RNA–Protein interactions for RNA: ENST00000615732.1

COL4A1-205, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 5

Gene COL4A1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-205ENST00000615732 CCDC194A0A1B0GVG4 234 aa12.12□□□□□ -0.47
COL4A1-205ENST00000615732 A0A1B0GVL5 298 aa12.12□□□□□ -0.47
COL4A1-205ENST00000615732 STXBP3O00186 592 aa12.12□□□□□ -0.47
COL4A1-205ENST00000615732 CYTH3O43739 400 aa12.12□□□□□ -0.47
COL4A1-205ENST00000615732 NBNO60934 754 aa12.12□□□□□ -0.47
COL4A1-205ENST00000615732 EIF3JO75822 258 aaKnown RBP12.12□□□□□ -0.47
COL4A1-205ENST00000615732 RGS20O76081 388 aa12.12□□□□□ -0.47
COL4A1-205ENST00000615732 F2P00734 622 aa12.12□□□□□ -0.47
COL4A1-205ENST00000615732 SELPP16109 830 aa12.12□□□□□ -0.47
COL4A1-205ENST00000615732 TRAPPC10P48553 1259 aa12.12□□□□□ -0.47
COL4A1-205ENST00000615732 TOB1P50616 345 aaPredicted RBP12.12□□□□□ -0.47
COL4A1-205ENST00000615732 HSD17B4P51659 736 aa12.12□□□□□ -0.47
COL4A1-205ENST00000615732 ZNF200P98182 395 aaPredicted RBP12.12□□□□□ -0.47
COL4A1-205ENST00000615732 KIAA0753Q2KHM9 967 aa12.12□□□□□ -0.47
COL4A1-205ENST00000615732 PIK3AP1Q6ZUJ8 805 aa12.12□□□□□ -0.47
COL4A1-205ENST00000615732 SESTD1Q86VW0 696 aa12.12□□□□□ -0.47
COL4A1-205ENST00000615732 CKAP2LQ8IYA6 745 aa12.12□□□□□ -0.47
COL4A1-205ENST00000615732 C7orf31Q8N865 590 aa12.12□□□□□ -0.47
COL4A1-205ENST00000615732 DAGLBQ8NCG7 672 aa12.12□□□□□ -0.47
COL4A1-205ENST00000615732 CAGE1Q8TC20 777 aa12.12□□□□□ -0.47
COL4A1-205ENST00000615732 HLA-CQ95604 372 aa12.12□□□□□ -0.47
COL4A1-205ENST00000615732 PDCD2LQ9BRP1 358 aa12.12□□□□□ -0.47
COL4A1-205ENST00000615732 PANK2Q9BZ23 570 aa12.12□□□□□ -0.47
COL4A1-205ENST00000615732 C6orf50Q9HD87 102 aa12.12□□□□□ -0.47
COL4A1-205ENST00000615732 FAM13BQ9NYF5 915 aa12.12□□□□□ -0.47
COL4A1-205ENST00000615732 MTUS1Q9ULD2 1270 aa12.12□□□□□ -0.47
COL4A1-205ENST00000615732 TRIP12Q14669 1992 aaPredicted RBP12.11□□□□□ -0.47
COL4A1-205ENST00000615732 FAM205CA6NFA0 338 aa12.11□□□□□ -0.47
COL4A1-205ENST00000615732 ZBTB5O15062 677 aa12.11□□□□□ -0.47
COL4A1-205ENST00000615732 GGPS1O95749 300 aa12.11□□□□□ -0.47
COL4A1-205ENST00000615732 CKBP12277 381 aa12.11□□□□□ -0.47
COL4A1-205ENST00000615732 PFKFB1P16118 471 aa12.11□□□□□ -0.47
COL4A1-205ENST00000615732 UBA1P22314 1058 aaKnown RBP12.11□□□□□ -0.47
COL4A1-205ENST00000615732 GNA11P29992 359 aa12.11□□□□□ -0.47
COL4A1-205ENST00000615732 SYKP43405 635 aa12.11□□□□□ -0.47
COL4A1-205ENST00000615732 NDUFA8P51970 172 aa12.11□□□□□ -0.47
COL4A1-205ENST00000615732 TYRO3Q06418 890 aa12.11□□□□□ -0.47
COL4A1-205ENST00000615732 HIC1Q14526 733 aa12.11□□□□□ -0.47
COL4A1-205ENST00000615732 PGM5Q15124 567 aa12.11□□□□□ -0.47
COL4A1-205ENST00000615732 AXDND1Q5T1B0 1012 aaPredicted RBP12.11□□□□□ -0.47
COL4A1-205ENST00000615732 FAM117BQ6P1L5 589 aa12.11□□□□□ -0.47
COL4A1-205ENST00000615732 FCHSD1Q86WN1 690 aa12.11□□□□□ -0.47
COL4A1-205ENST00000615732 DHX37Q8IY37 1157 aaKnown RBP12.11□□□□□ -0.47
COL4A1-205ENST00000615732 PPTC7Q8NI37 304 aa12.11□□□□□ -0.47
COL4A1-205ENST00000615732 TNFRSF25Q93038 417 aa12.11□□□□□ -0.47
COL4A1-205ENST00000615732 EMID1Q96A84 441 aaPredicted RBP12.11□□□□□ -0.47
COL4A1-205ENST00000615732 SPATA33Q96N06 139 aa12.11□□□□□ -0.47
COL4A1-205ENST00000615732 PIGSQ96S52 555 aa12.11□□□□□ -0.47
COL4A1-205ENST00000615732 SDF4Q9BRK5 362 aa12.11□□□□□ -0.47
COL4A1-205ENST00000615732 LRFN3Q9BTN0 628 aa12.11□□□□□ -0.47
COL4A1-205ENST00000615732 RIOX1Q9H6W3 641 aa12.11□□□□□ -0.47
COL4A1-205ENST00000615732 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.11□□□□□ -0.47
COL4A1-205ENST00000615732 PCDHB6Q9Y5E3 794 aa12.11□□□□□ -0.47
COL4A1-205ENST00000615732 PCDHA1Q9Y5I3 950 aa12.11□□□□□ -0.47
COL4A1-205ENST00000615732 KIAA1217Q5T5P2 1943 aa12.1□□□□□ -0.47
COL4A1-205ENST00000615732 SIP14410 1827 aa12.1□□□□□ -0.47
COL4A1-205ENST00000615732 HOXD11P31277 338 aaPredicted RBP12.1□□□□□ -0.47
COL4A1-205ENST00000615732 RBL2Q08999 1139 aa12.1□□□□□ -0.47
COL4A1-205ENST00000615732 CCDC173Q0VFZ6 552 aa12.1□□□□□ -0.47
COL4A1-205ENST00000615732 LAMC2Q13753 1193 aa12.1□□□□□ -0.47
COL4A1-205ENST00000615732 MBTPS1Q14703 1052 aa12.1□□□□□ -0.47
COL4A1-205ENST00000615732 ZRSR1Q15695 479 aaKnown RBP12.1□□□□□ -0.47
COL4A1-205ENST00000615732 ZNF174Q15697 407 aa12.1□□□□□ -0.47
COL4A1-205ENST00000615732 NPY5RQ15761 445 aa12.1□□□□□ -0.47
COL4A1-205ENST00000615732 TRIM71Q2Q1W2 868 aaKnown RBP12.1□□□□□ -0.47
COL4A1-205ENST00000615732 UVSSAQ2YD98 709 aa12.1□□□□□ -0.47
COL4A1-205ENST00000615732 HSDL1Q3SXM5 330 aa12.1□□□□□ -0.47
COL4A1-205ENST00000615732 ZNF618Q5T7W0 954 aa12.1□□□□□ -0.47
COL4A1-205ENST00000615732 RESP18Q5W5W9 173 aa12.1□□□□□ -0.47
COL4A1-205ENST00000615732 PPP1R18Q6NYC8 613 aa12.1□□□□□ -0.47
COL4A1-205ENST00000615732 CNKSR3Q6P9H4 555 aa12.1□□□□□ -0.47
COL4A1-205ENST00000615732 RBM43Q6ZSC3 357 aaKnown RBP12.1□□□□□ -0.47
COL4A1-205ENST00000615732 KRT25Q7Z3Z0 450 aa12.1□□□□□ -0.47
COL4A1-205ENST00000615732 FMR1NBQ8N0W7 255 aaPredicted RBP12.1□□□□□ -0.47
COL4A1-205ENST00000615732 ENGASEQ8NFI3 743 aa12.1□□□□□ -0.47
COL4A1-205ENST00000615732 MTMR8Q96EF0 704 aa12.1□□□□□ -0.47
COL4A1-205ENST00000615732 ZBED2Q9BTP6 218 aa12.1□□□□□ -0.47
COL4A1-205ENST00000615732 FUCA2Q9BTY2 467 aa12.1□□□□□ -0.47
COL4A1-205ENST00000615732 KATNAL1Q9BW62 490 aa12.1□□□□□ -0.47
COL4A1-205ENST00000615732 BCAS3Q9H6U6 928 aa12.1□□□□□ -0.47
COL4A1-205ENST00000615732 C11orf16Q9NQ32 467 aa12.1□□□□□ -0.47
COL4A1-205ENST00000615732 MORC2Q9Y6X9 1032 aaPredicted RBP12.1□□□□□ -0.47
COL4A1-205ENST00000615732 SMCO2A6NFE2 343 aa12.09□□□□□ -0.47
COL4A1-205ENST00000615732 HAS3O00219 553 aa12.09□□□□□ -0.47
COL4A1-205ENST00000615732 ZNF202O95125 648 aa12.09□□□□□ -0.47
COL4A1-205ENST00000615732 CXCL10P02778 98 aa12.09□□□□□ -0.47
COL4A1-205ENST00000615732 ADCY7P51828 1080 aa12.09□□□□□ -0.47
COL4A1-205ENST00000615732 SP2Q02086 613 aa12.09□□□□□ -0.47
COL4A1-205ENST00000615732 SNW1Q13573 536 aaKnown RBP12.09□□□□□ -0.47
COL4A1-205ENST00000615732 EARS2Q5JPH6 523 aaKnown RBP12.09□□□□□ -0.47
COL4A1-205ENST00000615732 TMEM31Q5JXX7 168 aa12.09□□□□□ -0.47
COL4A1-205ENST00000615732 CELF3Q5SZQ8 465 aaKnown RBP12.09□□□□□ -0.47
COL4A1-205ENST00000615732 TRAF7Q6Q0C0 670 aa12.09□□□□□ -0.47
COL4A1-205ENST00000615732 CLIC6Q96NY7 704 aa12.09□□□□□ -0.47
COL4A1-205ENST00000615732 CD320Q9NPF0 282 aa12.09□□□□□ -0.47
COL4A1-205ENST00000615732 FBXO2Q9UK22 296 aaPredicted RBP12.09□□□□□ -0.47
COL4A1-205ENST00000615732 HCN4Q9Y3Q4 1203 aa12.09□□□□□ -0.47
COL4A1-205ENST00000615732 SRPRBQ9Y5M8 271 aaKnown RBP12.09□□□□□ -0.47
COL4A1-205ENST00000615732 PNMA6FA0A0J9YX94 578 aa12.08□□□□□ -0.48
COL4A1-205ENST00000615732 ESYT2A0FGR8 921 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms