RNA–Protein interactions for RNA: ENST00000616865.4

UBXN1-218, Transcript of UBX domain protein 1, humanhuman

TSL 5 BASIC

Gene UBXN1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-218ENST00000616865 LEXMQ3ZCV2 418 aa16.86■□□□□ 0.29
UBXN1-218ENST00000616865 TEX2Q8IWB9 1127 aa16.86■□□□□ 0.29
UBXN1-218ENST00000616865 ATG2AQ2TAZ0 1938 aa16.86■□□□□ 0.29
UBXN1-218ENST00000616865 GPR37L1O60883 481 aa16.85■□□□□ 0.29
UBXN1-218ENST00000616865 STAM2O75886 525 aa16.85■□□□□ 0.29
UBXN1-218ENST00000616865 CTSHP09668 335 aa16.85■□□□□ 0.29
UBXN1-218ENST00000616865 SYT1P21579 422 aa16.85■□□□□ 0.29
UBXN1-218ENST00000616865 KCNA5P22460 613 aa16.85■□□□□ 0.29
UBXN1-218ENST00000616865 MRPS9P82933 396 aaKnown RBP16.85■□□□□ 0.29
UBXN1-218ENST00000616865 USP17L6PQ6QN14 398 aa16.85■□□□□ 0.29
UBXN1-218ENST00000616865 METTL7BQ6UX53 244 aa16.85■□□□□ 0.29
UBXN1-218ENST00000616865 DIS3L2Q8IYB7 885 aaKnown RBP16.85■□□□□ 0.29
UBXN1-218ENST00000616865 SEPT8Q92599 483 aa16.85■□□□□ 0.29
UBXN1-218ENST00000616865 MRPL38Q96DV4 380 aaKnown RBP16.85■□□□□ 0.29
UBXN1-218ENST00000616865 SAMD11Q96NU1 681 aa16.85■□□□□ 0.29
UBXN1-218ENST00000616865 INPP4AQ96PE3 977 aaPredicted RBP16.85■□□□□ 0.29
UBXN1-218ENST00000616865 RNPEPQ9H4A4 650 aa16.85■□□□□ 0.29
UBXN1-218ENST00000616865 BCAS3Q9H6U6 928 aa16.85■□□□□ 0.29
UBXN1-218ENST00000616865 CCDC194A0A1B0GVG4 234 aa16.84■□□□□ 0.29
UBXN1-218ENST00000616865 PI4K2BG5E9Z4 385 aa16.84■□□□□ 0.29
UBXN1-218ENST00000616865 PIK3CDO00329 1044 aa16.84■□□□□ 0.29
UBXN1-218ENST00000616865 STX6O43752 255 aa16.84■□□□□ 0.29
UBXN1-218ENST00000616865 FOSP01100 380 aaPredicted RBP16.84■□□□□ 0.29
UBXN1-218ENST00000616865 IL9P15248 144 aa16.84■□□□□ 0.29
UBXN1-218ENST00000616865 ICAM3P32942 547 aa16.84■□□□□ 0.29
UBXN1-218ENST00000616865 NEDD9Q14511 834 aa16.84■□□□□ 0.29
UBXN1-218ENST00000616865 EPC2Q52LR7 807 aa16.84■□□□□ 0.29
UBXN1-218ENST00000616865 TIGD5Q53EQ6 642 aa16.84■□□□□ 0.29
UBXN1-218ENST00000616865 JAKMIP3Q5VZ66 844 aa16.84■□□□□ 0.29
UBXN1-218ENST00000616865 FAM178BQ8IXR5 827 aa16.84■□□□□ 0.29
UBXN1-218ENST00000616865 DAGLBQ8NCG7 672 aa16.84■□□□□ 0.29
UBXN1-218ENST00000616865 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.84■□□□□ 0.29
UBXN1-218ENST00000616865 TOP1MTQ969P6 601 aa16.84■□□□□ 0.29
UBXN1-218ENST00000616865 YME1L1Q96TA2 773 aa16.84■□□□□ 0.29
UBXN1-218ENST00000616865 OSBPL7Q9BZF2 842 aa16.84■□□□□ 0.29
UBXN1-218ENST00000616865 FAM86C2PA6NEL3 165 aa16.83■□□□□ 0.28
UBXN1-218ENST00000616865 MEIS2O14770 477 aa16.83■□□□□ 0.28
UBXN1-218ENST00000616865 FIBPO43427 364 aa16.83■□□□□ 0.28
UBXN1-218ENST00000616865 HOXD11P31277 338 aaPredicted RBP16.83■□□□□ 0.28
UBXN1-218ENST00000616865 SEMA3FQ13275 785 aa16.83■□□□□ 0.28
UBXN1-218ENST00000616865 AP3B2Q13367 1082 aa16.83■□□□□ 0.28
UBXN1-218ENST00000616865 PTPROQ16827 1216 aa16.83■□□□□ 0.28
UBXN1-218ENST00000616865 CYFIP1Q7L576 1253 aa16.83■□□□□ 0.28
UBXN1-218ENST00000616865 TRIM50Q86XT4 487 aa16.83■□□□□ 0.28
UBXN1-218ENST00000616865 APBB2Q92870 758 aa16.83■□□□□ 0.28
UBXN1-218ENST00000616865 GPR20Q99678 358 aa16.83■□□□□ 0.28
UBXN1-218ENST00000616865 TMEM260Q9NX78 707 aa16.83■□□□□ 0.28
UBXN1-218ENST00000616865 ZNF215Q9UL58 517 aaPredicted RBP16.83■□□□□ 0.28
UBXN1-218ENST00000616865 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.82■□□□□ 0.28
UBXN1-218ENST00000616865 SPATA31C2B4DYI2 1134 aa16.82■□□□□ 0.28
UBXN1-218ENST00000616865 H3BNC9 293 aa16.82■□□□□ 0.28
UBXN1-218ENST00000616865 UPP2O95045 317 aa16.82■□□□□ 0.28
UBXN1-218ENST00000616865 GNAT1P11488 350 aa16.82■□□□□ 0.28
UBXN1-218ENST00000616865 PTCRAQ6ISU1 281 aaPredicted RBP16.82■□□□□ 0.28
UBXN1-218ENST00000616865 KRT25Q7Z3Z0 450 aa16.82■□□□□ 0.28
UBXN1-218ENST00000616865 GJD3Q8N144 294 aa16.82■□□□□ 0.28
UBXN1-218ENST00000616865 NEK9Q8TD19 979 aa16.82■□□□□ 0.28
UBXN1-218ENST00000616865 RASGRP4Q8TDF6 673 aa16.82■□□□□ 0.28
UBXN1-218ENST00000616865 FOXP1Q9H334 677 aaPredicted RBP16.82■□□□□ 0.28
UBXN1-218ENST00000616865 SETD4Q9NVD3 440 aa16.82■□□□□ 0.28
UBXN1-218ENST00000616865 PCDHA6Q9UN73 950 aa16.82■□□□□ 0.28
UBXN1-218ENST00000616865 PCDHA8Q9Y5H6 950 aa16.82■□□□□ 0.28
UBXN1-218ENST00000616865 BTBD18B2RXH4 712 aa16.81■□□□□ 0.28
UBXN1-218ENST00000616865 ADAM17P78536 824 aa16.81■□□□□ 0.28
UBXN1-218ENST00000616865 GPM6BQ13491 265 aa16.81■□□□□ 0.28
UBXN1-218ENST00000616865 NONOQ15233 471 aaKnown RBP eCLIP16.81■□□□□ 0.28
UBXN1-218ENST00000616865 FOXD4L5Q5VV16 416 aaPredicted RBP16.81■□□□□ 0.28
UBXN1-218ENST00000616865 TMEM192Q8IY95 271 aa16.81■□□□□ 0.28
UBXN1-218ENST00000616865 BANK1Q8NDB2 785 aa16.81■□□□□ 0.28
UBXN1-218ENST00000616865 OXER1Q8TDS5 423 aa16.81■□□□□ 0.28
UBXN1-218ENST00000616865 LMBR1Q8WVP7 490 aa16.81■□□□□ 0.28
UBXN1-218ENST00000616865 FOXD4L4Q8WXT5 416 aaPredicted RBP16.81■□□□□ 0.28
UBXN1-218ENST00000616865 ANO3Q9BYT9 981 aa16.81■□□□□ 0.28
UBXN1-218ENST00000616865 IFIH1Q9BYX4 1025 aaKnown RBP16.81■□□□□ 0.28
UBXN1-218ENST00000616865 RTEL1Q9NZ71 1219 aa16.81■□□□□ 0.28
UBXN1-218ENST00000616865 GRXCR2A6NFK2 248 aa16.8■□□□□ 0.28
UBXN1-218ENST00000616865 SSTR3P32745 418 aaPredicted RBP16.8■□□□□ 0.28
UBXN1-218ENST00000616865 CLK2P49760 499 aaKnown RBP16.8■□□□□ 0.28
UBXN1-218ENST00000616865 ARHGAP4P98171 946 aa16.8■□□□□ 0.28
UBXN1-218ENST00000616865 NR5A1Q13285 461 aa16.8■□□□□ 0.28
UBXN1-218ENST00000616865 PUS10Q3MIT2 529 aaKnown RBP16.8■□□□□ 0.28
UBXN1-218ENST00000616865 FAM26DQ5JW98 314 aa16.8■□□□□ 0.28
UBXN1-218ENST00000616865 PCNX4Q63HM2 1172 aa16.8■□□□□ 0.28
UBXN1-218ENST00000616865 PIK3AP1Q6ZUJ8 805 aa16.8■□□□□ 0.28
UBXN1-218ENST00000616865 PABPC5Q96DU9 382 aaKnown RBP16.8■□□□□ 0.28
UBXN1-218ENST00000616865 PGBD1Q96JS3 809 aa16.8■□□□□ 0.28
UBXN1-218ENST00000616865 MTMR6Q9Y217 621 aa16.8■□□□□ 0.28
UBXN1-218ENST00000616865 TELO2Q9Y4R8 837 aa16.8■□□□□ 0.28
UBXN1-218ENST00000616865 KAT6AQ92794 2004 aa16.8■□□□□ 0.28
UBXN1-218ENST00000616865 H3BQ06 376 aaPredicted RBP16.79■□□□□ 0.28
UBXN1-218ENST00000616865 ZSCAN22P10073 491 aaPredicted RBP16.79■□□□□ 0.28
UBXN1-218ENST00000616865 ZNF76P36508 570 aa16.79■□□□□ 0.28
UBXN1-218ENST00000616865 NUCB2P80303 420 aa16.79■□□□□ 0.28
UBXN1-218ENST00000616865 SP4Q02446 784 aa16.79■□□□□ 0.28
UBXN1-218ENST00000616865 COL19A1Q14993 1142 aa16.79■□□□□ 0.28
UBXN1-218ENST00000616865 NPY5RQ15761 445 aa16.79■□□□□ 0.28
UBXN1-218ENST00000616865 TCEAL5Q5H9L2 206 aa16.79■□□□□ 0.28
UBXN1-218ENST00000616865 UTP14CQ5TAP6 766 aaKnown RBP16.79■□□□□ 0.28
UBXN1-218ENST00000616865 FERMT3Q86UX7 667 aa16.79■□□□□ 0.28
UBXN1-218ENST00000616865 NOSTRINQ8IVI9 506 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms