RNA–Protein interactions for RNA: ENST00000618327.4

CIITA-213, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CIITA, Length 4,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-213ENST00000618327 SMIM22K7EJ46 135 aa15.11■□□□□ 0.01
CIITA-213ENST00000618327 ARID5BQ14865 1188 aa15.11■□□□□ 0.01
CIITA-213ENST00000618327 TTC31Q49AM3 519 aaPredicted RBP15.11■□□□□ 0.01
CIITA-213ENST00000618327 C9orf131Q5VYM1 1079 aa15.11■□□□□ 0.01
CIITA-213ENST00000618327 POTEAQ6S8J7 498 aa15.11■□□□□ 0.01
CIITA-213ENST00000618327 ANKRD13AQ8IZ07 590 aa15.11■□□□□ 0.01
CIITA-213ENST00000618327 NLRP7Q8WX94 980 aa15.11■□□□□ 0.01
CIITA-213ENST00000618327 NLRP4Q96MN2 994 aa15.11■□□□□ 0.01
CIITA-213ENST00000618327 ACTN4O43707 911 aaKnown RBP15.11■□□□□ 0.01
CIITA-213ENST00000618327 MFAP3LO75121 409 aa15.11■□□□□ 0.01
CIITA-213ENST00000618327 LRRN2O75325 713 aa15.11■□□□□ 0.01
CIITA-213ENST00000618327 BPIFB4P59827 614 aa15.11■□□□□ 0.01
CIITA-213ENST00000618327 TCP11Q8WWU5 503 aa15.11■□□□□ 0.01
CIITA-213ENST00000618327 ST7Q9NRC1 585 aa15.11■□□□□ 0.01
CIITA-213ENST00000618327 SLC9A2Q9UBY0 812 aa15.11■□□□□ 0.01
CIITA-213ENST00000618327 ARHGEF6Q15052 776 aa15.11■□□□□ 0.01
CIITA-213ENST00000618327 NBPF12Q5TAG4 269 aaPredicted RBP15.11■□□□□ 0.01
CIITA-213ENST00000618327 FAM133AQ8N9E0 248 aa15.11■□□□□ 0.01
CIITA-213ENST00000618327 RASSF4Q9H2L5 321 aa15.11■□□□□ 0.01
CIITA-213ENST00000618327 ADARB2Q9NS39 739 aaKnown RBP15.11■□□□□ 0.01
CIITA-213ENST00000618327 TYW1Q9NV66 732 aaKnown RBP15.11■□□□□ 0.01
CIITA-213ENST00000618327 SLC16A4O15374 487 aa15.11■□□□□ 0.01
CIITA-213ENST00000618327 FXR2P51116 673 aaKnown RBP eCLIP15.11■□□□□ 0.01
CIITA-213ENST00000618327 ZFPM1Q8IX07 1006 aa15.11■□□□□ 0.01
CIITA-213ENST00000618327 C7orf25Q9BPX7 421 aa15.11■□□□□ 0.01
CIITA-213ENST00000618327 JPH1Q9HDC5 661 aaPredicted RBP15.11■□□□□ 0.01
CIITA-213ENST00000618327 ATF7P17544 494 aaPredicted RBP15.1■□□□□ 0.01
CIITA-213ENST00000618327 SNAPC2Q13487 334 aa15.1■□□□□ 0.01
CIITA-213ENST00000618327 IQCB1Q15051 598 aa15.1■□□□□ 0.01
CIITA-213ENST00000618327 SLFN12LQ6IEE8 588 aa15.1■□□□□ 0.01
CIITA-213ENST00000618327 INTS8Q75QN2 995 aaKnown RBP15.1■□□□□ 0.01
CIITA-213ENST00000618327 ZBTB33Q86T24 672 aa15.1■□□□□ 0.01
CIITA-213ENST00000618327 RSPH3Q86UC2 560 aa15.1■□□□□ 0.01
CIITA-213ENST00000618327 PDLIM2Q96JY6 352 aa15.1■□□□□ 0.01
CIITA-213ENST00000618327 VPS18Q9P253 973 aa15.1■□□□□ 0.01
CIITA-213ENST00000618327 IKBKGQ9Y6K9 419 aa15.1■□□□□ 0.01
CIITA-213ENST00000618327 ZNF233A6NK53 670 aa15.1■□□□□ 0.01
CIITA-213ENST00000618327 TERF1P54274 439 aa15.1■□□□□ 0.01
CIITA-213ENST00000618327 WHAMMP3Q1A5X7 153 aa15.1■□□□□ 0.01
CIITA-213ENST00000618327 SPATA24Q86W54 205 aa15.1■□□□□ 0.01
CIITA-213ENST00000618327 ANKRD36BP1Q96IX9 119 aa15.1■□□□□ 0.01
CIITA-213ENST00000618327 CCDC77Q9BR77 488 aa15.1■□□□□ 0.01
CIITA-213ENST00000618327 ICAM1P05362 532 aa15.1■□□□□ 0.01
CIITA-213ENST00000618327 INPP5BP32019 993 aa15.1■□□□□ 0.01
CIITA-213ENST00000618327 LACTBP83111 547 aaPredicted RBP15.1■□□□□ 0.01
CIITA-213ENST00000618327 TAF12Q16514 161 aa15.1■□□□□ 0.01
CIITA-213ENST00000618327 ZNF354CQ86Y25 554 aa15.1■□□□□ 0.01
CIITA-213ENST00000618327 CCDC170Q8IYT3 715 aa15.1■□□□□ 0.01
CIITA-213ENST00000618327 HYOU1Q9Y4L1 999 aa15.1■□□□□ 0.01
CIITA-213ENST00000618327 TFAMQ00059 246 aaKnown RBP15.1■□□□□ 0.01
CIITA-213ENST00000618327 PNMA8AQ86V59 439 aaPredicted RBP15.1■□□□□ 0.01
CIITA-213ENST00000618327 XXYLT1Q8NBI6 393 aa15.1■□□□□ 0.01
CIITA-213ENST00000618327 MSTO1Q9BUK6 570 aa15.1■□□□□ 0.01
CIITA-213ENST00000618327 APOL6Q9BWW8 343 aa15.1■□□□□ 0.01
CIITA-213ENST00000618327 NSRP1Q9H0G5 558 aaKnown RBP15.1■□□□□ 0.01
CIITA-213ENST00000618327 BACE1P56817 501 aa15.09■□□□□ 0.01
CIITA-213ENST00000618327 KLHL7Q8IXQ5 586 aa15.09■□□□□ 0.01
CIITA-213ENST00000618327 ACRBPQ8NEB7 543 aa15.09■□□□□ 0.01
CIITA-213ENST00000618327 AKT1S1Q96B36 256 aa15.09■□□□□ 0.01
CIITA-213ENST00000618327 RPGRIP1Q96KN7 1286 aa15.09■□□□□ 0.01
CIITA-213ENST00000618327 PPP1R16BQ96T49 567 aa15.09■□□□□ 0.01
CIITA-213ENST00000618327 MXRA8Q9BRK3 442 aa15.09■□□□□ 0.01
CIITA-213ENST00000618327 UBE2TQ9NPD8 197 aaPredicted RBP15.09■□□□□ 0.01
CIITA-213ENST00000618327 ATRNO75882 1429 aa15.09■□□□□ 0.01
CIITA-213ENST00000618327 AK9Q5TCS8 1911 aa15.09■□□□□ 0.01
CIITA-213ENST00000618327 ASB14A6NK59 587 aa15.09■□□□□ 0.01
CIITA-213ENST00000618327 RHOBTB3O94955 611 aa15.09■□□□□ 0.01
CIITA-213ENST00000618327 EIF4A3P38919 411 aaKnown RBP15.09■□□□□ 0.01
CIITA-213ENST00000618327 Q3C1V9 767 aa15.09■□□□□ 0.01
CIITA-213ENST00000618327 FAM81BQ96LP2 452 aa15.09■□□□□ 0.01
CIITA-213ENST00000618327 NHEJ1Q9H9Q4 299 aaPredicted RBP15.09■□□□□ 0.01
CIITA-213ENST00000618327 KCNK3O14649 394 aa15.09■□□□□ 0.01
CIITA-213ENST00000618327 SLC26A4O43511 780 aa15.09■□□□□ 0.01
CIITA-213ENST00000618327 GFPT2O94808 682 aa15.09■□□□□ 0.01
CIITA-213ENST00000618327 NDUFA10O95299 355 aa15.09■□□□□ 0.01
CIITA-213ENST00000618327 VIL1P09327 827 aaKnown RBP15.09■□□□□ 0.01
CIITA-213ENST00000618327 RPS6P62753 249 aaKnown RBP15.09■□□□□ 0.01
CIITA-213ENST00000618327 CCDC121Q6ZUS5 278 aa15.09■□□□□ 0.01
CIITA-213ENST00000618327 CCDC25Q86WR0 208 aa15.09■□□□□ 0.01
CIITA-213ENST00000618327 ARFGAP2Q8N6H7 521 aa15.09■□□□□ 0.01
CIITA-213ENST00000618327 PPM1EQ8WY54 764 aa15.09■□□□□ 0.01
CIITA-213ENST00000618327 HPS3Q969F9 1004 aa15.09■□□□□ 0.01
CIITA-213ENST00000618327 PCDHB4Q9Y5E5 795 aa15.09■□□□□ 0.01
CIITA-213ENST00000618327 AFDNP55196 1824 aaKnown RBP15.09■□□□□ 0.01
CIITA-213ENST00000618327 BAZ2BQ9UIF8 2168 aaKnown RBP15.09■□□□□ 0.01
CIITA-213ENST00000618327 DENND3A2RUS2 1198 aa15.08■□□□□ 0.01
CIITA-213ENST00000618327 SLC37A4O43826 429 aa15.08■□□□□ 0.01
CIITA-213ENST00000618327 TCP1P17987 556 aaKnown RBP15.08■□□□□ 0.01
CIITA-213ENST00000618327 NSFP46459 744 aaKnown RBP15.08■□□□□ 0.01
CIITA-213ENST00000618327 OSTNP61366 133 aa15.08■□□□□ 0.01
CIITA-213ENST00000618327 CLUL1Q15846 466 aa15.08■□□□□ 0.01
CIITA-213ENST00000618327 FKBP1CQ5VVH2 108 aa15.08■□□□□ 0.01
CIITA-213ENST00000618327 RASGRP2Q7LDG7 609 aa15.08■□□□□ 0.01
CIITA-213ENST00000618327 MTRQ99707 1265 aa15.08■□□□□ 0.01
CIITA-213ENST00000618327 MYMKA6NI61 221 aa15.08■□□□□ 0
CIITA-213ENST00000618327 YWHABP31946 246 aaKnown RBP15.08■□□□□ 0
CIITA-213ENST00000618327 SESTD1Q86VW0 696 aa15.08■□□□□ 0
CIITA-213ENST00000618327 ADSSL1Q8N142 457 aa15.08■□□□□ 0
CIITA-213ENST00000618327 PHRF1Q9P1Y6 1649 aaKnown RBP15.08■□□□□ 0
CIITA-213ENST00000618327 RGPD2P0DJD1 1756 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms