RNA–Protein interactions for RNA: ENST00000620676.4

VPS13D-214, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13D, Length 16,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-214ENST00000620676 PARP2Q9UGN5 583 aa5.42□□□□□ -1.54
VPS13D-214ENST00000620676 HOOK2Q96ED9 719 aa5.41□□□□□ -1.54
VPS13D-214ENST00000620676 THAP11Q96EK4 314 aa5.41□□□□□ -1.54
VPS13D-214ENST00000620676 XAGE2Q96GT9 111 aa5.41□□□□□ -1.54
VPS13D-214ENST00000620676 CCDC90BQ9GZT6 254 aa5.41□□□□□ -1.54
VPS13D-214ENST00000620676 PRAG1Q86YV5 1406 aa5.41□□□□□ -1.54
VPS13D-214ENST00000620676 GPAA1O43292 621 aa5.41□□□□□ -1.54
VPS13D-214ENST00000620676 STAT2P52630 851 aa5.41□□□□□ -1.54
VPS13D-214ENST00000620676 TMPRSS15P98073 1019 aa5.41□□□□□ -1.54
VPS13D-214ENST00000620676 PICALMQ13492 652 aa5.41□□□□□ -1.54
VPS13D-214ENST00000620676 TAF1BQ53T94 588 aaPredicted RBP5.41□□□□□ -1.54
VPS13D-214ENST00000620676 TRIM65Q6PJ69 517 aa5.41□□□□□ -1.54
VPS13D-214ENST00000620676 FUKQ8N0W3 1084 aa5.41□□□□□ -1.54
VPS13D-214ENST00000620676 PBKQ96KB5 322 aa5.41□□□□□ -1.54
VPS13D-214ENST00000620676 H7C1D1 291 aa5.41□□□□□ -1.54
VPS13D-214ENST00000620676 NDUFB5O43674 189 aa5.41□□□□□ -1.54
VPS13D-214ENST00000620676 ZRANB2O95218 330 aaKnown RBP eCLIP5.41□□□□□ -1.54
VPS13D-214ENST00000620676 STMN1P16949 149 aa5.41□□□□□ -1.54
VPS13D-214ENST00000620676 NFKBIAP25963 317 aa5.41□□□□□ -1.54
VPS13D-214ENST00000620676 HSD17B3P37058 310 aa5.41□□□□□ -1.54
VPS13D-214ENST00000620676 TUFMP49411 452 aaKnown RBP5.41□□□□□ -1.54
VPS13D-214ENST00000620676 TRIM16LQ309B1 348 aa5.41□□□□□ -1.54
VPS13D-214ENST00000620676 CC2D2BQ6DHV5 1058 aa5.41□□□□□ -1.54
VPS13D-214ENST00000620676 METTL16Q86W50 562 aaKnown RBP5.41□□□□□ -1.54
VPS13D-214ENST00000620676 CCDC103Q8IW40 242 aa5.41□□□□□ -1.54
VPS13D-214ENST00000620676 NDC80O14777 642 aa5.41□□□□□ -1.54
VPS13D-214ENST00000620676 GCNT3O95395 438 aa5.41□□□□□ -1.54
VPS13D-214ENST00000620676 MAPK11Q15759 364 aa5.41□□□□□ -1.54
VPS13D-214ENST00000620676 ZNF354CQ86Y25 554 aa5.41□□□□□ -1.54
VPS13D-214ENST00000620676 AGAP11Q8TF27 550 aa5.41□□□□□ -1.54
VPS13D-214ENST00000620676 MEI4A8MW99 385 aa5.41□□□□□ -1.54
VPS13D-214ENST00000620676 HSPA9P38646 679 aaKnown RBP5.41□□□□□ -1.54
VPS13D-214ENST00000620676 SIX6OS1Q8N1H7 587 aa5.41□□□□□ -1.54
VPS13D-214ENST00000620676 WBP4O75554 376 aaKnown RBP5.41□□□□□ -1.54
VPS13D-214ENST00000620676 FGAP02671 866 aa5.41□□□□□ -1.54
VPS13D-214ENST00000620676 PRCPP42785 496 aa5.41□□□□□ -1.54
VPS13D-214ENST00000620676 ARHGEF18Q6ZSZ5 1173 aa5.41□□□□□ -1.54
VPS13D-214ENST00000620676 RSPH3Q86UC2 560 aa5.41□□□□□ -1.54
VPS13D-214ENST00000620676 ASAP1Q9ULH1 1129 aa5.41□□□□□ -1.54
VPS13D-214ENST00000620676 AOX1Q06278 1338 aa5.41□□□□□ -1.54
VPS13D-214ENST00000620676 TRPC1P48995 793 aa5.41□□□□□ -1.54
VPS13D-214ENST00000620676 CCR3P51677 355 aa5.41□□□□□ -1.54
VPS13D-214ENST00000620676 BFSP1Q12934 665 aa5.41□□□□□ -1.54
VPS13D-214ENST00000620676 SNX30Q5VWJ9 437 aa5.41□□□□□ -1.54
VPS13D-214ENST00000620676 P3H4Q92791 437 aa5.41□□□□□ -1.54
VPS13D-214ENST00000620676 UNC45AQ9H3U1 944 aa5.41□□□□□ -1.54
VPS13D-214ENST00000620676 SYNJ2BP-COX16A0A087WUM0 186 aa5.41□□□□□ -1.54
VPS13D-214ENST00000620676 ESYT2A0FGR8 921 aa5.41□□□□□ -1.54
VPS13D-214ENST00000620676 CALUO43852 315 aaPredicted RBP5.41□□□□□ -1.54
VPS13D-214ENST00000620676 MGEA5O60502 916 aa5.41□□□□□ -1.54
VPS13D-214ENST00000620676 FSBPO95073 299 aa5.41□□□□□ -1.54
VPS13D-214ENST00000620676 SLC4A1P02730 911 aa5.41□□□□□ -1.54
VPS13D-214ENST00000620676 RALGDSQ12967 914 aa5.41□□□□□ -1.54
VPS13D-214ENST00000620676 KCNV1Q6PIU1 500 aa5.41□□□□□ -1.54
VPS13D-214ENST00000620676 GPBP1Q86WP2 473 aa5.41□□□□□ -1.54
VPS13D-214ENST00000620676 CAPSLQ8WWF8 208 aa5.41□□□□□ -1.54
VPS13D-214ENST00000620676 ZFYVE19Q96K21 471 aa5.41□□□□□ -1.54
VPS13D-214ENST00000620676 DNAAF2Q9NVR5 837 aaKnown RBP5.41□□□□□ -1.54
VPS13D-214ENST00000620676 POLR3EQ9NVU0 708 aa5.41□□□□□ -1.54
VPS13D-214ENST00000620676 COX16Q9P0S2 106 aa5.41□□□□□ -1.54
VPS13D-214ENST00000620676 FRMPD2Q68DX3 1309 aaPredicted RBP5.41□□□□□ -1.54
VPS13D-214ENST00000620676 A0A1B0GVG6 124 aa5.41□□□□□ -1.54
VPS13D-214ENST00000620676 ZNF233A6NK53 670 aa5.41□□□□□ -1.54
VPS13D-214ENST00000620676 E7ENQ6 273 aa5.41□□□□□ -1.54
VPS13D-214ENST00000620676 MTDHQ86UE4 582 aaKnown RBP5.41□□□□□ -1.54
VPS13D-214ENST00000620676 ZSCAN18Q8TBC5 510 aaPredicted RBP5.41□□□□□ -1.54
VPS13D-214ENST00000620676 TRAIPQ9BWF2 469 aa5.41□□□□□ -1.54
VPS13D-214ENST00000620676 KLHL11Q9NVR0 708 aa5.41□□□□□ -1.54
VPS13D-214ENST00000620676 SH3BP5O60239 455 aa5.41□□□□□ -1.54
VPS13D-214ENST00000620676 EXOC8Q8IYI6 725 aa5.41□□□□□ -1.54
VPS13D-214ENST00000620676 VIPAS39Q9H9C1 493 aa5.41□□□□□ -1.54
VPS13D-214ENST00000620676 GID8Q9NWU2 228 aa5.41□□□□□ -1.54
VPS13D-214ENST00000620676 STAP2Q9UGK3 403 aa5.41□□□□□ -1.54
VPS13D-214ENST00000620676 TRPC5Q9UL62 973 aaPredicted RBP5.41□□□□□ -1.54
VPS13D-214ENST00000620676 NPC1L1Q9UHC9 1359 aa5.41□□□□□ -1.54
VPS13D-214ENST00000620676 ARHGAP10A1A4S6 786 aa5.41□□□□□ -1.54
VPS13D-214ENST00000620676 CIITAP33076 1130 aa5.41□□□□□ -1.54
VPS13D-214ENST00000620676 CBX3Q13185 183 aa5.41□□□□□ -1.54
VPS13D-214ENST00000620676 NR1I3Q14994 352 aa5.41□□□□□ -1.54
VPS13D-214ENST00000620676 MAP3K21Q5TCX8 1036 aa5.41□□□□□ -1.54
VPS13D-214ENST00000620676 RNF207Q6ZRF8 634 aa5.41□□□□□ -1.54
VPS13D-214ENST00000620676 CCDC87Q9NVE4 849 aa5.41□□□□□ -1.54
VPS13D-214ENST00000620676 ARMCX3Q9UH62 379 aaPredicted RBP5.41□□□□□ -1.54
VPS13D-214ENST00000620676 SNX12Q9UMY4 172 aa5.41□□□□□ -1.54
VPS13D-214ENST00000620676 DLATP10515 647 aaKnown RBP5.41□□□□□ -1.54
VPS13D-214ENST00000620676 ADAM9Q13443 819 aa5.41□□□□□ -1.54
VPS13D-214ENST00000620676 C6orf183Q5T699 404 aa5.41□□□□□ -1.54
VPS13D-214ENST00000620676 ZNF746Q6NUN9 644 aaPredicted RBP5.41□□□□□ -1.54
VPS13D-214ENST00000620676 TSEN2Q8NCE0 465 aaKnown RBP5.41□□□□□ -1.54
VPS13D-214ENST00000620676 CORO1CQ9ULV4 474 aaPredicted RBP5.41□□□□□ -1.54
VPS13D-214ENST00000620676 MROH7-TTC4A0A0A0MT08 1334 aa5.41□□□□□ -1.54
VPS13D-214ENST00000620676 MAGEA13PA6NCF6 341 aa5.41□□□□□ -1.54
VPS13D-214ENST00000620676 TRIP10Q15642 601 aa5.41□□□□□ -1.54
VPS13D-214ENST00000620676 MSANTD4Q8NCY6 345 aa5.41□□□□□ -1.54
VPS13D-214ENST00000620676 ZWILCHQ9H900 591 aa5.41□□□□□ -1.54
VPS13D-214ENST00000620676 LIMA1Q9UHB6 759 aaKnown RBP5.41□□□□□ -1.54
VPS13D-214ENST00000620676 APPL1Q9UKG1 709 aa5.41□□□□□ -1.54
VPS13D-214ENST00000620676 H2AFZP0C0S5 128 aa5.4□□□□□ -1.54
VPS13D-214ENST00000620676 JADE1Q6IE81 842 aa5.4□□□□□ -1.54
VPS13D-214ENST00000620676 H2AFVQ71UI9 128 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms