ 0.87
LITAF-220ENST00000620789 C4orf19Q8IY42 314 aa20.5■□□□□ 0.87
LITAF-220ENST00000620789 DNAJB3Q8WWF6 145 aa20.5■□□□□ 0.87
LITAF-220ENST00000620789 VWCEQ96DN2 955 aa20.5■□□□□ 0.87
LITAF-220ENST00000620789 HSD17B14Q9BPX1 270 aa20.5■□□□□ 0.87
LITAF-220ENST00000620789 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.5■□□□□ 0.87
LITAF-220ENST00000620789 NIFKQ9BYG3 293 aaKnown RBP20.5■□□□□ 0.87
LITAF-220ENST00000620789 ZSWIM4Q9H7M6 989 aa20.5■□□□□ 0.87
LITAF-220ENST00000620789 TRIOBPQ9H2D6 2365 aa20.49■□□□□ 0.87
LITAF-220ENST00000620789 DDX11L8A8MPP1 907 aa20.49■□□□□ 0.87
LITAF-220ENST00000620789 SLITRK3O94933 977 aa20.49■□□□□ 0.87
LITAF-220ENST00000620789 CTSHP09668 335 aa20.49■□□□□ 0.87
LITAF-220ENST00000620789 PDIA4P13667 645 aaKnown RBP20.49■□□□□ 0.87
LITAF-220ENST00000620789 ATP2C1P98194 919 aaPredicted RBP20.49■□□□□ 0.87
LITAF-220ENST00000620789 CTTNQ14247 550 aaKnown RBP20.49■□□□□ 0.87
LITAF-220ENST00000620789 GPNMBQ14956 572 aa20.49■□□□□ 0.87
LITAF-220ENST00000620789 TARBP2Q15633 366 aaKnown RBP20.49■□□□□ 0.87
LITAF-220ENST00000620789 FAM26DQ5JW98 314 aa20.49■□□□□ 0.87
LITAF-220ENST00000620789 TMEM240Q5SV17 173 aa20.49■□□□□ 0.87
LITAF-220ENST00000620789 ANO5Q75V66 913 aa20.49■□□□□ 0.87
LITAF-220ENST00000620789 DEFB128Q7Z7B8 93 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms