RNA–Protein interactions for RNA: ENST00000617432.4

CUL3-216, Transcript of cullin 3, humanhuman

TSL 5 BASIC

Gene CUL3, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-216ENST00000617432 MAP3K11Q16584 847 aa5.91□□□□□ -1.46
CUL3-216ENST00000617432 STYK1Q6J9G0 422 aa5.91□□□□□ -1.46
CUL3-216ENST00000617432 NLRP10Q86W26 655 aa5.91□□□□□ -1.46
CUL3-216ENST00000617432 KISS1RQ969F8 398 aaPredicted RBP5.91□□□□□ -1.46
CUL3-216ENST00000617432 MASTLQ96GX5 879 aa5.91□□□□□ -1.46
CUL3-216ENST00000617432 ZNF747Q9BV97 191 aa5.91□□□□□ -1.46
CUL3-216ENST00000617432 DDX21Q9NR30 783 aaKnown RBP eCLIP5.91□□□□□ -1.46
CUL3-216ENST00000617432 IFT57Q9NWB7 429 aa5.91□□□□□ -1.46
CUL3-216ENST00000617432 RIC1Q4ADV7 1423 aa5.91□□□□□ -1.46
CUL3-216ENST00000617432 ZNF541Q9H0D2 1346 aa5.91□□□□□ -1.46
CUL3-216ENST00000617432 NPR1P16066 1061 aa5.91□□□□□ -1.46
CUL3-216ENST00000617432 EIF4BP23588 611 aaKnown RBP5.91□□□□□ -1.46
CUL3-216ENST00000617432 LIG3P49916 1009 aa5.91□□□□□ -1.46
CUL3-216ENST00000617432 RNF4P78317 190 aa5.91□□□□□ -1.46
CUL3-216ENST00000617432 CRY2Q49AN0 593 aa5.91□□□□□ -1.46
CUL3-216ENST00000617432 G2E3Q7L622 706 aa5.91□□□□□ -1.46
CUL3-216ENST00000617432 FAM9BQ8IZU0 186 aa5.91□□□□□ -1.46
CUL3-216ENST00000617432 FRMD6Q96NE9 622 aa5.91□□□□□ -1.46
CUL3-216ENST00000617432 ASB16Q96NS5 453 aa5.91□□□□□ -1.46
CUL3-216ENST00000617432 ZNF277Q9NRM2 450 aaPredicted RBP5.91□□□□□ -1.46
CUL3-216ENST00000617432 BABAM1Q9NWV8 329 aa5.91□□□□□ -1.46
CUL3-216ENST00000617432 DUOX1Q9NRD9 1551 aa5.9□□□□□ -1.46
CUL3-216ENST00000617432 LTBP1Q14766 1721 aa5.9□□□□□ -1.47
CUL3-216ENST00000617432 IBTKQ9P2D0 1353 aaPredicted RBP5.9□□□□□ -1.47
CUL3-216ENST00000617432 ABCC4O15439 1325 aa5.9□□□□□ -1.47
CUL3-216ENST00000617432 FANCIQ9NVI1 1328 aa5.9□□□□□ -1.47
CUL3-216ENST00000617432 SARSP49591 514 aaKnown RBP5.9□□□□□ -1.47
CUL3-216ENST00000617432 PAQR3Q6TCH7 311 aa5.9□□□□□ -1.47
CUL3-216ENST00000617432 TMC3Q7Z5M5 1100 aa5.9□□□□□ -1.47
CUL3-216ENST00000617432 ISCA1Q9BUE6 129 aa5.9□□□□□ -1.47
CUL3-216ENST00000617432 VPS11Q9H270 941 aa5.9□□□□□ -1.47
CUL3-216ENST00000617432 TAOK3Q9H2K8 898 aa5.9□□□□□ -1.47
CUL3-216ENST00000617432 ERVK13-1Q9NX77 482 aa5.9□□□□□ -1.47
CUL3-216ENST00000617432 IMPACTQ9P2X3 320 aa5.9□□□□□ -1.47
CUL3-216ENST00000617432 DICER1Q9UPY3 1922 aaKnown RBP5.89□□□□□ -1.47
CUL3-216ENST00000617432 CHURC1-FNTBB4DL54 471 aa5.89□□□□□ -1.47
CUL3-216ENST00000617432 DDNO94850 711 aaPredicted RBP5.89□□□□□ -1.47
CUL3-216ENST00000617432 BRD1O95696 1058 aa5.89□□□□□ -1.47
CUL3-216ENST00000617432 CYBBP04839 570 aa5.89□□□□□ -1.47
CUL3-216ENST00000617432 LDHBP07195 334 aaKnown RBP5.89□□□□□ -1.47
CUL3-216ENST00000617432 GNAI1P63096 354 aa5.89□□□□□ -1.47
CUL3-216ENST00000617432 TCIRG1Q13488 830 aa5.89□□□□□ -1.47
CUL3-216ENST00000617432 CCDC93Q567U6 631 aa5.89□□□□□ -1.47
CUL3-216ENST00000617432 ZNF761Q86XN6 746 aaPredicted RBP5.89□□□□□ -1.47
CUL3-216ENST00000617432 PLBD2Q8NHP8 589 aa5.89□□□□□ -1.47
CUL3-216ENST00000617432 FAM89AQ96GI7 184 aa5.89□□□□□ -1.47
CUL3-216ENST00000617432 GPR101Q96P66 508 aaPredicted RBP5.89□□□□□ -1.47
CUL3-216ENST00000617432 MYD88Q99836 296 aa5.89□□□□□ -1.47
CUL3-216ENST00000617432 UTP14AQ9BVJ6 771 aaKnown RBP5.89□□□□□ -1.47
CUL3-216ENST00000617432 NYXQ9GZU5 481 aa5.89□□□□□ -1.47
CUL3-216ENST00000617432 WDR90Q96KV7 1748 aa5.89□□□□□ -1.47
CUL3-216ENST00000617432 LTBP3Q9NS15 1303 aa5.88□□□□□ -1.47
CUL3-216ENST00000617432 LRRC37AA6NMS7 1700 aa5.88□□□□□ -1.47
CUL3-216ENST00000617432 HOXB7P09629 217 aa5.88□□□□□ -1.47
CUL3-216ENST00000617432 NCAM1P13591 858 aa5.88□□□□□ -1.47
CUL3-216ENST00000617432 TFE3P19532 575 aaPredicted RBP5.88□□□□□ -1.47
CUL3-216ENST00000617432 TGM1P22735 817 aa5.88□□□□□ -1.47
CUL3-216ENST00000617432 GBP1P32455 592 aa5.88□□□□□ -1.47
CUL3-216ENST00000617432 CDSNQ15517 529 aa5.88□□□□□ -1.47
CUL3-216ENST00000617432 NBPF9Q3BBW0 867 aa5.88□□□□□ -1.47
CUL3-216ENST00000617432 PARP10Q53GL7 1025 aa5.88□□□□□ -1.47
CUL3-216ENST00000617432 PPP1R42Q7Z4L9 355 aa5.88□□□□□ -1.47
CUL3-216ENST00000617432 PHACTR4Q8IZ21 702 aa5.88□□□□□ -1.47
CUL3-216ENST00000617432 RPGRQ92834 1020 aaKnown RBP5.88□□□□□ -1.47
CUL3-216ENST00000617432 CELF1Q92879 486 aaKnown RBP5.88□□□□□ -1.47
CUL3-216ENST00000617432 KIF2CQ99661 725 aa5.88□□□□□ -1.47
CUL3-216ENST00000617432 SSBP3Q9BWW4 388 aaPredicted RBP5.88□□□□□ -1.47
CUL3-216ENST00000617432 DBF4Q9UBU7 674 aaPredicted RBP5.88□□□□□ -1.47
CUL3-216ENST00000617432 TRMT112Q9UI30 125 aaKnown RBP5.88□□□□□ -1.47
CUL3-216ENST00000617432 SH3TC1Q8TE82 1336 aa5.87□□□□□ -1.47
CUL3-216ENST00000617432 GLTPD2A6NH11 291 aa5.87□□□□□ -1.47
CUL3-216ENST00000617432 SRGAP3O43295 1099 aa5.87□□□□□ -1.47
CUL3-216ENST00000617432 IGKV5-2P06315 115 aa5.87□□□□□ -1.47
CUL3-216ENST00000617432 HSPA6P17066 643 aa5.87□□□□□ -1.47
CUL3-216ENST00000617432 IARSP41252 1262 aaKnown RBP5.87□□□□□ -1.47
CUL3-216ENST00000617432 MVKQ03426 396 aa5.87□□□□□ -1.47
CUL3-216ENST00000617432 EXOSC9Q06265 439 aaKnown RBP5.87□□□□□ -1.47
CUL3-216ENST00000617432 CCDC27Q2M243 656 aa5.87□□□□□ -1.47
CUL3-216ENST00000617432 CWF19L2Q2TBE0 894 aaKnown RBP5.87□□□□□ -1.47
CUL3-216ENST00000617432 TWISTNBQ3B726 338 aaPredicted RBP5.87□□□□□ -1.47
CUL3-216ENST00000617432 SLC10A5Q5PT55 438 aa5.87□□□□□ -1.47
CUL3-216ENST00000617432 B3GNT8Q7Z7M8 397 aa5.87□□□□□ -1.47
CUL3-216ENST00000617432 HYPKQ9NX55 129 aa5.87□□□□□ -1.47
CUL3-216ENST00000617432 NTMQ9P121 344 aa5.87□□□□□ -1.47
CUL3-216ENST00000617432 KLHL3Q9UH77 587 aa5.87□□□□□ -1.47
CUL3-216ENST00000617432 ST6GALNAC2Q9UJ37 374 aa5.87□□□□□ -1.47
CUL3-216ENST00000617432 MAP3K2Q9Y2U5 619 aa5.87□□□□□ -1.47
CUL3-216ENST00000617432 SPEF2Q9C093 1822 aa5.86□□□□□ -1.47
CUL3-216ENST00000617432 RNF123Q5XPI4 1314 aa5.86□□□□□ -1.47
CUL3-216ENST00000617432 KDM2BQ8NHM5 1336 aa5.86□□□□□ -1.47
CUL3-216ENST00000617432 ZNF521Q96K83 1311 aa5.86□□□□□ -1.47
CUL3-216ENST00000617432 SHTN1A0MZ66 631 aa5.86□□□□□ -1.47
CUL3-216ENST00000617432 PI4KAP2A4QPH2 592 aa5.86□□□□□ -1.47
CUL3-216ENST00000617432 F6X3S4 739 aa5.86□□□□□ -1.47
CUL3-216ENST00000617432 VAMP4O75379 141 aa5.86□□□□□ -1.47
CUL3-216ENST00000617432 TOMM70O94826 608 aa5.86□□□□□ -1.47
CUL3-216ENST00000617432 PRAMEF1O95521 474 aa5.86□□□□□ -1.47
CUL3-216ENST00000617432 P4HBP07237 508 aaKnown RBP5.86□□□□□ -1.47
CUL3-216ENST00000617432 DBHP09172 617 aa5.86□□□□□ -1.47
CUL3-216ENST00000617432 GNA15P30679 374 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms