RNA–Protein interactions for RNA: ENST00000617172.4

TARDBP-218, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 980 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-218ENST00000617172 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.98□□□□□ -0.65
TARDBP-218ENST00000617172 DHX15O43143 795 aaKnown RBP10.98□□□□□ -0.65
TARDBP-218ENST00000617172 UPP2O95045 317 aa10.98□□□□□ -0.65
TARDBP-218ENST00000617172 CCNE2O96020 404 aa10.98□□□□□ -0.65
TARDBP-218ENST00000617172 GHRP10912 638 aa10.98□□□□□ -0.65
TARDBP-218ENST00000617172 CCT2P78371 535 aaKnown RBP10.98□□□□□ -0.65
TARDBP-218ENST00000617172 KRT76Q01546 638 aa10.98□□□□□ -0.65
TARDBP-218ENST00000617172 LPIN1Q14693 890 aa10.98□□□□□ -0.65
TARDBP-218ENST00000617172 ZNF484Q5JVG2 852 aa10.98□□□□□ -0.65
TARDBP-218ENST00000617172 FBXO47Q5MNV8 452 aa10.98□□□□□ -0.65
TARDBP-218ENST00000617172 GALNT17Q6IS24 598 aa10.98□□□□□ -0.65
TARDBP-218ENST00000617172 PDXDC2PQ6P474 469 aa10.98□□□□□ -0.65
TARDBP-218ENST00000617172 MTHFD1LQ6UB35 978 aa10.98□□□□□ -0.65
TARDBP-218ENST00000617172 TSHZ1Q6ZSZ6 1077 aa10.98□□□□□ -0.65
TARDBP-218ENST00000617172 FBXO22Q8NEZ5 403 aa10.98□□□□□ -0.65
TARDBP-218ENST00000617172 ATP8B4Q8TF62 1192 aa10.98□□□□□ -0.65
TARDBP-218ENST00000617172 HLA-CQ95604 372 aa10.98□□□□□ -0.65
TARDBP-218ENST00000617172 IL17RAQ96F46 866 aa10.98□□□□□ -0.65
TARDBP-218ENST00000617172 OSBPL7Q9BZF2 842 aa10.98□□□□□ -0.65
TARDBP-218ENST00000617172 ZNF302Q9NR11 478 aa10.98□□□□□ -0.65
TARDBP-218ENST00000617172 PPP4R2Q9NY27 417 aa10.98□□□□□ -0.65
TARDBP-218ENST00000617172 MTUS1Q9ULD2 1270 aa10.98□□□□□ -0.65
TARDBP-218ENST00000617172 PCDHA10Q9Y5I2 948 aa10.98□□□□□ -0.65
TARDBP-218ENST00000617172 CDY2AQ9Y6F7 541 aa10.98□□□□□ -0.65
TARDBP-218ENST00000617172 DDX39AO00148 427 aaKnown RBP10.97□□□□□ -0.65
TARDBP-218ENST00000617172 TNFRSF10AO00220 468 aa10.97□□□□□ -0.65
TARDBP-218ENST00000617172 ENPP3O14638 875 aa10.97□□□□□ -0.65
TARDBP-218ENST00000617172 DEXIO95424 95 aa10.97□□□□□ -0.65
TARDBP-218ENST00000617172 PSAPP07602 524 aa10.97□□□□□ -0.65
TARDBP-218ENST00000617172 KLRC1P26715 233 aa10.97□□□□□ -0.65
TARDBP-218ENST00000617172 NLRP5P59047 1200 aa10.97□□□□□ -0.65
TARDBP-218ENST00000617172 TOB2Q14106 344 aaPredicted RBP10.97□□□□□ -0.65
TARDBP-218ENST00000617172 PTPROQ16827 1216 aa10.97□□□□□ -0.65
TARDBP-218ENST00000617172 PRR16Q569H4 304 aa10.97□□□□□ -0.65
TARDBP-218ENST00000617172 ODR4Q5SWX8 454 aa10.97□□□□□ -0.65
TARDBP-218ENST00000617172 SWSAP1Q6NVH7 229 aa10.97□□□□□ -0.65
TARDBP-218ENST00000617172 ZNF710Q8N1W2 664 aa10.97□□□□□ -0.65
TARDBP-218ENST00000617172 BBXQ8WY36 941 aaPredicted RBP10.97□□□□□ -0.65
TARDBP-218ENST00000617172 RIT2Q99578 217 aa10.97□□□□□ -0.65
TARDBP-218ENST00000617172 CELF4Q9BZC1 486 aaKnown RBP10.97□□□□□ -0.65
TARDBP-218ENST00000617172 FAM49AQ9H0Q0 323 aaPredicted RBP10.97□□□□□ -0.65
TARDBP-218ENST00000617172 NCOA5Q9HCD5 579 aaKnown RBP10.97□□□□□ -0.65
TARDBP-218ENST00000617172 PDRG1Q9NUG6 133 aa10.97□□□□□ -0.65
TARDBP-218ENST00000617172 VPS54Q9P1Q0 977 aa10.97□□□□□ -0.65
TARDBP-218ENST00000617172 CEP131Q9UPN4 1083 aa10.97□□□□□ -0.65
TARDBP-218ENST00000617172 RWDD3Q9Y3V2 267 aa10.97□□□□□ -0.65
TARDBP-218ENST00000617172 MAFBQ9Y5Q3 323 aaPredicted RBP10.97□□□□□ -0.65
TARDBP-218ENST00000617172 TRPV2Q9Y5S1 764 aa10.97□□□□□ -0.65
TARDBP-218ENST00000617172 KDM3AQ9Y4C1 1321 aa10.97□□□□□ -0.65
TARDBP-218ENST00000617172 COL1A2P08123 1366 aa10.97□□□□□ -0.65
TARDBP-218ENST00000617172 H3BNC9 293 aa10.96□□□□□ -0.65
TARDBP-218ENST00000617172 CDKL5O76039 1030 aa10.96□□□□□ -0.65
TARDBP-218ENST00000617172 EPC2Q52LR7 807 aa10.96□□□□□ -0.65
TARDBP-218ENST00000617172 KRT40Q6A162 431 aa10.96□□□□□ -0.65
TARDBP-218ENST00000617172 TMEM192Q8IY95 271 aa10.96□□□□□ -0.65
TARDBP-218ENST00000617172 CKAP2LQ8IYA6 745 aa10.96□□□□□ -0.65
TARDBP-218ENST00000617172 FIBCD1Q8N539 461 aa10.96□□□□□ -0.65
TARDBP-218ENST00000617172 ADAMTS19Q8TE59 1207 aa10.96□□□□□ -0.65
TARDBP-218ENST00000617172 FAM167AQ96KS9 214 aa10.96□□□□□ -0.65
TARDBP-218ENST00000617172 C17orf80Q9BSJ5 609 aa10.96□□□□□ -0.65
TARDBP-218ENST00000617172 PCDHA4Q9UN74 947 aa10.96□□□□□ -0.65
TARDBP-218ENST00000617172 SAMM50Q9Y512 469 aa10.96□□□□□ -0.65
TARDBP-218ENST00000617172 TRANK1O15050 2925 aa10.95□□□□□ -0.66
TARDBP-218ENST00000617172 IGSF9BQ9UPX0 1349 aa10.95□□□□□ -0.66
TARDBP-218ENST00000617172 WDR64B1ANS9 1081 aa10.95□□□□□ -0.66
TARDBP-218ENST00000617172 MAGEB2O15479 319 aa10.95□□□□□ -0.66
TARDBP-218ENST00000617172 RB1P06400 928 aa10.95□□□□□ -0.66
TARDBP-218ENST00000617172 STAG3L1P0CL83 205 aa10.95□□□□□ -0.66
TARDBP-218ENST00000617172 BMP1P13497 986 aa10.95□□□□□ -0.66
TARDBP-218ENST00000617172 XBP1P17861 261 aa10.95□□□□□ -0.66
TARDBP-218ENST00000617172 SFNP31947 248 aa10.95□□□□□ -0.66
TARDBP-218ENST00000617172 ANAPC15P60006 121 aa10.95□□□□□ -0.66
TARDBP-218ENST00000617172 PAK2Q13177 524 aa10.95□□□□□ -0.66
TARDBP-218ENST00000617172 ANKRD1Q15327 319 aa10.95□□□□□ -0.66
TARDBP-218ENST00000617172 SPRED2Q7Z698 418 aa10.95□□□□□ -0.66
TARDBP-218ENST00000617172 CCDC60Q8IWA6 550 aaPredicted RBP10.95□□□□□ -0.66
TARDBP-218ENST00000617172 KIAA0319LQ8IZA0 1049 aa10.95□□□□□ -0.66
TARDBP-218ENST00000617172 RASGRP4Q8TDF6 673 aa10.95□□□□□ -0.66
TARDBP-218ENST00000617172 GDPD5Q8WTR4 605 aa10.95□□□□□ -0.66
TARDBP-218ENST00000617172 TRAPPC12Q8WVT3 735 aa10.95□□□□□ -0.66
TARDBP-218ENST00000617172 MRPL38Q96DV4 380 aaKnown RBP10.95□□□□□ -0.66
TARDBP-218ENST00000617172 UHRF1Q96T88 793 aaPredicted RBP10.95□□□□□ -0.66
TARDBP-218ENST00000617172 UPF3BQ9BZI7 483 aaKnown RBP10.95□□□□□ -0.66
TARDBP-218ENST00000617172 SLKQ9H2G2 1235 aaPredicted RBP10.95□□□□□ -0.66
TARDBP-218ENST00000617172 AGO3Q9H9G7 860 aaKnown RBP10.95□□□□□ -0.66
TARDBP-218ENST00000617172 NRBP2Q9NSY0 501 aa10.95□□□□□ -0.66
TARDBP-218ENST00000617172 PADI3Q9ULW8 664 aa10.95□□□□□ -0.66
TARDBP-218ENST00000617172 XIRP2A4UGR9 3374 aa10.94□□□□□ -0.66
TARDBP-218ENST00000617172 GBF1Q92538 1859 aa10.94□□□□□ -0.66
TARDBP-218ENST00000617172 CYP3A7-CYP3A51PA0A087WV96 503 aa10.94□□□□□ -0.66
TARDBP-218ENST00000617172 C5orf67F2Z3F1 127 aa10.94□□□□□ -0.66
TARDBP-218ENST00000617172 ADAMTS3O15072 1205 aa10.94□□□□□ -0.66
TARDBP-218ENST00000617172 GPR182O15218 404 aa10.94□□□□□ -0.66
TARDBP-218ENST00000617172 GAS7O60861 476 aa10.94□□□□□ -0.66
TARDBP-218ENST00000617172 PPFIA3O75145 1194 aa10.94□□□□□ -0.66
TARDBP-218ENST00000617172 DGKIO75912 1065 aa10.94□□□□□ -0.66
TARDBP-218ENST00000617172 CYP3A7P24462 503 aa10.94□□□□□ -0.66
TARDBP-218ENST00000617172 TMOD1P28289 359 aa10.94□□□□□ -0.66
TARDBP-218ENST00000617172 CD52P31358 61 aa10.94□□□□□ -0.66
TARDBP-218ENST00000617172 BMPR1AP36894 532 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms