RNA–Protein interactions for RNA: ENST00000617617.4

PDPN-211, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 2,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-211ENST00000617617 UGCGQ16739 394 aa13.07□□□□□ -0.32
PDPN-211ENST00000617617 FAM160B1Q5W0V3 765 aa13.07□□□□□ -0.32
PDPN-211ENST00000617617 C11orf57Q6ZUT1 292 aaPredicted RBP13.07□□□□□ -0.32
PDPN-211ENST00000617617 GPBP1Q86WP2 473 aa13.07□□□□□ -0.32
PDPN-211ENST00000617617 BLZF1Q9H2G9 400 aa13.07□□□□□ -0.32
PDPN-211ENST00000617617 SEL1LQ9UBV2 794 aa13.07□□□□□ -0.32
PDPN-211ENST00000617617 PCDHA2Q9Y5H9 948 aa13.07□□□□□ -0.32
PDPN-211ENST00000617617 PPP1R3GB7ZBB8 358 aa13.07□□□□□ -0.32
PDPN-211ENST00000617617 TXNP10599 105 aaKnown RBP13.07□□□□□ -0.32
PDPN-211ENST00000617617 MAPTP10636 758 aaKnown RBP13.07□□□□□ -0.32
PDPN-211ENST00000617617 YWHABP31946 246 aaKnown RBP13.07□□□□□ -0.32
PDPN-211ENST00000617617 RARRES1P49788 294 aa13.07□□□□□ -0.32
PDPN-211ENST00000617617 PRMT2P55345 433 aa13.07□□□□□ -0.32
PDPN-211ENST00000617617 CYP4A11Q02928 519 aa13.07□□□□□ -0.32
PDPN-211ENST00000617617 OTUD6AQ7L8S5 288 aa13.07□□□□□ -0.32
PDPN-211ENST00000617617 CCDC65Q8IXS2 484 aa13.07□□□□□ -0.32
PDPN-211ENST00000617617 BANK1Q8NDB2 785 aa13.07□□□□□ -0.32
PDPN-211ENST00000617617 ERCC4Q92889 916 aaPredicted RBP13.07□□□□□ -0.32
PDPN-211ENST00000617617 FAM167AQ96KS9 214 aa13.07□□□□□ -0.32
PDPN-211ENST00000617617 UIMC1Q96RL1 719 aa13.07□□□□□ -0.32
PDPN-211ENST00000617617 PDLIM7Q9NR12 457 aa13.07□□□□□ -0.32
PDPN-211ENST00000617617 FLRT1Q9NZU1 646 aa13.07□□□□□ -0.32
PDPN-211ENST00000617617 PKD2L1Q9P0L9 805 aa13.07□□□□□ -0.32
PDPN-211ENST00000617617 PSMC4P43686 418 aa13.06□□□□□ -0.32
PDPN-211ENST00000617617 ZNF165P49910 485 aa13.06□□□□□ -0.32
PDPN-211ENST00000617617 KIF22Q14807 665 aa13.06□□□□□ -0.32
PDPN-211ENST00000617617 LY6KQ17RY6 165 aa13.06□□□□□ -0.32
PDPN-211ENST00000617617 XKR3Q5GH77 459 aa13.06□□□□□ -0.32
PDPN-211ENST00000617617 CCDC60Q8IWA6 550 aaPredicted RBP13.06□□□□□ -0.32
PDPN-211ENST00000617617 DHX40Q8IX18 779 aaKnown RBP13.06□□□□□ -0.32
PDPN-211ENST00000617617 PCYT2Q99447 389 aa13.06□□□□□ -0.32
PDPN-211ENST00000617617 DNAJC25Q9H1X3 360 aa13.06□□□□□ -0.32
PDPN-211ENST00000617617 BCAS3Q9H6U6 928 aa13.06□□□□□ -0.32
PDPN-211ENST00000617617 CBX8Q9HC52 389 aa13.06□□□□□ -0.32
PDPN-211ENST00000617617 ZNF302Q9NR11 478 aa13.06□□□□□ -0.32
PDPN-211ENST00000617617 RTP1P59025 263 aa13.06□□□□□ -0.32
PDPN-211ENST00000617617 ASIC1P78348 528 aa13.06□□□□□ -0.32
PDPN-211ENST00000617617 CEP89Q96ST8 783 aa13.06□□□□□ -0.32
PDPN-211ENST00000617617 BHMT2Q9H2M3 363 aa13.06□□□□□ -0.32
PDPN-211ENST00000617617 OLFML3Q9NRN5 406 aa13.06□□□□□ -0.32
PDPN-211ENST00000617617 EXOC1Q9NV70 894 aa13.06□□□□□ -0.32
PDPN-211ENST00000617617 GABBR1Q9UBS5 961 aa13.06□□□□□ -0.32
PDPN-211ENST00000617617 GNEQ9Y223 722 aaKnown RBP13.06□□□□□ -0.32
PDPN-211ENST00000617617 SAMM50Q9Y512 469 aa13.06□□□□□ -0.32
PDPN-211ENST00000617617 UBE4BO95155 1302 aa13.05□□□□□ -0.32
PDPN-211ENST00000617617 SMTNL1A8MU46 457 aa13.05□□□□□ -0.32
PDPN-211ENST00000617617 ZNF862O60290 1169 aa13.05□□□□□ -0.32
PDPN-211ENST00000617617 SCP2P22307 547 aa13.05□□□□□ -0.32
PDPN-211ENST00000617617 DHX37Q8IY37 1157 aaKnown RBP13.05□□□□□ -0.32
PDPN-211ENST00000617617 ADSSL1Q8N142 457 aa13.05□□□□□ -0.32
PDPN-211ENST00000617617 ENOX1Q8TC92 643 aaKnown RBP13.05□□□□□ -0.32
PDPN-211ENST00000617617 STAMQ92783 540 aa13.05□□□□□ -0.32
PDPN-211ENST00000617617 DHTKD1Q96HY7 919 aaPredicted RBP13.05□□□□□ -0.32
PDPN-211ENST00000617617 MLXIPQ9HAP2 919 aa13.05□□□□□ -0.32
PDPN-211ENST00000617617 PDGFCQ9NRA1 345 aa13.05□□□□□ -0.32
PDPN-211ENST00000617617 HOXD10P28358 340 aa13.05□□□□□ -0.32
PDPN-211ENST00000617617 CASP1P29466 404 aa13.05□□□□□ -0.32
PDPN-211ENST00000617617 COASYQ13057 564 aa13.05□□□□□ -0.32
PDPN-211ENST00000617617 TARBP2Q15633 366 aaKnown RBP13.05□□□□□ -0.32
PDPN-211ENST00000617617 ANO5Q75V66 913 aa13.05□□□□□ -0.32
PDPN-211ENST00000617617 RUSC1Q9BVN2 902 aa13.05□□□□□ -0.32
PDPN-211ENST00000617617 RWDD2AQ9UIY3 292 aa13.05□□□□□ -0.32
PDPN-211ENST00000617617 ARHGEF35A5YM69 484 aa13.04□□□□□ -0.32
PDPN-211ENST00000617617 OATP04181 439 aa13.04□□□□□ -0.32
PDPN-211ENST00000617617 ATP4AP20648 1035 aa13.04□□□□□ -0.32
PDPN-211ENST00000617617 NCAPHQ15003 741 aa13.04□□□□□ -0.32
PDPN-211ENST00000617617 BMT2Q1RMZ1 405 aa13.04□□□□□ -0.32
PDPN-211ENST00000617617 SWSAP1Q6NVH7 229 aa13.04□□□□□ -0.32
PDPN-211ENST00000617617 EXOC8Q8IYI6 725 aa13.04□□□□□ -0.32
PDPN-211ENST00000617617 SLC17A8Q8NDX2 589 aa13.04□□□□□ -0.32
PDPN-211ENST00000617617 ERO1AQ96HE7 468 aa13.04□□□□□ -0.32
PDPN-211ENST00000617617 ST6GALNAC4Q9H4F1 302 aa13.04□□□□□ -0.32
PDPN-211ENST00000617617 C17orf75Q9HAS0 396 aa13.04□□□□□ -0.32
PDPN-211ENST00000617617 PANK4Q9NVE7 773 aa13.04□□□□□ -0.32
PDPN-211ENST00000617617 COL4A3BPQ9Y5P4 624 aa13.04□□□□□ -0.32
PDPN-211ENST00000617617 COL1A2P08123 1366 aa13.04□□□□□ -0.32
PDPN-211ENST00000617617 SMPD1P17405 629 aa13.04□□□□□ -0.32
PDPN-211ENST00000617617 TCF7P36402 384 aaPredicted RBP13.04□□□□□ -0.32
PDPN-211ENST00000617617 ARHGEF6Q15052 776 aa13.04□□□□□ -0.32
PDPN-211ENST00000617617 EPM2AIP1Q7L775 607 aaPredicted RBP13.04□□□□□ -0.32
PDPN-211ENST00000617617 GUF1Q8N442 669 aaKnown RBP13.04□□□□□ -0.32
PDPN-211ENST00000617617 TMEM174Q8WUU8 243 aa13.04□□□□□ -0.32
PDPN-211ENST00000617617 REEP2Q9BRK0 252 aa13.04□□□□□ -0.32
PDPN-211ENST00000617617 SMARCAD1Q9H4L7 1026 aa13.04□□□□□ -0.32
PDPN-211ENST00000617617 KAT6AQ92794 2004 aa13.03□□□□□ -0.32
PDPN-211ENST00000617617 GPR25O00155 361 aa13.03□□□□□ -0.32
PDPN-211ENST00000617617 BIN1O00499 593 aa13.03□□□□□ -0.32
PDPN-211ENST00000617617 PPFIA4O75335 1185 aa13.03□□□□□ -0.32
PDPN-211ENST00000617617 TBC1D8O95759 1140 aa13.03□□□□□ -0.32
PDPN-211ENST00000617617 CYBAP13498 195 aa13.03□□□□□ -0.32
PDPN-211ENST00000617617 RFC5P40937 340 aa13.03□□□□□ -0.32
PDPN-211ENST00000617617 PRKCEQ02156 737 aa13.03□□□□□ -0.32
PDPN-211ENST00000617617 PADI6Q6TGC4 694 aa13.03□□□□□ -0.32
PDPN-211ENST00000617617 PXYLP1Q8TE99 480 aa13.03□□□□□ -0.32
PDPN-211ENST00000617617 PIGOQ8TEQ8 1089 aa13.03□□□□□ -0.32
PDPN-211ENST00000617617 BBXQ8WY36 941 aaPredicted RBP13.03□□□□□ -0.32
PDPN-211ENST00000617617 SPATA33Q96N06 139 aa13.03□□□□□ -0.32
PDPN-211ENST00000617617 UPF3AQ9H1J1 476 aaKnown RBP13.03□□□□□ -0.32
PDPN-211ENST00000617617 KCNG1Q9UIX4 513 aa13.03□□□□□ -0.32
PDPN-211ENST00000617617 EIF3DO15371 548 aaKnown RBP eCLIP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms