RNA–Protein interactions for RNA: ENST00000619119.4

SEMA3B-214, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 3,158 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-214ENST00000619119 MAGEA8P43361 318 aa17.28■□□□□ 0.36
SEMA3B-214ENST00000619119 POLE2P56282 527 aa17.28■□□□□ 0.36
SEMA3B-214ENST00000619119 PODNQ7Z5L7 613 aa17.28■□□□□ 0.36
SEMA3B-214ENST00000619119 TAX1BP1Q86VP1 789 aa17.28■□□□□ 0.36
SEMA3B-214ENST00000619119 IFT20Q8IY31 132 aa17.28■□□□□ 0.36
SEMA3B-214ENST00000619119 TRIML1Q8N9V2 468 aa17.28■□□□□ 0.36
SEMA3B-214ENST00000619119 NEDD1Q8NHV4 660 aa17.28■□□□□ 0.36
SEMA3B-214ENST00000619119 UBA5Q9GZZ9 404 aa17.28■□□□□ 0.36
SEMA3B-214ENST00000619119 TAF1DQ9H5J8 278 aaPredicted RBP17.28■□□□□ 0.36
SEMA3B-214ENST00000619119 STXBP3O00186 592 aa17.28■□□□□ 0.36
SEMA3B-214ENST00000619119 IMPDH2P12268 514 aa17.28■□□□□ 0.36
SEMA3B-214ENST00000619119 PTPREP23469 700 aa17.28■□□□□ 0.36
SEMA3B-214ENST00000619119 COPB1P53618 953 aaKnown RBP17.28■□□□□ 0.36
SEMA3B-214ENST00000619119 KRT83P78385 493 aa17.28■□□□□ 0.36
SEMA3B-214ENST00000619119 UBXN1Q04323 297 aa17.28■□□□□ 0.36
SEMA3B-214ENST00000619119 RIPK1Q13546 671 aa17.28■□□□□ 0.36
SEMA3B-214ENST00000619119 PDIA5Q14554 519 aa17.28■□□□□ 0.36
SEMA3B-214ENST00000619119 PLEKHG4BQ96PX9 1271 aa17.28■□□□□ 0.36
SEMA3B-214ENST00000619119 CNOT8Q9UFF9 292 aaKnown RBP17.28■□□□□ 0.36
SEMA3B-214ENST00000619119 SLC12A6Q9UHW9 1150 aa17.28■□□□□ 0.36
SEMA3B-214ENST00000619119 CEP131Q9UPN4 1083 aa17.28■□□□□ 0.36
SEMA3B-214ENST00000619119 PCDHGA4Q9Y5G9 962 aa17.28■□□□□ 0.36
SEMA3B-214ENST00000619119 GCOM1H8Y6P7 765 aaPredicted RBP17.28■□□□□ 0.36
SEMA3B-214ENST00000619119 MYZAPP0CAP1 466 aa17.28■□□□□ 0.36
SEMA3B-214ENST00000619119 MCM7P33993 719 aa17.28■□□□□ 0.36
SEMA3B-214ENST00000619119 NUGGCQ68CJ6 796 aa17.28■□□□□ 0.36
SEMA3B-214ENST00000619119 ZSCAN29Q8IWY8 852 aaPredicted RBP17.28■□□□□ 0.36
SEMA3B-214ENST00000619119 CCDC197Q8NCU1 140 aa17.28■□□□□ 0.36
SEMA3B-214ENST00000619119 P3H4Q92791 437 aa17.28■□□□□ 0.36
SEMA3B-214ENST00000619119 TMBIM4Q9HC24 238 aa17.28■□□□□ 0.36
SEMA3B-214ENST00000619119 BLOC1S6Q9UL45 172 aa17.28■□□□□ 0.36
SEMA3B-214ENST00000619119 ALDH5A1P51649 535 aaPredicted RBP17.27■□□□□ 0.36
SEMA3B-214ENST00000619119 NT5DC1Q5TFE4 455 aa17.27■□□□□ 0.36
SEMA3B-214ENST00000619119 CCDC170Q8IYT3 715 aa17.27■□□□□ 0.36
SEMA3B-214ENST00000619119 TCP11L1Q9NUJ3 509 aa17.27■□□□□ 0.36
SEMA3B-214ENST00000619119 STK38LQ9Y2H1 464 aa17.27■□□□□ 0.36
SEMA3B-214ENST00000619119 CAPN6Q9Y6Q1 641 aa17.27■□□□□ 0.36
SEMA3B-214ENST00000619119 SLX4Q8IY92 1834 aa17.27■□□□□ 0.36
SEMA3B-214ENST00000619119 C5orf60A6NFR6 353 aa17.27■□□□□ 0.35
SEMA3B-214ENST00000619119 USP17L5A8MUK1 530 aa17.27■□□□□ 0.35
SEMA3B-214ENST00000619119 NCK2O43639 380 aa17.27■□□□□ 0.35
SEMA3B-214ENST00000619119 CUL4BQ13620 913 aa17.27■□□□□ 0.35
SEMA3B-214ENST00000619119 TRADDQ15628 312 aa17.27■□□□□ 0.35
SEMA3B-214ENST00000619119 CDC37Q16543 378 aaPredicted RBP17.27■□□□□ 0.35
SEMA3B-214ENST00000619119 TTC38Q5R3I4 469 aa17.27■□□□□ 0.35
SEMA3B-214ENST00000619119 STYK1Q6J9G0 422 aa17.27■□□□□ 0.35
SEMA3B-214ENST00000619119 SYCP3Q8IZU3 236 aa17.27■□□□□ 0.35
SEMA3B-214ENST00000619119 EPSTI1Q96J88 318 aa17.27■□□□□ 0.35
SEMA3B-214ENST00000619119 SERPINB13Q9UIV8 391 aa17.27■□□□□ 0.35
SEMA3B-214ENST00000619119 LUC7L2Q9Y383 392 aaKnown RBP17.27■□□□□ 0.35
SEMA3B-214ENST00000619119 CDK5RAP2Q96SN8 1893 aa17.27■□□□□ 0.35
SEMA3B-214ENST00000619119 NRXN2Q9P2S2 1712 aa17.27■□□□□ 0.35
SEMA3B-214ENST00000619119 PARP1P09874 1014 aaKnown RBP17.26■□□□□ 0.35
SEMA3B-214ENST00000619119 ANKS1AQ92625 1134 aa17.26■□□□□ 0.35
SEMA3B-214ENST00000619119 NAF1Q96HR8 494 aaKnown RBP17.26■□□□□ 0.35
SEMA3B-214ENST00000619119 MLXIPQ9HAP2 919 aa17.26■□□□□ 0.35
SEMA3B-214ENST00000619119 ADAMTSL1Q8N6G6 1762 aa17.26■□□□□ 0.35
SEMA3B-214ENST00000619119 PAFAH1B1P43034 410 aa17.26■□□□□ 0.35
SEMA3B-214ENST00000619119 DPYDQ12882 1025 aa17.26■□□□□ 0.35
SEMA3B-214ENST00000619119 TRIM14Q14142 442 aa17.26■□□□□ 0.35
SEMA3B-214ENST00000619119 CCDC178Q5BJE1 867 aa17.26■□□□□ 0.35
SEMA3B-214ENST00000619119 CD302Q8IX05 232 aa17.26■□□□□ 0.35
SEMA3B-214ENST00000619119 RUBCNQ92622 972 aa17.26■□□□□ 0.35
SEMA3B-214ENST00000619119 GGT7Q9UJ14 662 aa17.26■□□□□ 0.35
SEMA3B-214ENST00000619119 SUGT1Q9Y2Z0 365 aa17.26■□□□□ 0.35
SEMA3B-214ENST00000619119 MYH1P12882 1939 aa17.26■□□□□ 0.35
SEMA3B-214ENST00000619119 DRD4P21917 467 aa17.26■□□□□ 0.35
SEMA3B-214ENST00000619119 CCDC96Q2M329 555 aa17.26■□□□□ 0.35
SEMA3B-214ENST00000619119 SHROOM1Q2M3G4 852 aaPredicted RBP17.26■□□□□ 0.35
SEMA3B-214ENST00000619119 KIF2BQ8N4N8 673 aa17.26■□□□□ 0.35
SEMA3B-214ENST00000619119 TNFRSF25Q93038 417 aa17.26■□□□□ 0.35
SEMA3B-214ENST00000619119 DLEC1Q9Y238 1755 aa17.26■□□□□ 0.35
SEMA3B-214ENST00000619119 DDX60LQ5H9U9 1706 aaKnown RBP17.25■□□□□ 0.35
SEMA3B-214ENST00000619119 KIF5AQ12840 1032 aa17.25■□□□□ 0.35
SEMA3B-214ENST00000619119 PTGDRQ13258 359 aa17.25■□□□□ 0.35
SEMA3B-214ENST00000619119 GPIHBP1Q8IV16 184 aa17.25■□□□□ 0.35
SEMA3B-214ENST00000619119 MS4A14Q96JA4 679 aa17.25■□□□□ 0.35
SEMA3B-214ENST00000619119 MMADHCQ9H3L0 296 aaPredicted RBP17.25■□□□□ 0.35
SEMA3B-214ENST00000619119 AGAP1Q9UPQ3 857 aa17.25■□□□□ 0.35
SEMA3B-214ENST00000619119 SRPRBQ9Y5M8 271 aaKnown RBP17.25■□□□□ 0.35
SEMA3B-214ENST00000619119 PALM3A6NDB9 673 aaPredicted RBP17.25■□□□□ 0.35
SEMA3B-214ENST00000619119 MYL1P05976 194 aa17.25■□□□□ 0.35
SEMA3B-214ENST00000619119 GNAQP50148 359 aa17.25■□□□□ 0.35
SEMA3B-214ENST00000619119 HLTFQ14527 1009 aaKnown RBP eCLIP17.25■□□□□ 0.35
SEMA3B-214ENST00000619119 CHADLQ6NUI6 762 aa17.25■□□□□ 0.35
SEMA3B-214ENST00000619119 WDR59Q6PJI9 974 aa17.25■□□□□ 0.35
SEMA3B-214ENST00000619119 BLIDQ8IZY5 108 aa17.25■□□□□ 0.35
SEMA3B-214ENST00000619119 STAMQ92783 540 aa17.25■□□□□ 0.35
SEMA3B-214ENST00000619119 UBE2OQ9C0C9 1292 aaKnown RBP17.25■□□□□ 0.35
SEMA3B-214ENST00000619119 NOVA2Q9UNW9 492 aaKnown RBP17.25■□□□□ 0.35
SEMA3B-214ENST00000619119 SRCAPQ6ZRS2 3230 aa17.25■□□□□ 0.35
SEMA3B-214ENST00000619119 TNS1Q9HBL0 1735 aaKnown RBP17.25■□□□□ 0.35
SEMA3B-214ENST00000619119 MOCS3O95396 460 aa17.24■□□□□ 0.35
SEMA3B-214ENST00000619119 CCND1P24385 295 aa17.24■□□□□ 0.35
SEMA3B-214ENST00000619119 PCK1P35558 622 aa17.24■□□□□ 0.35
SEMA3B-214ENST00000619119 DACT2Q5SW24 774 aa17.24■□□□□ 0.35
SEMA3B-214ENST00000619119 RBM12BQ8IXT5 1001 aaKnown RBP17.24■□□□□ 0.35
SEMA3B-214ENST00000619119 MDM1Q8TC05 714 aa17.24■□□□□ 0.35
SEMA3B-214ENST00000619119 GPCPD1Q9NPB8 672 aa17.24■□□□□ 0.35
SEMA3B-214ENST00000619119 LRWD1Q9UFC0 647 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms