RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 IER5Q5VY09 327 aa5.33□□□□□ -1.56
SNCA-213ENST00000618500 FAM117BQ6P1L5 589 aa5.33□□□□□ -1.56
SNCA-213ENST00000618500 PPFIBP1Q86W92 1011 aa5.33□□□□□ -1.56
SNCA-213ENST00000618500 SUMF1Q8NBK3 374 aa5.33□□□□□ -1.56
SNCA-213ENST00000618500 CDHR1Q96JP9 859 aa5.33□□□□□ -1.56
SNCA-213ENST00000618500 CNTNAP3BQ96NU0 1288 aa5.33□□□□□ -1.56
SNCA-213ENST00000618500 CNTNAP3Q9BZ76 1288 aa5.33□□□□□ -1.56
SNCA-213ENST00000618500 RNF41Q9H4P4 317 aaPredicted RBP5.33□□□□□ -1.56
SNCA-213ENST00000618500 STX8Q9UNK0 236 aa5.33□□□□□ -1.56
SNCA-213ENST00000618500 PCDHGA2Q9Y5H1 932 aa5.33□□□□□ -1.56
SNCA-213ENST00000618500 PRDM1O75626 825 aa5.32□□□□□ -1.56
SNCA-213ENST00000618500 FGF18O76093 207 aa5.32□□□□□ -1.56
SNCA-213ENST00000618500 PDGFBP01127 241 aaPredicted RBP5.32□□□□□ -1.56
SNCA-213ENST00000618500 ADRB1P08588 477 aa5.32□□□□□ -1.56
SNCA-213ENST00000618500 SNAP25P60880 206 aa5.32□□□□□ -1.56
SNCA-213ENST00000618500 TBC1D8BQ0IIM8 1120 aa5.32□□□□□ -1.56
SNCA-213ENST00000618500 TDGQ13569 410 aa5.32□□□□□ -1.56
SNCA-213ENST00000618500 DSC3Q14574 896 aa5.32□□□□□ -1.56
SNCA-213ENST00000618500 PCNX4Q63HM2 1172 aa5.32□□□□□ -1.56
SNCA-213ENST00000618500 CES5AQ6NT32 575 aa5.32□□□□□ -1.56
SNCA-213ENST00000618500 C15orf39Q6ZRI6 1047 aa5.32□□□□□ -1.56
SNCA-213ENST00000618500 GPRASP2Q96D09 838 aa5.32□□□□□ -1.56
SNCA-213ENST00000618500 DDX23Q9BUQ8 820 aaKnown RBP5.32□□□□□ -1.56
SNCA-213ENST00000618500 AMNQ9BXJ7 453 aa5.32□□□□□ -1.56
SNCA-213ENST00000618500 IGFLR1Q9H665 355 aa5.32□□□□□ -1.56
SNCA-213ENST00000618500 TMEM161AQ9NX61 479 aa5.32□□□□□ -1.56
SNCA-213ENST00000618500 DAXXQ9UER7 740 aaPredicted RBP5.32□□□□□ -1.56
SNCA-213ENST00000618500 ZFP37Q9Y6Q3 630 aaPredicted RBP5.32□□□□□ -1.56
SNCA-213ENST00000618500 NFASCO94856 1347 aa5.32□□□□□ -1.56
SNCA-213ENST00000618500 MYH15Q9Y2K3 1946 aa5.32□□□□□ -1.56
SNCA-213ENST00000618500 TBC1D4O60343 1298 aa5.32□□□□□ -1.56
SNCA-213ENST00000618500 CLASP2O75122 1294 aaKnown RBP5.32□□□□□ -1.56
SNCA-213ENST00000618500 KRT37O76014 449 aa5.32□□□□□ -1.56
SNCA-213ENST00000618500 SMARCA1P28370 1054 aa5.32□□□□□ -1.56
SNCA-213ENST00000618500 SLC16A2P36021 539 aa5.32□□□□□ -1.56
SNCA-213ENST00000618500 TECP42680 631 aa5.32□□□□□ -1.56
SNCA-213ENST00000618500 SLC26A2P50443 739 aa5.32□□□□□ -1.56
SNCA-213ENST00000618500 SP2Q02086 613 aa5.32□□□□□ -1.56
SNCA-213ENST00000618500 SEMA3FQ13275 785 aa5.32□□□□□ -1.56
SNCA-213ENST00000618500 NONOQ15233 471 aaKnown RBP eCLIP5.32□□□□□ -1.56
SNCA-213ENST00000618500 MARCH8Q5T0T0 291 aa5.32□□□□□ -1.56
SNCA-213ENST00000618500 OTOP3Q7RTS5 596 aa5.32□□□□□ -1.56
SNCA-213ENST00000618500 RTN4RL1Q86UN2 441 aaPredicted RBP5.32□□□□□ -1.56
SNCA-213ENST00000618500 ADGRF4Q8IZF3 695 aa5.32□□□□□ -1.56
SNCA-213ENST00000618500 TRAIPQ9BWF2 469 aa5.32□□□□□ -1.56
SNCA-213ENST00000618500 FAM126AQ9BYI3 521 aaPredicted RBP5.32□□□□□ -1.56
SNCA-213ENST00000618500 TMEM117Q9H0C3 514 aa5.32□□□□□ -1.56
SNCA-213ENST00000618500 POMKQ9H5K3 350 aa5.32□□□□□ -1.56
SNCA-213ENST00000618500 SFXN1Q9H9B4 322 aa5.32□□□□□ -1.56
SNCA-213ENST00000618500 CYP26B1Q9NR63 512 aa5.32□□□□□ -1.56
SNCA-213ENST00000618500 METRNQ9UJH8 293 aa5.32□□□□□ -1.56
SNCA-213ENST00000618500 CDY2AQ9Y6F7 541 aa5.32□□□□□ -1.56
SNCA-213ENST00000618500 ZNF316A6NFI3 1004 aaPredicted RBP5.31□□□□□ -1.56
SNCA-213ENST00000618500 C9IYK1 514 aa5.31□□□□□ -1.56
SNCA-213ENST00000618500 MAFGO15525 162 aa5.31□□□□□ -1.56
SNCA-213ENST00000618500 SP9P0CG40 484 aa5.31□□□□□ -1.56
SNCA-213ENST00000618500 LIMK1P53667 647 aa5.31□□□□□ -1.56
SNCA-213ENST00000618500 QRICH1Q2TAL8 776 aa5.31□□□□□ -1.56
SNCA-213ENST00000618500 RUFY4Q6ZNE9 571 aa5.31□□□□□ -1.56
SNCA-213ENST00000618500 PLPPR4Q7Z2D5 763 aa5.31□□□□□ -1.56
SNCA-213ENST00000618500 PI4K2BQ8TCG2 481 aa5.31□□□□□ -1.56
SNCA-213ENST00000618500 DDX1Q92499 740 aaKnown RBP5.31□□□□□ -1.56
SNCA-213ENST00000618500 FRAT1Q92837 279 aaPredicted RBP5.31□□□□□ -1.56
SNCA-213ENST00000618500 FAM212AQ96EL1 285 aa5.31□□□□□ -1.56
SNCA-213ENST00000618500 RPGRIP1Q96KN7 1286 aa5.31□□□□□ -1.56
SNCA-213ENST00000618500 MAP3K14Q99558 947 aa5.31□□□□□ -1.56
SNCA-213ENST00000618500 OSBPL7Q9BZF2 842 aa5.31□□□□□ -1.56
SNCA-213ENST00000618500 TMX1Q9H3N1 280 aa5.31□□□□□ -1.56
SNCA-213ENST00000618500 PRMT8Q9NR22 394 aaPredicted RBP5.31□□□□□ -1.56
SNCA-213ENST00000618500 ERAP1Q9NZ08 941 aa5.31□□□□□ -1.56
SNCA-213ENST00000618500 KIF26AQ9ULI4 1882 aaPredicted RBP5.31□□□□□ -1.56
SNCA-213ENST00000618500 FRMPD2Q68DX3 1309 aaPredicted RBP5.31□□□□□ -1.56
SNCA-213ENST00000618500 TMEM8BA6NDV4 472 aa5.31□□□□□ -1.56
SNCA-213ENST00000618500 STK25O00506 426 aa5.31□□□□□ -1.56
SNCA-213ENST00000618500 CHGBP05060 677 aa5.31□□□□□ -1.56
SNCA-213ENST00000618500 STARD6P59095 220 aa5.31□□□□□ -1.56
SNCA-213ENST00000618500 ARHGAP4P98171 946 aa5.31□□□□□ -1.56
SNCA-213ENST00000618500 NBR1Q14596 966 aa5.31□□□□□ -1.56
SNCA-213ENST00000618500 GRIK4Q16099 956 aa5.31□□□□□ -1.56
SNCA-213ENST00000618500 GPR149Q86SP6 731 aa5.31□□□□□ -1.56
SNCA-213ENST00000618500 LRRC43Q8N309 656 aa5.31□□□□□ -1.56
SNCA-213ENST00000618500 SECISBP2LQ93073 1101 aaKnown RBP5.31□□□□□ -1.56
SNCA-213ENST00000618500 SMARCAD1Q9H4L7 1026 aa5.31□□□□□ -1.56
SNCA-213ENST00000618500 JMJD4Q9H9V9 463 aa5.31□□□□□ -1.56
SNCA-213ENST00000618500 MLXIPQ9HAP2 919 aa5.31□□□□□ -1.56
SNCA-213ENST00000618500 GPCPD1Q9NPB8 672 aa5.31□□□□□ -1.56
SNCA-213ENST00000618500 PUF60Q9UHX1 559 aaKnown RBP5.31□□□□□ -1.56
SNCA-213ENST00000618500 C2orf71A6NGG8 1288 aa5.31□□□□□ -1.56
SNCA-213ENST00000618500 RIOK3O14730 519 aaKnown RBP5.31□□□□□ -1.56
SNCA-213ENST00000618500 NMT2O60551 498 aa5.31□□□□□ -1.56
SNCA-213ENST00000618500 UPP2O95045 317 aa5.31□□□□□ -1.56
SNCA-213ENST00000618500 SRFP11831 508 aa5.31□□□□□ -1.56
SNCA-213ENST00000618500 PAK2Q13177 524 aa5.31□□□□□ -1.56
SNCA-213ENST00000618500 BMS1Q14692 1282 aaKnown RBP5.31□□□□□ -1.56
SNCA-213ENST00000618500 RSPO4Q2I0M5 234 aaPredicted RBP5.31□□□□□ -1.56
SNCA-213ENST00000618500 SLC24A5Q71RS6 500 aa5.31□□□□□ -1.56
SNCA-213ENST00000618500 SLC39A11Q8N1S5 342 aa5.31□□□□□ -1.56
SNCA-213ENST00000618500 MRPL43Q8N983 215 aaKnown RBP5.31□□□□□ -1.56
SNCA-213ENST00000618500 ACSF2Q96CM8 615 aaPredicted RBP5.31□□□□□ -1.56
SNCA-213ENST00000618500 MRPL9Q9BYD2 267 aaKnown RBP5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms