RNA–Protein interactions for RNA: ENST00000618538.1

SEC22B-202, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

TSL 3

Gene SEC22B, Length 2,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-202ENST00000618538 TLL1O43897 1013 aa4.77□□□□□ -1.65
SEC22B-202ENST00000618538 RPS6KA5O75582 802 aa4.77□□□□□ -1.65
SEC22B-202ENST00000618538 FAM228BP0C875 321 aa4.77□□□□□ -1.65
SEC22B-202ENST00000618538 ZBTB48P10074 688 aaPredicted RBP4.77□□□□□ -1.65
SEC22B-202ENST00000618538 SNRPBP14678 240 aaKnown RBP4.77□□□□□ -1.65
SEC22B-202ENST00000618538 CYP11B2P19099 503 aa4.77□□□□□ -1.65
SEC22B-202ENST00000618538 KLRC1P26715 233 aa4.77□□□□□ -1.65
SEC22B-202ENST00000618538 TNNT3P45378 269 aaPredicted RBP4.77□□□□□ -1.65
SEC22B-202ENST00000618538 AMPD3Q01432 767 aa4.77□□□□□ -1.65
SEC22B-202ENST00000618538 RASSF7Q02833 373 aa4.77□□□□□ -1.65
SEC22B-202ENST00000618538 QRICH1Q2TAL8 776 aa4.77□□□□□ -1.65
SEC22B-202ENST00000618538 FAM26FQ5R3K3 315 aa4.77□□□□□ -1.65
SEC22B-202ENST00000618538 ZNF713Q8N859 430 aaPredicted RBP4.77□□□□□ -1.65
SEC22B-202ENST00000618538 EHBP1Q8NDI1 1231 aa4.77□□□□□ -1.65
SEC22B-202ENST00000618538 TRIM58Q8NG06 486 aa4.77□□□□□ -1.65
SEC22B-202ENST00000618538 GOLGA5Q8TBA6 731 aa4.77□□□□□ -1.65
SEC22B-202ENST00000618538 GOLPH3Q9H4A6 298 aa4.77□□□□□ -1.65
SEC22B-202ENST00000618538 ZNF287Q9HBT7 754 aa4.77□□□□□ -1.65
SEC22B-202ENST00000618538 POLD4Q9HCU8 107 aa4.77□□□□□ -1.65
SEC22B-202ENST00000618538 ZNHIT6Q9NWK9 470 aaKnown RBP4.77□□□□□ -1.65
SEC22B-202ENST00000618538 FEZ2Q9UHY8 353 aaPredicted RBP4.77□□□□□ -1.65
SEC22B-202ENST00000618538 USP21Q9UK80 565 aa4.77□□□□□ -1.65
SEC22B-202ENST00000618538 PACSIN2Q9UNF0 486 aaPredicted RBP4.77□□□□□ -1.65
SEC22B-202ENST00000618538 JRKLQ9Y4A0 524 aa4.77□□□□□ -1.65
SEC22B-202ENST00000618538 COL4A3BPQ9Y5P4 624 aa4.77□□□□□ -1.65
SEC22B-202ENST00000618538 GRIN2DO15399 1336 aa4.76□□□□□ -1.65
SEC22B-202ENST00000618538 ESYT3A0FGR9 886 aa4.76□□□□□ -1.65
SEC22B-202ENST00000618538 FRMD3A2A2Y4 597 aa4.76□□□□□ -1.65
SEC22B-202ENST00000618538 DDTLA6NHG4 134 aaPredicted RBP4.76□□□□□ -1.65
SEC22B-202ENST00000618538 ANKRD65E5RJM6 399 aa4.76□□□□□ -1.65
SEC22B-202ENST00000618538 C6orf229H3BNL8 230 aa4.76□□□□□ -1.65
SEC22B-202ENST00000618538 ZBTB5O15062 677 aa4.76□□□□□ -1.65
SEC22B-202ENST00000618538 EIF3JO75822 258 aaKnown RBP4.76□□□□□ -1.65
SEC22B-202ENST00000618538 TTLL1O95922 423 aa4.76□□□□□ -1.65
SEC22B-202ENST00000618538 FTCDO95954 541 aa4.76□□□□□ -1.65
SEC22B-202ENST00000618538 GLI1P08151 1106 aa4.76□□□□□ -1.65
SEC22B-202ENST00000618538 FAM153BP0C7A2 387 aa4.76□□□□□ -1.65
SEC22B-202ENST00000618538 SPATA31C1P0DKV0 1188 aa4.76□□□□□ -1.65
SEC22B-202ENST00000618538 ACTN1P12814 892 aa4.76□□□□□ -1.65
SEC22B-202ENST00000618538 GMPRP36959 345 aa4.76□□□□□ -1.65
SEC22B-202ENST00000618538 PPP1R2P41236 205 aa4.76□□□□□ -1.65
SEC22B-202ENST00000618538 MATR3P43243 847 aaKnown RBP eCLIP4.76□□□□□ -1.65
SEC22B-202ENST00000618538 SLC12A3P55017 1021 aa4.76□□□□□ -1.65
SEC22B-202ENST00000618538 MARSP56192 900 aaKnown RBP4.76□□□□□ -1.65
SEC22B-202ENST00000618538 POLR2FP61218 127 aaKnown RBP4.76□□□□□ -1.65
SEC22B-202ENST00000618538 TUBB4BP68371 445 aa4.76□□□□□ -1.65
SEC22B-202ENST00000618538 ITIH3Q06033 890 aa4.76□□□□□ -1.65
SEC22B-202ENST00000618538 CKAP4Q07065 602 aaKnown RBP4.76□□□□□ -1.65
SEC22B-202ENST00000618538 KCNA1Q09470 495 aa4.76□□□□□ -1.65
SEC22B-202ENST00000618538 RRP1BQ14684 758 aaKnown RBP4.76□□□□□ -1.65
SEC22B-202ENST00000618538 SPA17Q15506 151 aa4.76□□□□□ -1.65
SEC22B-202ENST00000618538 FAM153CQ494X1 144 aa4.76□□□□□ -1.65
SEC22B-202ENST00000618538 FAM83BQ5T0W9 1011 aa4.76□□□□□ -1.65
SEC22B-202ENST00000618538 KRT79Q5XKE5 535 aa4.76□□□□□ -1.65
SEC22B-202ENST00000618538 FOXR2Q6PJQ5 311 aa4.76□□□□□ -1.65
SEC22B-202ENST00000618538 GPBP1Q86WP2 473 aa4.76□□□□□ -1.65
SEC22B-202ENST00000618538 CERS3Q8IU89 383 aa4.76□□□□□ -1.65
SEC22B-202ENST00000618538 MYOCDQ8IZQ8 938 aa4.76□□□□□ -1.65
SEC22B-202ENST00000618538 ETNPPLQ8TBG4 499 aa4.76□□□□□ -1.65
SEC22B-202ENST00000618538 RBM46Q8TBY0 533 aaKnown RBP4.76□□□□□ -1.65
SEC22B-202ENST00000618538 CAGE1Q8TC20 777 aa4.76□□□□□ -1.65
SEC22B-202ENST00000618538 KCNV2Q8TDN2 545 aa4.76□□□□□ -1.65
SEC22B-202ENST00000618538 CCDC47Q96A33 483 aaKnown RBP4.76□□□□□ -1.65
SEC22B-202ENST00000618538 CDK5RAP3Q96JB5 506 aa4.76□□□□□ -1.65
SEC22B-202ENST00000618538 MBOAT7Q96N66 472 aa4.76□□□□□ -1.65
SEC22B-202ENST00000618538 INPP4AQ96PE3 977 aaPredicted RBP4.76□□□□□ -1.65
SEC22B-202ENST00000618538 LSM14BQ9BX40 385 aaKnown RBP4.76□□□□□ -1.65
SEC22B-202ENST00000618538 GBP3Q9H0R5 595 aa4.76□□□□□ -1.65
SEC22B-202ENST00000618538 MED4Q9NPJ6 270 aa4.76□□□□□ -1.65
SEC22B-202ENST00000618538 PANK4Q9NVE7 773 aa4.76□□□□□ -1.65
SEC22B-202ENST00000618538 FAM153AQ9UHL3 310 aa4.76□□□□□ -1.65
SEC22B-202ENST00000618538 SERPINB13Q9UIV8 391 aa4.76□□□□□ -1.65
SEC22B-202ENST00000618538 NENFQ9UMX5 172 aa4.76□□□□□ -1.65
SEC22B-202ENST00000618538 KIAA1024Q9UPX6 916 aa4.76□□□□□ -1.65
SEC22B-202ENST00000618538 SSU72P8A0A1W2PR75 194 aa4.76□□□□□ -1.65
SEC22B-202ENST00000618538 GRID2IPA4D2P6 1211 aa4.76□□□□□ -1.65
SEC22B-202ENST00000618538 RSPH10B2B2RC85 870 aa4.76□□□□□ -1.65
SEC22B-202ENST00000618538 FAM86B1E9PN63 330 aa4.76□□□□□ -1.65
SEC22B-202ENST00000618538 TRAF5O00463 557 aa4.76□□□□□ -1.65
SEC22B-202ENST00000618538 MEIS1O00470 390 aa4.76□□□□□ -1.65
SEC22B-202ENST00000618538 AKR1B10O60218 316 aa4.76□□□□□ -1.65
SEC22B-202ENST00000618538 SHOX2O60902 331 aaPredicted RBP4.76□□□□□ -1.65
SEC22B-202ENST00000618538 TACC1O75410 805 aa4.76□□□□□ -1.65
SEC22B-202ENST00000618538 PALMO75781 387 aa4.76□□□□□ -1.65
SEC22B-202ENST00000618538 SSBP05455 408 aaKnown RBP eCLIP4.76□□□□□ -1.65
SEC22B-202ENST00000618538 FAM86B2P0C5J1 330 aa4.76□□□□□ -1.65
SEC22B-202ENST00000618538 PLA2G4BP0C869 781 aa4.76□□□□□ -1.65
SEC22B-202ENST00000618538 RSPH10BP0C881 870 aa4.76□□□□□ -1.65
SEC22B-202ENST00000618538 PRLRP16471 622 aa4.76□□□□□ -1.65
SEC22B-202ENST00000618538 MAGEA1P43355 309 aa4.76□□□□□ -1.65
SEC22B-202ENST00000618538 DNA2P51530 1060 aa4.76□□□□□ -1.65
SEC22B-202ENST00000618538 TMEM266Q2M3C6 531 aa4.76□□□□□ -1.65
SEC22B-202ENST00000618538 TTMPQ5BVD1 217 aa4.76□□□□□ -1.65
SEC22B-202ENST00000618538 XP32Q5T750 250 aa4.76□□□□□ -1.65
SEC22B-202ENST00000618538 SND1Q7KZF4 910 aaKnown RBP eCLIP4.76□□□□□ -1.65
SEC22B-202ENST00000618538 EPM2AIP1Q7L775 607 aaPredicted RBP4.76□□□□□ -1.65
SEC22B-202ENST00000618538 SRLQ86TD4 932 aa4.76□□□□□ -1.65
SEC22B-202ENST00000618538 CATSPER3Q86XQ3 398 aa4.76□□□□□ -1.65
SEC22B-202ENST00000618538 FAM133AQ8N9E0 248 aa4.76□□□□□ -1.65
SEC22B-202ENST00000618538 CYP2W1Q8TAV3 490 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms