RNA–Protein interactions for RNA: ENST00000618464.1

SYNGR3-206, Transcript of synaptogyrin 3, humanhuman

TSL 1 (best) BASIC

Gene SYNGR3, Length 1,213 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-206ENST00000618464 CIITAP33076 1130 aa25.03■■□□□ 1.6
SYNGR3-206ENST00000618464 MGAT3Q09327 533 aa25.03■■□□□ 1.6
SYNGR3-206ENST00000618464 MKRN4PQ13434 485 aaPredicted RBP25.03■■□□□ 1.6
SYNGR3-206ENST00000618464 SKIV2LQ15477 1246 aaKnown RBP25.03■■□□□ 1.6
SYNGR3-206ENST00000618464 PDXDC2PQ6P474 469 aa25.03■■□□□ 1.6
SYNGR3-206ENST00000618464 TNPO1Q92973 898 aaKnown RBP25.03■■□□□ 1.6
SYNGR3-206ENST00000618464 RAD9AQ99638 391 aa25.03■■□□□ 1.6
SYNGR3-206ENST00000618464 IFIH1Q9BYX4 1025 aaKnown RBP25.03■■□□□ 1.6
SYNGR3-206ENST00000618464 ZNF302Q9NR11 478 aa25.03■■□□□ 1.6
SYNGR3-206ENST00000618464 TCEAL9Q9UHQ7 104 aa25.03■■□□□ 1.6
SYNGR3-206ENST00000618464 CDY2AQ9Y6F7 541 aa25.03■■□□□ 1.6
SYNGR3-206ENST00000618464 PRRC2BQ5JSZ5 2229 aaKnown RBP25.02■■□□□ 1.6
SYNGR3-206ENST00000618464 AK2P54819 239 aa25.02■■□□□ 1.6
SYNGR3-206ENST00000618464 GRB10Q13322 594 aa25.02■■□□□ 1.6
SYNGR3-206ENST00000618464 SWSAP1Q6NVH7 229 aa25.02■■□□□ 1.6
SYNGR3-206ENST00000618464 BLIDQ8IZY5 108 aa25.02■■□□□ 1.6
SYNGR3-206ENST00000618464 TBCKQ8TEA7 893 aa25.02■■□□□ 1.6
SYNGR3-206ENST00000618464 LENG9Q96B70 501 aa25.02■■□□□ 1.6
SYNGR3-206ENST00000618464 TBC1D22BQ9NU19 505 aa25.02■■□□□ 1.6
SYNGR3-206ENST00000618464 SIP14410 1827 aa25.02■■□□□ 1.6
SYNGR3-206ENST00000618464 PFKFB2O60825 505 aa25.01■■□□□ 1.59
SYNGR3-206ENST00000618464 CDKL5O76039 1030 aa25.01■■□□□ 1.59
SYNGR3-206ENST00000618464 MRPS6P82932 125 aaKnown RBP25.01■■□□□ 1.59
SYNGR3-206ENST00000618464 TMEM62Q0P6H9 643 aa25.01■■□□□ 1.59
SYNGR3-206ENST00000618464 ZNF746Q6NUN9 644 aaPredicted RBP25.01■■□□□ 1.59
SYNGR3-206ENST00000618464 TRMT1LQ7Z2T5 733 aaKnown RBP25.01■■□□□ 1.59
SYNGR3-206ENST00000618464 UHRF1Q96T88 793 aaPredicted RBP25.01■■□□□ 1.59
SYNGR3-206ENST00000618464 KCNJ14Q9UNX9 436 aa25.01■■□□□ 1.59
SYNGR3-206ENST00000618464 LPXNO60711 386 aa25■■□□□ 1.59
SYNGR3-206ENST00000618464 UPP2O95045 317 aa25■■□□□ 1.59
SYNGR3-206ENST00000618464 SEC24BO95487 1268 aa25■■□□□ 1.59
SYNGR3-206ENST00000618464 BMP1P13497 986 aa25■■□□□ 1.59
SYNGR3-206ENST00000618464 SLC26A2P50443 739 aa25■■□□□ 1.59
SYNGR3-206ENST00000618464 LPIN1Q14693 890 aa25■■□□□ 1.59
SYNGR3-206ENST00000618464 CKAP2LQ8IYA6 745 aa25■■□□□ 1.59
SYNGR3-206ENST00000618464 IL27Q8NEV9 243 aa25■■□□□ 1.59
SYNGR3-206ENST00000618464 ATP8B4Q8TF62 1192 aa25■■□□□ 1.59
SYNGR3-206ENST00000618464 APBB2Q92870 758 aa25■■□□□ 1.59
SYNGR3-206ENST00000618464 MTUS1Q9ULD2 1270 aa25■■□□□ 1.59
SYNGR3-206ENST00000618464 SAMM50Q9Y512 469 aa25■■□□□ 1.59
SYNGR3-206ENST00000618464 PCDHA2Q9Y5H9 948 aa25■■□□□ 1.59
SYNGR3-206ENST00000618464 LOC101059915A0A1B0GWI6 518 aaPredicted RBP24.99■■□□□ 1.59
SYNGR3-206ENST00000618464 MSH4O15457 936 aa24.99■■□□□ 1.59
SYNGR3-206ENST00000618464 HBP1O60381 514 aa24.99■■□□□ 1.59
SYNGR3-206ENST00000618464 USP11P51784 963 aa24.99■■□□□ 1.59
SYNGR3-206ENST00000618464 KCNQ1P51787 676 aa24.99■■□□□ 1.59
SYNGR3-206ENST00000618464 KRT76Q01546 638 aa24.99■■□□□ 1.59
SYNGR3-206ENST00000618464 ANKRD1Q15327 319 aa24.99■■□□□ 1.59
SYNGR3-206ENST00000618464 NPY5RQ15761 445 aa24.99■■□□□ 1.59
SYNGR3-206ENST00000618464 MTHFD1LQ6UB35 978 aa24.99■■□□□ 1.59
SYNGR3-206ENST00000618464 DAGLBQ8NCG7 672 aa24.99■■□□□ 1.59
SYNGR3-206ENST00000618464 GJA10Q969M2 543 aa24.99■■□□□ 1.59
SYNGR3-206ENST00000618464 NECAB3Q96P71 396 aaPredicted RBP24.99■■□□□ 1.59
SYNGR3-206ENST00000618464 TDP2O95551 362 aa24.98■■□□□ 1.59
SYNGR3-206ENST00000618464 PSAPP07602 524 aa24.98■■□□□ 1.59
SYNGR3-206ENST00000618464 FBXO47Q5MNV8 452 aa24.98■■□□□ 1.59
SYNGR3-206ENST00000618464 SMAP1Q8IYB5 467 aaPredicted RBP24.98■■□□□ 1.59
SYNGR3-206ENST00000618464 NECAB1Q8N987 351 aa24.98■■□□□ 1.59
SYNGR3-206ENST00000618464 C22orf23Q9BZE7 217 aa24.98■■□□□ 1.59
SYNGR3-206ENST00000618464 GJB4Q9NTQ9 266 aa24.98■■□□□ 1.59
SYNGR3-206ENST00000618464 GABBR1Q9UBS5 961 aa24.98■■□□□ 1.59
SYNGR3-206ENST00000618464 INSL6Q9Y581 213 aa24.98■■□□□ 1.59
SYNGR3-206ENST00000618464 TCF20Q9UGU0 1960 aaKnown RBP24.98■■□□□ 1.59
SYNGR3-206ENST00000618464 LINC01553A4QN01 128 aa24.97■■□□□ 1.59
SYNGR3-206ENST00000618464 M0QZ92 97 aa24.97■■□□□ 1.59
SYNGR3-206ENST00000618464 M0R2N6 131 aa24.97■■□□□ 1.59
SYNGR3-206ENST00000618464 CHMP2AO43633 222 aa24.97■■□□□ 1.59
SYNGR3-206ENST00000618464 GAS7O60861 476 aa24.97■■□□□ 1.59
SYNGR3-206ENST00000618464 CTDNEP1O95476 244 aa24.97■■□□□ 1.59
SYNGR3-206ENST00000618464 ATP4AP20648 1035 aa24.97■■□□□ 1.59
SYNGR3-206ENST00000618464 KLRC1P26715 233 aa24.97■■□□□ 1.59
SYNGR3-206ENST00000618464 IER5Q5VY09 327 aa24.97■■□□□ 1.59
SYNGR3-206ENST00000618464 GALNT17Q6IS24 598 aa24.97■■□□□ 1.59
SYNGR3-206ENST00000618464 GDPD5Q8WTR4 605 aa24.97■■□□□ 1.59
SYNGR3-206ENST00000618464 PCDHA10Q9Y5I2 948 aa24.97■■□□□ 1.59
SYNGR3-206ENST00000618464 TRPV2Q9Y5S1 764 aa24.97■■□□□ 1.59
SYNGR3-206ENST00000618464 COL4A4P53420 1690 aaPredicted RBP24.97■■□□□ 1.59
SYNGR3-206ENST00000618464 STK36Q9NRP7 1315 aa24.96■■□□□ 1.59
SYNGR3-206ENST00000618464 SMIM35A0A1B0GVV1 85 aa24.96■■□□□ 1.59
SYNGR3-206ENST00000618464 LARGE1O95461 756 aa24.96■■□□□ 1.59
SYNGR3-206ENST00000618464 RPLP2P05387 115 aaKnown RBP24.96■■□□□ 1.59
SYNGR3-206ENST00000618464 LRCH2Q5VUJ6 765 aa24.96■■□□□ 1.59
SYNGR3-206ENST00000618464 TSHZ1Q6ZSZ6 1077 aa24.96■■□□□ 1.59
SYNGR3-206ENST00000618464 YME1L1Q96TA2 773 aa24.96■■□□□ 1.59
SYNGR3-206ENST00000618464 AGO3Q9H9G7 860 aaKnown RBP24.96■■□□□ 1.59
SYNGR3-206ENST00000618464 MAFBQ9Y5Q3 323 aaPredicted RBP24.96■■□□□ 1.59
SYNGR3-206ENST00000618464 COL1A2P08123 1366 aa24.95■■□□□ 1.59
SYNGR3-206ENST00000618464 WDR64B1ANS9 1081 aa24.95■■□□□ 1.58
SYNGR3-206ENST00000618464 EIF5BO60841 1220 aaKnown RBP24.95■■□□□ 1.58
SYNGR3-206ENST00000618464 CD52P31358 61 aa24.95■■□□□ 1.58
SYNGR3-206ENST00000618464 NEK4P51957 841 aa24.95■■□□□ 1.58
SYNGR3-206ENST00000618464 NONOQ15233 471 aaKnown RBP eCLIP24.95■■□□□ 1.58
SYNGR3-206ENST00000618464 ME3Q16798 604 aa24.95■■□□□ 1.58
SYNGR3-206ENST00000618464 INF2Q27J81 1249 aa24.95■■□□□ 1.58
SYNGR3-206ENST00000618464 AAK1Q2M2I8 961 aa24.95■■□□□ 1.58
SYNGR3-206ENST00000618464 ZNF484Q5JVG2 852 aa24.95■■□□□ 1.58
SYNGR3-206ENST00000618464 KRT25Q7Z3Z0 450 aa24.95■■□□□ 1.58
SYNGR3-206ENST00000618464 FAM177A1Q8N128 213 aaPredicted RBP24.95■■□□□ 1.58
SYNGR3-206ENST00000618464 SLC5A5Q92911 643 aa24.95■■□□□ 1.58
SYNGR3-206ENST00000618464 TOP1MTQ969P6 601 aa24.95■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms