RNA–Protein interactions for RNA: ENST00000616701.4

SEMA3B-212, Transcript of semaphorin 3B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SEMA3B, Length 2,958 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-212ENST00000616701 LTBP3Q9NS15 1303 aa17.17■□□□□ 0.34
SEMA3B-212ENST00000616701 CLIC2O15247 247 aa17.17■□□□□ 0.34
SEMA3B-212ENST00000616701 BACE1P56817 501 aa17.17■□□□□ 0.34
SEMA3B-212ENST00000616701 MRPS9P82933 396 aaKnown RBP17.17■□□□□ 0.34
SEMA3B-212ENST00000616701 SATB1Q01826 763 aa17.17■□□□□ 0.34
SEMA3B-212ENST00000616701 LXNQ9BS40 222 aa17.17■□□□□ 0.34
SEMA3B-212ENST00000616701 SIK3Q9Y2K2 1263 aa17.17■□□□□ 0.34
SEMA3B-212ENST00000616701 SAMM50Q9Y512 469 aa17.17■□□□□ 0.34
SEMA3B-212ENST00000616701 NR2F2P24468 414 aa17.16■□□□□ 0.34
SEMA3B-212ENST00000616701 ZC2HC1CQ53FD0 456 aaPredicted RBP17.16■□□□□ 0.34
SEMA3B-212ENST00000616701 MYCT1Q8N699 235 aa17.16■□□□□ 0.34
SEMA3B-212ENST00000616701 ZNF280CQ8ND82 737 aa17.16■□□□□ 0.34
SEMA3B-212ENST00000616701 PEX10O60683 326 aa17.16■□□□□ 0.34
SEMA3B-212ENST00000616701 ZBED4O75132 1171 aa17.16■□□□□ 0.34
SEMA3B-212ENST00000616701 FAM13AO94988 1023 aa17.16■□□□□ 0.34
SEMA3B-212ENST00000616701 TFRCP02786 760 aaKnown RBP17.16■□□□□ 0.34
SEMA3B-212ENST00000616701 PLS1Q14651 629 aa17.16■□□□□ 0.34
SEMA3B-212ENST00000616701 ERO1AQ96HE7 468 aa17.16■□□□□ 0.34
SEMA3B-212ENST00000616701 NLRC4Q9NPP4 1024 aa17.16■□□□□ 0.34
SEMA3B-212ENST00000616701 GPRC5DQ9NZD1 345 aa17.16■□□□□ 0.34
SEMA3B-212ENST00000616701 GUCA1BQ9UMX6 200 aa17.16■□□□□ 0.34
SEMA3B-212ENST00000616701 TMEM150BA6NC51 233 aa17.16■□□□□ 0.34
SEMA3B-212ENST00000616701 VWA5AO00534 786 aa17.16■□□□□ 0.34
SEMA3B-212ENST00000616701 KIF5CO60282 957 aa17.16■□□□□ 0.34
SEMA3B-212ENST00000616701 ZBED6P86452 979 aa17.16■□□□□ 0.34
SEMA3B-212ENST00000616701 CYP27A1Q02318 531 aa17.16■□□□□ 0.34
SEMA3B-212ENST00000616701 ITGB3BPQ13352 177 aaPredicted RBP17.16■□□□□ 0.34
SEMA3B-212ENST00000616701 SLC35F6Q8N357 371 aa17.16■□□□□ 0.34
SEMA3B-212ENST00000616701 NUP58Q9BVL2 599 aa17.16■□□□□ 0.34
SEMA3B-212ENST00000616701 SORBS3O60504 671 aa17.15■□□□□ 0.34
SEMA3B-212ENST00000616701 ARHGAP25P42331 645 aa17.15■□□□□ 0.34
SEMA3B-212ENST00000616701 KCNMA1Q12791 1236 aa17.15■□□□□ 0.34
SEMA3B-212ENST00000616701 TKFCQ3LXA3 575 aa17.15■□□□□ 0.34
SEMA3B-212ENST00000616701 RRAGAQ7L523 313 aa17.15■□□□□ 0.34
SEMA3B-212ENST00000616701 ZSWIM4Q9H7M6 989 aa17.15■□□□□ 0.34
SEMA3B-212ENST00000616701 NHEJ1Q9H9Q4 299 aaPredicted RBP17.15■□□□□ 0.34
SEMA3B-212ENST00000616701 TUFT1Q9NNX1 390 aa17.15■□□□□ 0.34
SEMA3B-212ENST00000616701 ZNHIT6Q9NWK9 470 aaKnown RBP17.15■□□□□ 0.34
SEMA3B-212ENST00000616701 SLC26A4O43511 780 aa17.15■□□□□ 0.34
SEMA3B-212ENST00000616701 DDNO94850 711 aaPredicted RBP17.15■□□□□ 0.34
SEMA3B-212ENST00000616701 TUBB4AP04350 444 aa17.15■□□□□ 0.34
SEMA3B-212ENST00000616701 SETQ01105 290 aaPredicted RBP17.15■□□□□ 0.34
SEMA3B-212ENST00000616701 MIER3Q7Z3K6 550 aa17.15■□□□□ 0.34
SEMA3B-212ENST00000616701 MCF2L2Q86YR7 1114 aa17.15■□□□□ 0.34
SEMA3B-212ENST00000616701 HERVK_113P62684 666 aa17.14■□□□□ 0.33
SEMA3B-212ENST00000616701 BAATQ14032 418 aaPredicted RBP17.14■□□□□ 0.33
SEMA3B-212ENST00000616701 KNOP1Q1ED39 458 aaKnown RBP17.14■□□□□ 0.33
SEMA3B-212ENST00000616701 RNF207Q6ZRF8 634 aa17.14■□□□□ 0.33
SEMA3B-212ENST00000616701 C1orf186Q6ZWK4 172 aa17.14■□□□□ 0.33
SEMA3B-212ENST00000616701 KRT26Q7Z3Y9 468 aa17.14■□□□□ 0.33
SEMA3B-212ENST00000616701 RMDN3Q96TC7 470 aa17.14■□□□□ 0.33
SEMA3B-212ENST00000616701 EPC1Q9H2F5 836 aa17.14■□□□□ 0.33
SEMA3B-212ENST00000616701 RNF146Q9NTX7 359 aa17.14■□□□□ 0.33
SEMA3B-212ENST00000616701 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.14■□□□□ 0.338e-7■■□□□ 11.8
SEMA3B-212ENST00000616701 TESPA1A2RU30 521 aaPredicted RBP17.14■□□□□ 0.33
SEMA3B-212ENST00000616701 USP14P54578 494 aa17.14■□□□□ 0.33
SEMA3B-212ENST00000616701 MNS1Q8NEH6 495 aa17.14■□□□□ 0.33
SEMA3B-212ENST00000616701 NEK11Q8NG66 645 aa17.14■□□□□ 0.33
SEMA3B-212ENST00000616701 POLR2AP24928 1970 aaKnown RBP17.14■□□□□ 0.33
SEMA3B-212ENST00000616701 RPTORQ8N122 1335 aa17.14■□□□□ 0.33
SEMA3B-212ENST00000616701 LRRC53A6NM62 1247 aa17.13■□□□□ 0.33
SEMA3B-212ENST00000616701 CETN3O15182 167 aa17.13■□□□□ 0.33
SEMA3B-212ENST00000616701 ATP9AO75110 1047 aa17.13■□□□□ 0.33
SEMA3B-212ENST00000616701 GUCY2CP25092 1073 aa17.13■□□□□ 0.33
SEMA3B-212ENST00000616701 CASP4P49662 377 aa17.13■□□□□ 0.33
SEMA3B-212ENST00000616701 MTMR1Q13613 665 aa17.13■□□□□ 0.33
SEMA3B-212ENST00000616701 EPHA7Q15375 998 aa17.13■□□□□ 0.33
SEMA3B-212ENST00000616701 SNRNP48Q6IEG0 339 aaKnown RBP17.13■□□□□ 0.33
SEMA3B-212ENST00000616701 APOBEC3FQ8IUX4 373 aaKnown RBP17.13■□□□□ 0.33
SEMA3B-212ENST00000616701 ZNF397Q8NF99 534 aaPredicted RBP17.13■□□□□ 0.33
SEMA3B-212ENST00000616701 SGSM3Q96HU1 749 aa17.13■□□□□ 0.33
SEMA3B-212ENST00000616701 LSM14BQ9BX40 385 aaKnown RBP17.13■□□□□ 0.33
SEMA3B-212ENST00000616701 LCMT1Q9UIC8 334 aa17.13■□□□□ 0.33
SEMA3B-212ENST00000616701 STK24Q9Y6E0 443 aa17.13■□□□□ 0.33
SEMA3B-212ENST00000616701 COG2Q14746 738 aa17.13■□□□□ 0.33
SEMA3B-212ENST00000616701 PGM5Q15124 567 aa17.13■□□□□ 0.33
SEMA3B-212ENST00000616701 ENOX2Q16206 610 aaKnown RBP17.13■□□□□ 0.33
SEMA3B-212ENST00000616701 AGO4Q9HCK5 861 aaKnown RBP17.13■□□□□ 0.33
SEMA3B-212ENST00000616701 RCCD1A6NED2 376 aa17.13■□□□□ 0.33
SEMA3B-212ENST00000616701 MEA1Q16626 185 aa17.13■□□□□ 0.33
SEMA3B-212ENST00000616701 ARHGEF16Q5VV41 709 aa17.13■□□□□ 0.33
SEMA3B-212ENST00000616701 EPM2AIP1Q7L775 607 aaPredicted RBP17.13■□□□□ 0.33
SEMA3B-212ENST00000616701 CACNA2D4Q7Z3S7 1137 aa17.13■□□□□ 0.33
SEMA3B-212ENST00000616701 RETREG2Q8NC44 543 aa17.13■□□□□ 0.33
SEMA3B-212ENST00000616701 NACC1Q96RE7 527 aa17.13■□□□□ 0.33
SEMA3B-212ENST00000616701 DHX15O43143 795 aaKnown RBP17.12■□□□□ 0.33
SEMA3B-212ENST00000616701 DCAF17Q5H9S7 520 aaPredicted RBP17.12■□□□□ 0.33
SEMA3B-212ENST00000616701 KIAA1328Q86T90 577 aa17.12■□□□□ 0.33
SEMA3B-212ENST00000616701 KLRG1Q96E93 195 aa17.12■□□□□ 0.33
SEMA3B-212ENST00000616701 CEP63Q96MT8 703 aa17.12■□□□□ 0.33
SEMA3B-212ENST00000616701 AS3MTQ9HBK9 375 aa17.12■□□□□ 0.33
SEMA3B-212ENST00000616701 ZNF112Q9UJU3 913 aa17.12■□□□□ 0.33
SEMA3B-212ENST00000616701 PCDHB13Q9Y5F0 798 aa17.12■□□□□ 0.33
SEMA3B-212ENST00000616701 ASTN1O14525 1302 aa17.12■□□□□ 0.33
SEMA3B-212ENST00000616701 ARHGEF35A5YM69 484 aa17.12■□□□□ 0.33
SEMA3B-212ENST00000616701 TCERG1LQ5VWI1 586 aa17.12■□□□□ 0.33
SEMA3B-212ENST00000616701 B3GNT9Q6UX72 402 aa17.12■□□□□ 0.33
SEMA3B-212ENST00000616701 TRIM59Q8IWR1 403 aa17.12■□□□□ 0.33
SEMA3B-212ENST00000616701 UBIAD1Q9Y5Z9 338 aa17.12■□□□□ 0.33
SEMA3B-212ENST00000616701 DUSP10Q9Y6W6 482 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms