RNA–Protein interactions for RNA: ENST00000616407.1

PPP4R3B-206, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,385 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-206ENST00000616407 P4HBP07237 508 aaKnown RBP14.36□□□□□ -0.11
PPP4R3B-206ENST00000616407 PDE6CP51160 858 aa14.36□□□□□ -0.11
PPP4R3B-206ENST00000616407 PPFIA1Q13136 1202 aa14.36□□□□□ -0.11
PPP4R3B-206ENST00000616407 MESDQ14696 234 aa14.36□□□□□ -0.11
PPP4R3B-206ENST00000616407 SNRNP48Q6IEG0 339 aaKnown RBP14.36□□□□□ -0.11
PPP4R3B-206ENST00000616407 PAXIP1Q6ZW49 1069 aaPredicted RBP14.36□□□□□ -0.11
PPP4R3B-206ENST00000616407 CDAN1Q8IWY9 1227 aa14.36□□□□□ -0.11
PPP4R3B-206ENST00000616407 CERS5Q8N5B7 392 aa14.36□□□□□ -0.11
PPP4R3B-206ENST00000616407 ZNF142P52746 1687 aaPredicted RBP14.36□□□□□ -0.11
PPP4R3B-206ENST00000616407 DPEP1P16444 411 aa14.36□□□□□ -0.11
PPP4R3B-206ENST00000616407 PMS1P54277 932 aaKnown RBP14.36□□□□□ -0.11
PPP4R3B-206ENST00000616407 CC2D1AQ6P1N0 951 aaPredicted RBP14.36□□□□□ -0.11
PPP4R3B-206ENST00000616407 DCUN1D2Q6PH85 259 aa14.36□□□□□ -0.11
PPP4R3B-206ENST00000616407 SH3RF1Q7Z6J0 888 aa14.36□□□□□ -0.11
PPP4R3B-206ENST00000616407 CATSPER3Q86XQ3 398 aa14.36□□□□□ -0.11
PPP4R3B-206ENST00000616407 CDHR1Q96JP9 859 aa14.36□□□□□ -0.11
PPP4R3B-206ENST00000616407 EPB41L5Q9HCM4 733 aa14.36□□□□□ -0.11
PPP4R3B-206ENST00000616407 TRPC6Q9Y210 931 aa14.36□□□□□ -0.11
PPP4R3B-206ENST00000616407 PALMO75781 387 aa14.36□□□□□ -0.11
PPP4R3B-206ENST00000616407 HEXIM1O94992 359 aaKnown RBP14.36□□□□□ -0.11
PPP4R3B-206ENST00000616407 QARSP47897 775 aaKnown RBP14.36□□□□□ -0.11
PPP4R3B-206ENST00000616407 MFAP3P55082 362 aa14.36□□□□□ -0.11
PPP4R3B-206ENST00000616407 CCDC77Q9BR77 488 aa14.36□□□□□ -0.11
PPP4R3B-206ENST00000616407 EHD4Q9H223 541 aa14.36□□□□□ -0.11
PPP4R3B-206ENST00000616407 NRBP2Q9NSY0 501 aa14.36□□□□□ -0.11
PPP4R3B-206ENST00000616407 TBC1D22BQ9NU19 505 aa14.36□□□□□ -0.11
PPP4R3B-206ENST00000616407 ASIC3Q9UHC3 531 aa14.36□□□□□ -0.11
PPP4R3B-206ENST00000616407 TFR2Q9UP52 801 aa14.36□□□□□ -0.11
PPP4R3B-206ENST00000616407 GAKO14976 1311 aa14.36□□□□□ -0.11
PPP4R3B-206ENST00000616407 DCAF8L1A6NGE4 600 aa14.35□□□□□ -0.11
PPP4R3B-206ENST00000616407 RPA1P27694 616 aa14.35□□□□□ -0.11
PPP4R3B-206ENST00000616407 EPHA7Q15375 998 aa14.35□□□□□ -0.11
PPP4R3B-206ENST00000616407 E2F4Q16254 413 aa14.35□□□□□ -0.11
PPP4R3B-206ENST00000616407 PDXDC1Q6P996 788 aa14.35□□□□□ -0.11
PPP4R3B-206ENST00000616407 ATP2C2O75185 946 aa14.35□□□□□ -0.11
PPP4R3B-206ENST00000616407 DISP2A7MBM2 1401 aa14.35□□□□□ -0.11
PPP4R3B-206ENST00000616407 ANO9A1A5B4 782 aa14.35□□□□□ -0.11
PPP4R3B-206ENST00000616407 WDR64B1ANS9 1081 aa14.35□□□□□ -0.11
PPP4R3B-206ENST00000616407 SLC16A4O15374 487 aa14.35□□□□□ -0.11
PPP4R3B-206ENST00000616407 TRIM49P0CI25 452 aa14.35□□□□□ -0.11
PPP4R3B-206ENST00000616407 TRIM49CP0CI26 452 aa14.35□□□□□ -0.11
PPP4R3B-206ENST00000616407 GCLMP48507 274 aa14.35□□□□□ -0.11
PPP4R3B-206ENST00000616407 CASP8Q14790 479 aa14.35□□□□□ -0.11
PPP4R3B-206ENST00000616407 ANKRD7Q92527 254 aa14.35□□□□□ -0.11
PPP4R3B-206ENST00000616407 NCK2O43639 380 aa14.34□□□□□ -0.11
PPP4R3B-206ENST00000616407 ERVK-24P63145 666 aa14.34□□□□□ -0.11
PPP4R3B-206ENST00000616407 LLGL1Q15334 1064 aa14.34□□□□□ -0.11
PPP4R3B-206ENST00000616407 CRY2Q49AN0 593 aa14.34□□□□□ -0.11
PPP4R3B-206ENST00000616407 ZNF365Q70YC5 407 aa14.34□□□□□ -0.11
PPP4R3B-206ENST00000616407 SLC17A8Q8NDX2 589 aa14.34□□□□□ -0.11
PPP4R3B-206ENST00000616407 GOLGA6L7A0A1B0GV03 622 aa14.34□□□□□ -0.11
PPP4R3B-206ENST00000616407 PDXKO00764 312 aa14.34□□□□□ -0.11
PPP4R3B-206ENST00000616407 C10orf76Q5T2E6 689 aa14.34□□□□□ -0.11
PPP4R3B-206ENST00000616407 DHX37Q8IY37 1157 aaKnown RBP14.34□□□□□ -0.11
PPP4R3B-206ENST00000616407 MSANTD4Q8NCY6 345 aa14.34□□□□□ -0.11
PPP4R3B-206ENST00000616407 PSAPP07602 524 aa14.34□□□□□ -0.11
PPP4R3B-206ENST00000616407 MYBP10242 640 aa14.34□□□□□ -0.11
PPP4R3B-206ENST00000616407 MIS18BP1Q6P0N0 1132 aa14.34□□□□□ -0.11
PPP4R3B-206ENST00000616407 NFRKBQ6P4R8 1299 aa14.34□□□□□ -0.11
PPP4R3B-206ENST00000616407 ZBTB8OSQ8IWT0 167 aa14.34□□□□□ -0.11
PPP4R3B-206ENST00000616407 ZNF710Q8N1W2 664 aa14.34□□□□□ -0.11
PPP4R3B-206ENST00000616407 XXYLT1Q8NBI6 393 aa14.34□□□□□ -0.11
PPP4R3B-206ENST00000616407 EDEM3Q9BZQ6 932 aa14.34□□□□□ -0.11
PPP4R3B-206ENST00000616407 SEL1LQ9UBV2 794 aa14.34□□□□□ -0.11
PPP4R3B-206ENST00000616407 MED24O75448 989 aa14.34□□□□□ -0.11
PPP4R3B-206ENST00000616407 TAL1P17542 331 aaPredicted RBP14.34□□□□□ -0.11
PPP4R3B-206ENST00000616407 CYP11B2P19099 503 aa14.34□□□□□ -0.11
PPP4R3B-206ENST00000616407 INTS8Q75QN2 995 aaKnown RBP14.34□□□□□ -0.11
PPP4R3B-206ENST00000616407 AGBL1Q96MI9 1066 aa14.34□□□□□ -0.11
PPP4R3B-206ENST00000616407 NUDT12Q9BQG2 462 aa14.34□□□□□ -0.11
PPP4R3B-206ENST00000616407 RAB17Q9H0T7 212 aa14.34□□□□□ -0.11
PPP4R3B-206ENST00000616407 TUFT1Q9NNX1 390 aa14.34□□□□□ -0.11
PPP4R3B-206ENST00000616407 MED4Q9NPJ6 270 aa14.34□□□□□ -0.11
PPP4R3B-206ENST00000616407 SCN11AQ9UI33 1791 aa14.33□□□□□ -0.11
PPP4R3B-206ENST00000616407 A0A1W2PRG0 241 aa14.33□□□□□ -0.12
PPP4R3B-206ENST00000616407 MSH4O15457 936 aa14.33□□□□□ -0.12
PPP4R3B-206ENST00000616407 GRM1Q13255 1194 aa14.33□□□□□ -0.12
PPP4R3B-206ENST00000616407 MTMR2Q13614 643 aa14.33□□□□□ -0.12
PPP4R3B-206ENST00000616407 IL17AQ16552 155 aa14.33□□□□□ -0.12
PPP4R3B-206ENST00000616407 SEMA6BQ9H3T3 888 aa14.33□□□□□ -0.12
PPP4R3B-206ENST00000616407 RPAP3Q9H6T3 665 aaPredicted RBP14.33□□□□□ -0.12
PPP4R3B-206ENST00000616407 RNF14Q9UBS8 474 aa14.33□□□□□ -0.12
PPP4R3B-206ENST00000616407 HIP1RO75146 1068 aa14.33□□□□□ -0.12
PPP4R3B-206ENST00000616407 ACTN1P12814 892 aa14.33□□□□□ -0.12
PPP4R3B-206ENST00000616407 ALCAMQ13740 583 aa14.33□□□□□ -0.12
PPP4R3B-206ENST00000616407 FRMD5Q7Z6J6 570 aa14.33□□□□□ -0.12
PPP4R3B-206ENST00000616407 NEK9Q8TD19 979 aa14.33□□□□□ -0.12
PPP4R3B-206ENST00000616407 PAIP2Q9BPZ3 127 aaKnown RBP14.33□□□□□ -0.12
PPP4R3B-206ENST00000616407 JAK3P52333 1124 aa14.33□□□□□ -0.12
PPP4R3B-206ENST00000616407 PTK2Q05397 1052 aa14.33□□□□□ -0.12
PPP4R3B-206ENST00000616407 KRT71Q3SY84 523 aa14.33□□□□□ -0.12
PPP4R3B-206ENST00000616407 DACT2Q5SW24 774 aa14.33□□□□□ -0.12
PPP4R3B-206ENST00000616407 CEP85LQ5SZL2 805 aa14.33□□□□□ -0.12
PPP4R3B-206ENST00000616407 PRAMEF18Q5VWM3 479 aa14.33□□□□□ -0.12
PPP4R3B-206ENST00000616407 DPY19L2Q6NUT2 758 aa14.33□□□□□ -0.12
PPP4R3B-206ENST00000616407 MICALL2Q8IY33 904 aa14.33□□□□□ -0.12
PPP4R3B-206ENST00000616407 FAM71BQ8TC56 605 aa14.33□□□□□ -0.12
PPP4R3B-206ENST00000616407 ERGIC2Q96RQ1 377 aa14.33□□□□□ -0.12
PPP4R3B-206ENST00000616407 L2HGDHQ9H9P8 463 aa14.33□□□□□ -0.12
PPP4R3B-206ENST00000616407 FAN1Q9Y2M0 1017 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms