RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 TRAF3IP3Q9Y228 551 aa19.14■□□□□ 0.66
PCDHGC3-205ENST00000617641 PTPRFP10586 1907 aa19.14■□□□□ 0.65
PCDHGC3-205ENST00000617641 PHLPP2Q6ZVD8 1323 aa19.14■□□□□ 0.65
PCDHGC3-205ENST00000617641 GNA14O95837 355 aa19.14■□□□□ 0.65
PCDHGC3-205ENST00000617641 NR3C2P08235 984 aa19.14■□□□□ 0.65
PCDHGC3-205ENST00000617641 ZBED6P86452 979 aa19.14■□□□□ 0.65
PCDHGC3-205ENST00000617641 BMT2Q1RMZ1 405 aa19.14■□□□□ 0.65
PCDHGC3-205ENST00000617641 TSR1Q2NL82 804 aaKnown RBP19.14■□□□□ 0.65
PCDHGC3-205ENST00000617641 FIGNQ5HY92 759 aa19.14■□□□□ 0.65
PCDHGC3-205ENST00000617641 VSIG10LQ86VR7 867 aa19.14■□□□□ 0.65
PCDHGC3-205ENST00000617641 SMCR8Q8TEV9 937 aaPredicted RBP19.14■□□□□ 0.65
PCDHGC3-205ENST00000617641 ZSWIM4Q9H7M6 989 aa19.14■□□□□ 0.65
PCDHGC3-205ENST00000617641 ACAD9Q9H845 621 aa19.14■□□□□ 0.65
PCDHGC3-205ENST00000617641 PARVGQ9HBI0 331 aa19.14■□□□□ 0.65
PCDHGC3-205ENST00000617641 LZTFL1Q9NQ48 299 aa19.14■□□□□ 0.65
PCDHGC3-205ENST00000617641 A1CFQ9NQ94 594 aaKnown RBP19.14■□□□□ 0.65
PCDHGC3-205ENST00000617641 FAM207AQ9NSI2 230 aaPredicted RBP19.14■□□□□ 0.65
PCDHGC3-205ENST00000617641 CYP39A1Q9NYL5 469 aa19.14■□□□□ 0.65
PCDHGC3-205ENST00000617641 CETN3O15182 167 aa19.13■□□□□ 0.65
PCDHGC3-205ENST00000617641 TRIM59Q8IWR1 403 aa19.13■□□□□ 0.65
PCDHGC3-205ENST00000617641 MMRN2Q9H8L6 949 aa19.13■□□□□ 0.65
PCDHGC3-205ENST00000617641 ASTN1O14525 1302 aa19.13■□□□□ 0.65
PCDHGC3-205ENST00000617641 MYPNQ86TC9 1320 aa19.13■□□□□ 0.65
PCDHGC3-205ENST00000617641 A0A1W2PQJ5 194 aa19.13■□□□□ 0.65
PCDHGC3-205ENST00000617641 CTIFO43310 598 aaKnown RBP19.13■□□□□ 0.65
PCDHGC3-205ENST00000617641 PEX10O60683 326 aa19.13■□□□□ 0.65
PCDHGC3-205ENST00000617641 MARSP56192 900 aaKnown RBP19.13■□□□□ 0.65
PCDHGC3-205ENST00000617641 GNG11P61952 73 aa19.13■□□□□ 0.65
PCDHGC3-205ENST00000617641 WDR24Q96S15 920 aa19.13■□□□□ 0.65
PCDHGC3-205ENST00000617641 KCND2Q9NZV8 630 aa19.13■□□□□ 0.65
PCDHGC3-205ENST00000617641 LOXHD1Q8IVV2 1947 aa19.13■□□□□ 0.65
PCDHGC3-205ENST00000617641 PDXKO00764 312 aa19.12■□□□□ 0.65
PCDHGC3-205ENST00000617641 CCNE2O96020 404 aa19.12■□□□□ 0.65
PCDHGC3-205ENST00000617641 QARSP47897 775 aaKnown RBP19.12■□□□□ 0.65
PCDHGC3-205ENST00000617641 ZNF131P52739 623 aa19.12■□□□□ 0.65
PCDHGC3-205ENST00000617641 MEA1Q16626 185 aa19.12■□□□□ 0.65
PCDHGC3-205ENST00000617641 UGCGQ16739 394 aa19.12■□□□□ 0.65
PCDHGC3-205ENST00000617641 ZC2HC1CQ53FD0 456 aaPredicted RBP19.12■□□□□ 0.65
PCDHGC3-205ENST00000617641 XRRA1Q6P2D8 792 aa19.12■□□□□ 0.65
PCDHGC3-205ENST00000617641 NSUN6Q8TEA1 469 aaKnown RBP19.12■□□□□ 0.65
PCDHGC3-205ENST00000617641 IKZF4Q9H2S9 585 aa19.12■□□□□ 0.65
PCDHGC3-205ENST00000617641 ELP3Q9H9T3 547 aa19.12■□□□□ 0.65
PCDHGC3-205ENST00000617641 TYW1Q9NV66 732 aaKnown RBP19.12■□□□□ 0.65
PCDHGC3-205ENST00000617641 ODF2LQ9ULJ1 636 aa19.12■□□□□ 0.65
PCDHGC3-205ENST00000617641 CALUO43852 315 aaPredicted RBP19.12■□□□□ 0.65
PCDHGC3-205ENST00000617641 GUCY2CP25092 1073 aa19.12■□□□□ 0.65
PCDHGC3-205ENST00000617641 PADI6Q6TGC4 694 aa19.12■□□□□ 0.65
PCDHGC3-205ENST00000617641 FIZ1Q96SL8 496 aa19.12■□□□□ 0.65
PCDHGC3-205ENST00000617641 IRX2Q9BZI1 471 aaPredicted RBP19.12■□□□□ 0.65
PCDHGC3-205ENST00000617641 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.12■□□□□ 0.65
PCDHGC3-205ENST00000617641 EIF3DO15371 548 aaKnown RBP eCLIP19.11■□□□□ 0.65
PCDHGC3-205ENST00000617641 HIP1RO75146 1068 aa19.11■□□□□ 0.65
PCDHGC3-205ENST00000617641 RBM10P98175 930 aaKnown RBP19.11■□□□□ 0.65
PCDHGC3-205ENST00000617641 MOB2Q70IA6 237 aa19.11■□□□□ 0.65
PCDHGC3-205ENST00000617641 KSR1Q8IVT5 923 aa19.11■□□□□ 0.65
PCDHGC3-205ENST00000617641 ZNF397Q8NF99 534 aaPredicted RBP19.11■□□□□ 0.65
PCDHGC3-205ENST00000617641 CLMNQ96JQ2 1002 aa19.11■□□□□ 0.65
PCDHGC3-205ENST00000617641 SEL1LQ9UBV2 794 aa19.11■□□□□ 0.65
PCDHGC3-205ENST00000617641 EPN1Q9Y6I3 576 aaPredicted RBP19.11■□□□□ 0.65
PCDHGC3-205ENST00000617641 ZMYM2Q9UBW7 1377 aa19.11■□□□□ 0.65
PCDHGC3-205ENST00000617641 TMEM150BA6NC51 233 aa19.11■□□□□ 0.65
PCDHGC3-205ENST00000617641 NDUFA10O95299 355 aa19.11■□□□□ 0.65
PCDHGC3-205ENST00000617641 IREB2P48200 963 aaKnown RBP19.11■□□□□ 0.65
PCDHGC3-205ENST00000617641 KCNMA1Q12791 1236 aa19.11■□□□□ 0.65
PCDHGC3-205ENST00000617641 MAPK7Q13164 816 aa19.11■□□□□ 0.65
PCDHGC3-205ENST00000617641 ODR4Q5SWX8 454 aa19.11■□□□□ 0.65
PCDHGC3-205ENST00000617641 GADL1Q6ZQY3 521 aa19.11■□□□□ 0.65
PCDHGC3-205ENST00000617641 MAEAQ7L5Y9 396 aa19.11■□□□□ 0.65
PCDHGC3-205ENST00000617641 FAM178BQ8IXR5 827 aa19.11■□□□□ 0.65
PCDHGC3-205ENST00000617641 DAW1Q8N136 415 aa19.11■□□□□ 0.65
PCDHGC3-205ENST00000617641 GPRASP2Q96D09 838 aa19.11■□□□□ 0.65
PCDHGC3-205ENST00000617641 IQCDQ96DY2 449 aa19.11■□□□□ 0.65
PCDHGC3-205ENST00000617641 OTUD5Q96G74 571 aa19.11■□□□□ 0.65
PCDHGC3-205ENST00000617641 INPP4AQ96PE3 977 aaPredicted RBP19.11■□□□□ 0.65
PCDHGC3-205ENST00000617641 ZNHIT6Q9NWK9 470 aaKnown RBP19.11■□□□□ 0.65
PCDHGC3-205ENST00000617641 TCEAL9Q9UHQ7 104 aa19.11■□□□□ 0.65
PCDHGC3-205ENST00000617641 CLIC2O15247 247 aa19.1■□□□□ 0.65
PCDHGC3-205ENST00000617641 TGFB1I1O43294 461 aa19.1■□□□□ 0.65
PCDHGC3-205ENST00000617641 RGS20O76081 388 aa19.1■□□□□ 0.65
PCDHGC3-205ENST00000617641 NR3C1P04150 777 aa19.1■□□□□ 0.65
PCDHGC3-205ENST00000617641 TRMT1LQ7Z2T5 733 aaKnown RBP19.1■□□□□ 0.65
PCDHGC3-205ENST00000617641 SH2D3AQ9BRG2 576 aa19.1■□□□□ 0.65
PCDHGC3-205ENST00000617641 DBR1Q9UK59 544 aaKnown RBP19.1■□□□□ 0.65
PCDHGC3-205ENST00000617641 REXO2Q9Y3B8 237 aaKnown RBP19.1■□□□□ 0.65
PCDHGC3-205ENST00000617641 MYH11P35749 1972 aa19.1■□□□□ 0.65
PCDHGC3-205ENST00000617641 WDR64B1ANS9 1081 aa19.09■□□□□ 0.65
PCDHGC3-205ENST00000617641 IRF6O14896 467 aa19.09■□□□□ 0.65
PCDHGC3-205ENST00000617641 ABL1P00519 1130 aa19.09■□□□□ 0.65
PCDHGC3-205ENST00000617641 RARRES1P49788 294 aa19.09■□□□□ 0.65
PCDHGC3-205ENST00000617641 KRT76Q01546 638 aa19.09■□□□□ 0.65
PCDHGC3-205ENST00000617641 ZNF720Q7Z2F6 126 aa19.09■□□□□ 0.65
PCDHGC3-205ENST00000617641 NLRX1Q86UT6 975 aa19.09■□□□□ 0.65
PCDHGC3-205ENST00000617641 CDCA5Q96FF9 252 aa19.09■□□□□ 0.65
PCDHGC3-205ENST00000617641 L2HGDHQ9H9P8 463 aa19.09■□□□□ 0.65
PCDHGC3-205ENST00000617641 ZNF215Q9UL58 517 aaPredicted RBP19.09■□□□□ 0.65
PCDHGC3-205ENST00000617641 KIAA1217Q5T5P2 1943 aa19.09■□□□□ 0.65
PCDHGC3-205ENST00000617641 LCTP09848 1927 aa19.09■□□□□ 0.65
PCDHGC3-205ENST00000617641 LYPLA2O95372 231 aa19.09■□□□□ 0.65
PCDHGC3-205ENST00000617641 YWHABP31946 246 aaKnown RBP19.09■□□□□ 0.65
PCDHGC3-205ENST00000617641 JAK3P52333 1124 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms