RNA–Protein interactions for RNA: ENST00000617757.1

TARDBP-219, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 434 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-219ENST00000617757 MKRN4PQ13434 485 aaPredicted RBP9.01□□□□□ -0.97
TARDBP-219ENST00000617757 PNOCQ13519 176 aa9.01□□□□□ -0.97
TARDBP-219ENST00000617757 DHX8Q14562 1220 aaKnown RBP9.01□□□□□ -0.97
TARDBP-219ENST00000617757 POSTNQ15063 836 aa9.01□□□□□ -0.97
TARDBP-219ENST00000617757 ZSCAN23Q3MJ62 389 aa9.01□□□□□ -0.97
TARDBP-219ENST00000617757 MAP3K21Q5TCX8 1036 aa9.01□□□□□ -0.97
TARDBP-219ENST00000617757 FAM160B1Q5W0V3 765 aa9.01□□□□□ -0.97
TARDBP-219ENST00000617757 CKAP2LQ8IYA6 745 aa9.01□□□□□ -0.97
TARDBP-219ENST00000617757 SYT2Q8N9I0 419 aaPredicted RBP9.01□□□□□ -0.97
TARDBP-219ENST00000617757 SLAIN1Q8ND83 568 aa9.01□□□□□ -0.97
TARDBP-219ENST00000617757 PPTC7Q8NI37 304 aa9.01□□□□□ -0.97
TARDBP-219ENST00000617757 AFAP1L1Q8TED9 768 aa9.01□□□□□ -0.97
TARDBP-219ENST00000617757 PIGOQ8TEQ8 1089 aa9.01□□□□□ -0.97
TARDBP-219ENST00000617757 AFG1LQ8WV93 481 aa9.01□□□□□ -0.97
TARDBP-219ENST00000617757 ERCC4Q92889 916 aaPredicted RBP9.01□□□□□ -0.97
TARDBP-219ENST00000617757 C7orf25Q9BPX7 421 aa9.01□□□□□ -0.97
TARDBP-219ENST00000617757 GZF1Q9H116 711 aaPredicted RBP9.01□□□□□ -0.97
TARDBP-219ENST00000617757 DBR1Q9UK59 544 aaKnown RBP9.01□□□□□ -0.97
TARDBP-219ENST00000617757 Q9Y3F1 56 aa9.01□□□□□ -0.97
TARDBP-219ENST00000617757 MAFBQ9Y5Q3 323 aaPredicted RBP9.01□□□□□ -0.97
TARDBP-219ENST00000617757 PTCH2Q9Y6C5 1203 aa9.01□□□□□ -0.97
TARDBP-219ENST00000617757 EMSYQ7Z589 1322 aa9.01□□□□□ -0.97
TARDBP-219ENST00000617757 EVPLQ92817 2033 aa9□□□□□ -0.97
TARDBP-219ENST00000617757 SYCE3A1L190 88 aa9□□□□□ -0.97
TARDBP-219ENST00000617757 MYMKA6NI61 221 aa9□□□□□ -0.97
TARDBP-219ENST00000617757 SEPT4O43236 478 aa9□□□□□ -0.97
TARDBP-219ENST00000617757 GTPBP6O43824 516 aaPredicted RBP9□□□□□ -0.97
TARDBP-219ENST00000617757 DUSP11O75319 330 aaKnown RBP9□□□□□ -0.97
TARDBP-219ENST00000617757 MYL1P05976 194 aa9□□□□□ -0.97
TARDBP-219ENST00000617757 HSPA8P11142 646 aaKnown RBP9□□□□□ -0.97
TARDBP-219ENST00000617757 CASP1P29466 404 aa9□□□□□ -0.97
TARDBP-219ENST00000617757 CNGA1P29973 690 aa9□□□□□ -0.97
TARDBP-219ENST00000617757 CCND3P30281 292 aaPredicted RBP9□□□□□ -0.97
TARDBP-219ENST00000617757 YWHABP31946 246 aaKnown RBP9□□□□□ -0.97
TARDBP-219ENST00000617757 GRK4P32298 578 aa9□□□□□ -0.97
TARDBP-219ENST00000617757 STAT5BP51692 787 aa9□□□□□ -0.97
TARDBP-219ENST00000617757 SLC12A3P55017 1021 aa9□□□□□ -0.97
TARDBP-219ENST00000617757 AMPD3Q01432 767 aa9□□□□□ -0.97
TARDBP-219ENST00000617757 DPYDQ12882 1025 aa9□□□□□ -0.97
TARDBP-219ENST00000617757 CUL4BQ13620 913 aa9□□□□□ -0.97
TARDBP-219ENST00000617757 ARSHQ5FYA8 562 aa9□□□□□ -0.97
TARDBP-219ENST00000617757 UTP14CQ5TAP6 766 aaKnown RBP9□□□□□ -0.97
TARDBP-219ENST00000617757 ANO5Q75V66 913 aa9□□□□□ -0.97
TARDBP-219ENST00000617757 PLPPR4Q7Z2D5 763 aa9□□□□□ -0.97
TARDBP-219ENST00000617757 TLK2Q86UE8 772 aa9□□□□□ -0.97
TARDBP-219ENST00000617757 ATP6V0A1Q93050 837 aa9□□□□□ -0.97
TARDBP-219ENST00000617757 LENG1Q96BZ8 264 aaPredicted RBP9□□□□□ -0.97
TARDBP-219ENST00000617757 LRRC27Q9C0I9 530 aa9□□□□□ -0.97
TARDBP-219ENST00000617757 BLZF1Q9H2G9 400 aa9□□□□□ -0.97
TARDBP-219ENST00000617757 BHMT2Q9H2M3 363 aa9□□□□□ -0.97
TARDBP-219ENST00000617757 ANKEF1Q9NU02 776 aa9□□□□□ -0.97
TARDBP-219ENST00000617757 KIAA1468Q9P260 1216 aa9□□□□□ -0.97
TARDBP-219ENST00000617757 TUBE1Q9UJT0 475 aa9□□□□□ -0.97
TARDBP-219ENST00000617757 PTPN22Q9Y2R2 807 aa9□□□□□ -0.97
TARDBP-219ENST00000617757 PCDHA5Q9Y5H7 936 aa9□□□□□ -0.97
TARDBP-219ENST00000617757 TMEM150BA6NC51 233 aa8.99□□□□□ -0.97
TARDBP-219ENST00000617757 A6NJR5 290 aa8.99□□□□□ -0.97
TARDBP-219ENST00000617757 PITPNM1O00562 1244 aa8.99□□□□□ -0.97
TARDBP-219ENST00000617757 PPFIA4O75335 1185 aa8.99□□□□□ -0.97
TARDBP-219ENST00000617757 SMC2O95347 1197 aa8.99□□□□□ -0.97
TARDBP-219ENST00000617757 INHAP05111 366 aa8.99□□□□□ -0.97
TARDBP-219ENST00000617757 LGALS2P05162 132 aa8.99□□□□□ -0.97
TARDBP-219ENST00000617757 SSBP05455 408 aaKnown RBP eCLIP8.99□□□□□ -0.97
TARDBP-219ENST00000617757 MMP3P08254 477 aa8.99□□□□□ -0.97
TARDBP-219ENST00000617757 HOXD8P13378 290 aaPredicted RBP8.99□□□□□ -0.97
TARDBP-219ENST00000617757 CYP11B2P19099 503 aa8.99□□□□□ -0.97
TARDBP-219ENST00000617757 SARSP49591 514 aaKnown RBP8.99□□□□□ -0.97
TARDBP-219ENST00000617757 RARRES1P49788 294 aa8.99□□□□□ -0.97
TARDBP-219ENST00000617757 GJA9P57773 515 aa8.99□□□□□ -0.97
TARDBP-219ENST00000617757 IRX5P78411 483 aaPredicted RBP8.99□□□□□ -0.97
TARDBP-219ENST00000617757 PRKCEQ02156 737 aa8.99□□□□□ -0.97
TARDBP-219ENST00000617757 NT5DC1Q5TFE4 455 aa8.99□□□□□ -0.97
TARDBP-219ENST00000617757 RINT1Q6NUQ1 792 aa8.99□□□□□ -0.97
TARDBP-219ENST00000617757 CNNM4Q6P4Q7 775 aa8.99□□□□□ -0.97
TARDBP-219ENST00000617757 OTUD6AQ7L8S5 288 aa8.99□□□□□ -0.97
TARDBP-219ENST00000617757 DYMQ7RTS9 669 aa8.99□□□□□ -0.97
TARDBP-219ENST00000617757 TRMT1LQ7Z2T5 733 aaKnown RBP8.99□□□□□ -0.97
TARDBP-219ENST00000617757 SPATA20Q8TB22 786 aa8.99□□□□□ -0.97
TARDBP-219ENST00000617757 GLG1Q92896 1179 aa8.99□□□□□ -0.97
TARDBP-219ENST00000617757 DNAJC19Q96DA6 116 aa8.99□□□□□ -0.97
TARDBP-219ENST00000617757 ANP32EQ9BTT0 268 aa8.99□□□□□ -0.97
TARDBP-219ENST00000617757 FUCA2Q9BTY2 467 aa8.99□□□□□ -0.97
TARDBP-219ENST00000617757 TRIM9Q9C026 710 aa8.99□□□□□ -0.97
TARDBP-219ENST00000617757 AP5M1Q9H0R1 490 aa8.99□□□□□ -0.97
TARDBP-219ENST00000617757 SMARCAD1Q9H4L7 1026 aa8.99□□□□□ -0.97
TARDBP-219ENST00000617757 AZI2Q9H6S1 392 aa8.99□□□□□ -0.97
TARDBP-219ENST00000617757 TRIP12Q14669 1992 aaPredicted RBP8.99□□□□□ -0.97
TARDBP-219ENST00000617757 NPHP3-ACAD11A0A0J9YXS1 232 aa8.98□□□□□ -0.97
TARDBP-219ENST00000617757 ARHGEF35A5YM69 484 aa8.98□□□□□ -0.97
TARDBP-219ENST00000617757 KLRC4O43908 158 aa8.98□□□□□ -0.97
TARDBP-219ENST00000617757 OATP04181 439 aa8.98□□□□□ -0.97
TARDBP-219ENST00000617757 RPN1P04843 607 aaKnown RBP8.98□□□□□ -0.97
TARDBP-219ENST00000617757 HSPA1AP0DMV8 641 aaKnown RBP8.98□□□□□ -0.97
TARDBP-219ENST00000617757 HSPA1BP0DMV9 641 aaKnown RBP8.98□□□□□ -0.97
TARDBP-219ENST00000617757 RARBP10826 455 aa8.98□□□□□ -0.97
TARDBP-219ENST00000617757 CPT1AP50416 773 aa8.98□□□□□ -0.97
TARDBP-219ENST00000617757 SLC26A2P50443 739 aa8.98□□□□□ -0.97
TARDBP-219ENST00000617757 NPEPPSP55786 919 aa8.98□□□□□ -0.97
TARDBP-219ENST00000617757 ZNF445P59923 1031 aa8.98□□□□□ -0.97
TARDBP-219ENST00000617757 NKX3-2P78367 333 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms