RNA–Protein interactions for RNA: ENST00000617039.4

TNFRSF11A-206, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 3,756 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-206ENST00000617039 RCAN1P53805 252 aa16.18■□□□□ 0.18
TNFRSF11A-206ENST00000617039 NLRP4Q96MN2 994 aa16.18■□□□□ 0.18
TNFRSF11A-206ENST00000617039 MTA3Q9BTC8 594 aa16.18■□□□□ 0.18
TNFRSF11A-206ENST00000617039 PI4K2AQ9BTU6 479 aa16.18■□□□□ 0.18
TNFRSF11A-206ENST00000617039 SARSP49591 514 aaKnown RBP16.18■□□□□ 0.18
TNFRSF11A-206ENST00000617039 TNFAIP1Q13829 316 aa16.18■□□□□ 0.18
TNFRSF11A-206ENST00000617039 CFAP58Q5T655 872 aa16.18■□□□□ 0.18
TNFRSF11A-206ENST00000617039 HHIPL2Q6UWX4 724 aa16.18■□□□□ 0.18
TNFRSF11A-206ENST00000617039 NXF1Q9UBU9 619 aaKnown RBP16.18■□□□□ 0.18
TNFRSF11A-206ENST00000617039 CSADQ9Y600 493 aa16.18■□□□□ 0.18
TNFRSF11A-206ENST00000617039 INO80B-WBP1J3KQ70 363 aa16.17■□□□□ 0.18
TNFRSF11A-206ENST00000617039 KRIT1O00522 736 aa16.17■□□□□ 0.18
TNFRSF11A-206ENST00000617039 LIG4P49917 911 aa16.17■□□□□ 0.18
TNFRSF11A-206ENST00000617039 SMAD1Q15797 465 aaKnown RBP16.17■□□□□ 0.18
TNFRSF11A-206ENST00000617039 TTI2Q6NXR4 508 aa16.17■□□□□ 0.18
TNFRSF11A-206ENST00000617039 THNSL1Q8IYQ7 743 aa16.17■□□□□ 0.18
TNFRSF11A-206ENST00000617039 COG1Q8WTW3 980 aa16.17■□□□□ 0.18
TNFRSF11A-206ENST00000617039 CNKSR2Q8WXI2 1034 aa16.17■□□□□ 0.18
TNFRSF11A-206ENST00000617039 SELENOSQ9BQE4 189 aa16.17■□□□□ 0.18
TNFRSF11A-206ENST00000617039 INO80BQ9C086 356 aaPredicted RBP16.17■□□□□ 0.18
TNFRSF11A-206ENST00000617039 BLOC1S4Q9NUP1 217 aa16.17■□□□□ 0.18
TNFRSF11A-206ENST00000617039 LIMA1Q9UHB6 759 aaKnown RBP16.17■□□□□ 0.18
TNFRSF11A-206ENST00000617039 ZNRF3Q9ULT6 936 aa16.17■□□□□ 0.18
TNFRSF11A-206ENST00000617039 FHOD1Q9Y613 1164 aa16.17■□□□□ 0.18
TNFRSF11A-206ENST00000617039 BAZ2AQ9UIF9 1905 aaKnown RBP16.17■□□□□ 0.18
TNFRSF11A-206ENST00000617039 IFNB1P01574 187 aa16.17■□□□□ 0.18
TNFRSF11A-206ENST00000617039 H2AFZP0C0S5 128 aa16.17■□□□□ 0.18
TNFRSF11A-206ENST00000617039 RPS6P62753 249 aaKnown RBP16.17■□□□□ 0.18
TNFRSF11A-206ENST00000617039 H2AFVQ71UI9 128 aa16.17■□□□□ 0.18
TNFRSF11A-206ENST00000617039 TXLNBQ8N3L3 684 aa16.17■□□□□ 0.18
TNFRSF11A-206ENST00000617039 TMEM143Q96AN5 459 aa16.17■□□□□ 0.18
TNFRSF11A-206ENST00000617039 IFT74Q96LB3 600 aa16.17■□□□□ 0.18
TNFRSF11A-206ENST00000617039 GGA3Q9NZ52 723 aa16.17■□□□□ 0.18
TNFRSF11A-206ENST00000617039 HIP1RO75146 1068 aa16.17■□□□□ 0.18
TNFRSF11A-206ENST00000617039 GCFC2P16383 781 aaKnown RBP16.17■□□□□ 0.18
TNFRSF11A-206ENST00000617039 JAG1P78504 1218 aa16.17■□□□□ 0.18
TNFRSF11A-206ENST00000617039 E2F4Q16254 413 aa16.17■□□□□ 0.18
TNFRSF11A-206ENST00000617039 HP1BP3Q5SSJ5 553 aaPredicted RBP16.17■□□□□ 0.18
TNFRSF11A-206ENST00000617039 CCDC51Q96ER9 411 aa16.17■□□□□ 0.18
TNFRSF11A-206ENST00000617039 KBTBD4Q9NVX7 518 aa16.17■□□□□ 0.18
TNFRSF11A-206ENST00000617039 CAPN6Q9Y6Q1 641 aa16.17■□□□□ 0.18
TNFRSF11A-206ENST00000617039 PIK3R2O00459 728 aa16.16■□□□□ 0.18
TNFRSF11A-206ENST00000617039 CYP11B2P19099 503 aa16.16■□□□□ 0.18
TNFRSF11A-206ENST00000617039 SESTD1Q86VW0 696 aa16.16■□□□□ 0.18
TNFRSF11A-206ENST00000617039 TICAM2Q86XR7 235 aa16.16■□□□□ 0.18
TNFRSF11A-206ENST00000617039 RTKN2Q8IZC4 609 aa16.16■□□□□ 0.18
TNFRSF11A-206ENST00000617039 TRIM58Q8NG06 486 aa16.16■□□□□ 0.18
TNFRSF11A-206ENST00000617039 SLC30A5Q8TAD4 765 aa16.16■□□□□ 0.18
TNFRSF11A-206ENST00000617039 SELENOOQ9BVL4 669 aa16.16■□□□□ 0.18
TNFRSF11A-206ENST00000617039 NFU1Q9UMS0 254 aa16.16■□□□□ 0.18
TNFRSF11A-206ENST00000617039 GOLGA6BA6NDN3 693 aa16.16■□□□□ 0.18
TNFRSF11A-206ENST00000617039 SLCO1A2P46721 670 aa16.16■□□□□ 0.18
TNFRSF11A-206ENST00000617039 ACOT2P49753 483 aa16.16■□□□□ 0.18
TNFRSF11A-206ENST00000617039 KNOP1Q1ED39 458 aaKnown RBP16.16■□□□□ 0.18
TNFRSF11A-206ENST00000617039 RNF169Q8NCN4 708 aa16.16■□□□□ 0.18
TNFRSF11A-206ENST00000617039 DEPTORQ8TB45 409 aa16.16■□□□□ 0.18
TNFRSF11A-206ENST00000617039 MGARPQ8TDB4 240 aa16.16■□□□□ 0.18
TNFRSF11A-206ENST00000617039 NACC1Q96RE7 527 aa16.16■□□□□ 0.18
TNFRSF11A-206ENST00000617039 DUSP9Q99956 384 aaKnown RBP16.16■□□□□ 0.18
TNFRSF11A-206ENST00000617039 FAM213AQ9BRX8 229 aa16.16■□□□□ 0.18
TNFRSF11A-206ENST00000617039 GLT8D2Q9H1C3 349 aa16.16■□□□□ 0.18
TNFRSF11A-206ENST00000617039 KMT5AQ9NQR1 393 aa16.16■□□□□ 0.18
TNFRSF11A-206ENST00000617039 DNAJC12Q9UKB3 198 aa16.16■□□□□ 0.18
TNFRSF11A-206ENST00000617039 WNT10BO00744 389 aa16.16■□□□□ 0.18
TNFRSF11A-206ENST00000617039 MYL7Q01449 175 aa16.16■□□□□ 0.18
TNFRSF11A-206ENST00000617039 PPP1R7Q15435 360 aa16.16■□□□□ 0.18
TNFRSF11A-206ENST00000617039 DDX47Q9H0S4 455 aaKnown RBP16.16■□□□□ 0.18
TNFRSF11A-206ENST00000617039 MYOZ2Q9NPC6 264 aa16.16■□□□□ 0.18
TNFRSF11A-206ENST00000617039 C5P01031 1676 aa16.16■□□□□ 0.18
TNFRSF11A-206ENST00000617039 STRN3Q13033 797 aa16.15■□□□□ 0.18
TNFRSF11A-206ENST00000617039 CFAP221Q4G0U5 840 aa16.15■□□□□ 0.18
TNFRSF11A-206ENST00000617039 MOB2Q70IA6 237 aa16.15■□□□□ 0.18
TNFRSF11A-206ENST00000617039 HAS1Q92839 578 aa16.15■□□□□ 0.18
TNFRSF11A-206ENST00000617039 PHLPP2Q6ZVD8 1323 aa16.15■□□□□ 0.18
TNFRSF11A-206ENST00000617039 SH3BP5LQ7L8J4 393 aa16.15■□□□□ 0.18
TNFRSF11A-206ENST00000617039 DCAF4Q8WV16 495 aa16.15■□□□□ 0.18
TNFRSF11A-206ENST00000617039 HAUS1Q96CS2 278 aa16.15■□□□□ 0.18
TNFRSF11A-206ENST00000617039 ZDHHC15Q96MV8 337 aa16.15■□□□□ 0.18
TNFRSF11A-206ENST00000617039 CUEDC2Q9H467 287 aa16.15■□□□□ 0.18
TNFRSF11A-206ENST00000617039 RIOX1Q9H6W3 641 aa16.15■□□□□ 0.18
TNFRSF11A-206ENST00000617039 DNAJC18Q9H819 358 aa16.15■□□□□ 0.18
TNFRSF11A-206ENST00000617039 PRRC2BQ5JSZ5 2229 aaKnown RBP16.15■□□□□ 0.18
TNFRSF11A-206ENST00000617039 TADA3O75528 432 aa16.15■□□□□ 0.18
TNFRSF11A-206ENST00000617039 HEXIM1O94992 359 aaKnown RBP16.15■□□□□ 0.18
TNFRSF11A-206ENST00000617039 DDX42Q86XP3 938 aaKnown RBP eCLIP16.15■□□□□ 0.18
TNFRSF11A-206ENST00000617039 PRPF38AQ8NAV1 312 aaKnown RBP16.15■□□□□ 0.18
TNFRSF11A-206ENST00000617039 MMTAG2Q9BU76 263 aaKnown RBP16.15■□□□□ 0.18
TNFRSF11A-206ENST00000617039 KCNH7Q9NS40 1196 aa16.15■□□□□ 0.18
TNFRSF11A-206ENST00000617039 HACL1Q9UJ83 578 aa16.15■□□□□ 0.18
TNFRSF11A-206ENST00000617039 ZSCAN5CA6NGD5 496 aaPredicted RBP16.14■□□□□ 0.18
TNFRSF11A-206ENST00000617039 SPDYE2BA6NHP3 402 aa16.14■□□□□ 0.18
TNFRSF11A-206ENST00000617039 SPDYE6P0CI01 402 aa16.14■□□□□ 0.18
TNFRSF11A-206ENST00000617039 PSMC2P35998 433 aaKnown RBP16.14■□□□□ 0.18
TNFRSF11A-206ENST00000617039 TFAMQ00059 246 aaKnown RBP16.14■□□□□ 0.18
TNFRSF11A-206ENST00000617039 CCDC105Q8IYK2 499 aa16.14■□□□□ 0.18
TNFRSF11A-206ENST00000617039 GUF1Q8N442 669 aaKnown RBP16.14■□□□□ 0.18
TNFRSF11A-206ENST00000617039 PNKPQ96T60 521 aa16.14■□□□□ 0.18
TNFRSF11A-206ENST00000617039 HEMGNQ9BXL5 484 aa16.14■□□□□ 0.18
TNFRSF11A-206ENST00000617039 IMPG2Q9BZV3 1241 aa16.14■□□□□ 0.18
TNFRSF11A-206ENST00000617039 YDJCA8MPS7 323 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms