RNA–Protein interactions for RNA: ENST00000615665.4

SSBP2-220, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 5 BASIC

Gene SSBP2, Length 4,465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-220ENST00000615665 B4GALNT4Q76KP1 1039 aa15.27■□□□□ 0.04
SSBP2-220ENST00000615665 FEM1BQ9UK73 627 aa15.27■□□□□ 0.04
SSBP2-220ENST00000615665 CEP83Q9Y592 693 aa15.27■□□□□ 0.04
SSBP2-220ENST00000615665 DLATP10515 647 aaKnown RBP15.27■□□□□ 0.04
SSBP2-220ENST00000615665 HSPA1LP34931 641 aa15.27■□□□□ 0.04
SSBP2-220ENST00000615665 PRKG1Q13976 671 aa15.27■□□□□ 0.04
SSBP2-220ENST00000615665 EDRF1Q3B7T1 1238 aa15.27■□□□□ 0.04
SSBP2-220ENST00000615665 HOOK3Q86VS8 718 aa15.27■□□□□ 0.04
SSBP2-220ENST00000615665 BANK1Q8NDB2 785 aa15.27■□□□□ 0.04
SSBP2-220ENST00000615665 KCNG1Q9UIX4 513 aa15.27■□□□□ 0.04
SSBP2-220ENST00000615665 PRR12Q9ULL5 1215 aa15.27■□□□□ 0.04
SSBP2-220ENST00000615665 TARSL2A2RTX5 802 aaKnown RBP15.27■□□□□ 0.03
SSBP2-220ENST00000615665 HOXA10P31260 410 aaPredicted RBP15.27■□□□□ 0.03
SSBP2-220ENST00000615665 FIGNQ5HY92 759 aa15.27■□□□□ 0.03
SSBP2-220ENST00000615665 SLC17A8Q8NDX2 589 aa15.27■□□□□ 0.03
SSBP2-220ENST00000615665 POMGNT1Q8WZA1 660 aa15.27■□□□□ 0.03
SSBP2-220ENST00000615665 ZDHHC15Q96MV8 337 aa15.27■□□□□ 0.03
SSBP2-220ENST00000615665 DDX4Q9NQI0 724 aaKnown RBP15.27■□□□□ 0.03
SSBP2-220ENST00000615665 SEL1LQ9UBV2 794 aa15.27■□□□□ 0.03
SSBP2-220ENST00000615665 SERPINA10Q9UK55 444 aa15.27■□□□□ 0.03
SSBP2-220ENST00000615665 DNAJC12Q9UKB3 198 aa15.27■□□□□ 0.03
SSBP2-220ENST00000615665 GAKO14976 1311 aa15.27■□□□□ 0.03
SSBP2-220ENST00000615665 ABCB11O95342 1321 aa15.27■□□□□ 0.03
SSBP2-220ENST00000615665 SHMT1P34896 483 aa15.27■□□□□ 0.03
SSBP2-220ENST00000615665 ATP1A2P50993 1020 aa15.27■□□□□ 0.03
SSBP2-220ENST00000615665 PDE6CP51160 858 aa15.27■□□□□ 0.03
SSBP2-220ENST00000615665 GLE1Q53GS7 698 aaKnown RBP15.27■□□□□ 0.03
SSBP2-220ENST00000615665 KIAA0895Q8NCT3 520 aa15.27■□□□□ 0.03
SSBP2-220ENST00000615665 DUSP9Q99956 384 aaKnown RBP15.27■□□□□ 0.03
SSBP2-220ENST00000615665 HSD3B7Q9H2F3 369 aa15.27■□□□□ 0.03
SSBP2-220ENST00000615665 UBE2TQ9NPD8 197 aaPredicted RBP15.27■□□□□ 0.03
SSBP2-220ENST00000615665 PITPNM2Q9BZ72 1349 aa15.27■□□□□ 0.03
SSBP2-220ENST00000615665 POLRMTO00411 1230 aaKnown RBP15.26■□□□□ 0.03
SSBP2-220ENST00000615665 ALCAMQ13740 583 aa15.26■□□□□ 0.03
SSBP2-220ENST00000615665 SPATA4Q8NEY3 305 aa15.26■□□□□ 0.03
SSBP2-220ENST00000615665 EHD4Q9H223 541 aa15.26■□□□□ 0.03
SSBP2-220ENST00000615665 PLEKP08567 350 aaPredicted RBP15.26■□□□□ 0.03
SSBP2-220ENST00000615665 RPA1P27694 616 aa15.26■□□□□ 0.03
SSBP2-220ENST00000615665 LIG4P49917 911 aa15.26■□□□□ 0.03
SSBP2-220ENST00000615665 HDLBPQ00341 1268 aaKnown RBP15.26■□□□□ 0.03
SSBP2-220ENST00000615665 PLCB3Q01970 1234 aa15.26■□□□□ 0.03
SSBP2-220ENST00000615665 CERKQ8TCT0 537 aa15.26■□□□□ 0.03
SSBP2-220ENST00000615665 IPO5O00410 1097 aaKnown RBP15.26■□□□□ 0.03
SSBP2-220ENST00000615665 SORBS3O60504 671 aa15.26■□□□□ 0.03
SSBP2-220ENST00000615665 TM4SF1P30408 202 aa15.26■□□□□ 0.03
SSBP2-220ENST00000615665 MXI1P50539 228 aa15.26■□□□□ 0.03
SSBP2-220ENST00000615665 MFAP3P55082 362 aa15.26■□□□□ 0.03
SSBP2-220ENST00000615665 DDR1Q08345 913 aa15.26■□□□□ 0.03
SSBP2-220ENST00000615665 CEP55Q53EZ4 464 aa15.26■□□□□ 0.03
SSBP2-220ENST00000615665 KCTD16Q68DU8 428 aa15.26■□□□□ 0.03
SSBP2-220ENST00000615665 PADI6Q6TGC4 694 aa15.26■□□□□ 0.03
SSBP2-220ENST00000615665 CEP57Q86XR8 500 aa15.26■□□□□ 0.03
SSBP2-220ENST00000615665 ATP6V0A1Q93050 837 aa15.26■□□□□ 0.03
SSBP2-220ENST00000615665 NSRP1Q9H0G5 558 aaKnown RBP15.26■□□□□ 0.03
SSBP2-220ENST00000615665 TUFT1Q9NNX1 390 aa15.26■□□□□ 0.03
SSBP2-220ENST00000615665 C1orf112Q9NSG2 853 aa15.26■□□□□ 0.03
SSBP2-220ENST00000615665 ASIC3Q9UHC3 531 aa15.26■□□□□ 0.03
SSBP2-220ENST00000615665 FHOD1Q9Y613 1164 aa15.26■□□□□ 0.03
SSBP2-220ENST00000615665 IRX3P78415 501 aaPredicted RBP15.25■□□□□ 0.03
SSBP2-220ENST00000615665 DEPTORQ8TB45 409 aa15.25■□□□□ 0.03
SSBP2-220ENST00000615665 PNMA5Q96PV4 448 aa15.25■□□□□ 0.03
SSBP2-220ENST00000615665 HNRNPDLO14979 420 aaKnown RBP15.25■□□□□ 0.03
SSBP2-220ENST00000615665 CYP11B2P19099 503 aa15.25■□□□□ 0.03
SSBP2-220ENST00000615665 SLC18A3Q16572 532 aa15.25■□□□□ 0.03
SSBP2-220ENST00000615665 CCDC121Q6ZUS5 278 aa15.25■□□□□ 0.03
SSBP2-220ENST00000615665 NT5C1BQ96P26 610 aa15.25■□□□□ 0.03
SSBP2-220ENST00000615665 NFU1Q9UMS0 254 aa15.25■□□□□ 0.03
SSBP2-220ENST00000615665 NUP188Q5SRE5 1749 aa15.25■□□□□ 0.03
SSBP2-220ENST00000615665 H0YCG3 227 aa15.25■□□□□ 0.03
SSBP2-220ENST00000615665 KIF4AO95239 1232 aa15.25■□□□□ 0.03
SSBP2-220ENST00000615665 HERVK_113P62684 666 aa15.25■□□□□ 0.03
SSBP2-220ENST00000615665 SF3A3Q12874 501 aaKnown RBP eCLIP15.25■□□□□ 0.03
SSBP2-220ENST00000615665 MESDQ14696 234 aa15.25■□□□□ 0.03
SSBP2-220ENST00000615665 RSRC2Q7L4I2 434 aaKnown RBP15.25■□□□□ 0.03
SSBP2-220ENST00000615665 CATSPER3Q86XQ3 398 aa15.25■□□□□ 0.03
SSBP2-220ENST00000615665 NEK9Q8TD19 979 aa15.25■□□□□ 0.03
SSBP2-220ENST00000615665 LXNQ9BS40 222 aa15.25■□□□□ 0.03
SSBP2-220ENST00000615665 TBC1D8O95759 1140 aa15.25■□□□□ 0.03
SSBP2-220ENST00000615665 NMT1P30419 496 aaKnown RBP15.25■□□□□ 0.03
SSBP2-220ENST00000615665 ALS2CLQ60I27 953 aa15.25■□□□□ 0.03
SSBP2-220ENST00000615665 C4orf32Q8N8J7 132 aa15.25■□□□□ 0.03
SSBP2-220ENST00000615665 BCAS4Q8TDM0 211 aa15.25■□□□□ 0.03
SSBP2-220ENST00000615665 KMT5AQ9NQR1 393 aa15.25■□□□□ 0.03
SSBP2-220ENST00000615665 KLRC4O43908 158 aa15.24■□□□□ 0.03
SSBP2-220ENST00000615665 CIAPIN1Q6FI81 312 aa15.24■□□□□ 0.03
SSBP2-220ENST00000615665 INTS8Q75QN2 995 aaKnown RBP15.24■□□□□ 0.03
SSBP2-220ENST00000615665 LDHDQ86WU2 507 aa15.24■□□□□ 0.03
SSBP2-220ENST00000615665 AP1M1Q9BXS5 423 aa15.24■□□□□ 0.03
SSBP2-220ENST00000615665 MYBP10242 640 aa15.24■□□□□ 0.03
SSBP2-220ENST00000615665 TRAPPC11Q7Z392 1133 aa15.24■□□□□ 0.03
SSBP2-220ENST00000615665 CEP170P1Q96L14 293 aa15.24■□□□□ 0.03
SSBP2-220ENST00000615665 LACRTQ9GZZ8 138 aa15.24■□□□□ 0.03
SSBP2-220ENST00000615665 ZNF277Q9NRM2 450 aaPredicted RBP15.24■□□□□ 0.03
SSBP2-220ENST00000615665 BCS1LQ9Y276 419 aa15.24■□□□□ 0.03
SSBP2-220ENST00000615665 MTMR1Q13613 665 aa15.24■□□□□ 0.03
SSBP2-220ENST00000615665 DENND2CQ68D51 928 aa15.24■□□□□ 0.03
SSBP2-220ENST00000615665 ZNF365Q70YC5 407 aa15.24■□□□□ 0.03
SSBP2-220ENST00000615665 COL23A1Q86Y22 540 aaPredicted RBP15.24■□□□□ 0.03
SSBP2-220ENST00000615665 TMEM139Q8IV31 216 aa15.24■□□□□ 0.03
SSBP2-220ENST00000615665 WHAMMQ8TF30 809 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms