RNA–Protein interactions for RNA: ENST00000613788.1

CD48-203, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-203ENST00000613788 TUT1Q9H6E5 874 aaKnown RBP16.45■□□□□ 0.22
CD48-203ENST00000613788 DDX19AQ9NUU7 478 aaKnown RBP16.45■□□□□ 0.22
CD48-203ENST00000613788 OGDHLQ9ULD0 1010 aa16.45■□□□□ 0.22
CD48-203ENST00000613788 HPSEQ9Y251 543 aa16.45■□□□□ 0.22
CD48-203ENST00000613788 MOXD2PA6NHM9 499 aa16.44■□□□□ 0.22
CD48-203ENST00000613788 KBTBD13C9JR72 458 aa16.44■□□□□ 0.22
CD48-203ENST00000613788 POLR2DO15514 142 aaKnown RBP16.44■□□□□ 0.22
CD48-203ENST00000613788 CABYRO75952 493 aa16.44■□□□□ 0.22
CD48-203ENST00000613788 TFRCP02786 760 aaKnown RBP16.44■□□□□ 0.22
CD48-203ENST00000613788 ASGR1P07306 291 aa16.44■□□□□ 0.22
CD48-203ENST00000613788 ZNF286BP0CG31 522 aa16.44■□□□□ 0.22
CD48-203ENST00000613788 PLCG1P19174 1290 aa16.44■□□□□ 0.22
CD48-203ENST00000613788 SYKP43405 635 aa16.44■□□□□ 0.22
CD48-203ENST00000613788 NDUFA8P51970 172 aa16.44■□□□□ 0.22
CD48-203ENST00000613788 ECM1Q16610 540 aa16.44■□□□□ 0.22
CD48-203ENST00000613788 TMEM119Q4V9L6 283 aa16.44■□□□□ 0.22
CD48-203ENST00000613788 XKR3Q5GH77 459 aa16.44■□□□□ 0.22
CD48-203ENST00000613788 CCSAPQ6IQ19 270 aaPredicted RBP16.44■□□□□ 0.22
CD48-203ENST00000613788 POTEGQ6S5H5 508 aa16.44■□□□□ 0.22
CD48-203ENST00000613788 U2AF1L4Q8WU68 220 aaKnown RBP16.44■□□□□ 0.22
CD48-203ENST00000613788 PNMA5Q96PV4 448 aa16.44■□□□□ 0.22
CD48-203ENST00000613788 PLIN2Q99541 437 aa16.44■□□□□ 0.22
CD48-203ENST00000613788 ZNF862O60290 1169 aa16.43■□□□□ 0.22
CD48-203ENST00000613788 F2P00734 622 aa16.43■□□□□ 0.22
CD48-203ENST00000613788 YWHABP31946 246 aaKnown RBP16.43■□□□□ 0.22
CD48-203ENST00000613788 STAT6P42226 847 aa16.43■□□□□ 0.22
CD48-203ENST00000613788 PRKCEQ02156 737 aa16.43■□□□□ 0.22
CD48-203ENST00000613788 FAM160A1Q05DH4 1040 aa16.43■□□□□ 0.22
CD48-203ENST00000613788 TRIM50Q86XT4 487 aa16.43■□□□□ 0.22
CD48-203ENST00000613788 BBXQ8WY36 941 aaPredicted RBP16.43■□□□□ 0.22
CD48-203ENST00000613788 CRISPLD2Q9H0B8 497 aa16.43■□□□□ 0.22
CD48-203ENST00000613788 CUEDC2Q9H467 287 aa16.43■□□□□ 0.22
CD48-203ENST00000613788 GOLPH3LQ9H4A5 285 aa16.43■□□□□ 0.22
CD48-203ENST00000613788 ANKEF1Q9NU02 776 aa16.43■□□□□ 0.22
CD48-203ENST00000613788 WRAP73Q9P2S5 460 aaPredicted RBP16.43■□□□□ 0.22
CD48-203ENST00000613788 STK17AQ9UEE5 414 aa16.43■□□□□ 0.22
CD48-203ENST00000613788 USP25Q9UHP3 1055 aa16.43■□□□□ 0.22
CD48-203ENST00000613788 DNM1LO00429 736 aa16.42■□□□□ 0.22
CD48-203ENST00000613788 HBP1O60381 514 aa16.42■□□□□ 0.22
CD48-203ENST00000613788 ZNF202O95125 648 aa16.42■□□□□ 0.22
CD48-203ENST00000613788 OATP04181 439 aa16.42■□□□□ 0.22
CD48-203ENST00000613788 ATP4AP20648 1035 aa16.42■□□□□ 0.22
CD48-203ENST00000613788 MARK3P27448 753 aa16.42■□□□□ 0.22
CD48-203ENST00000613788 GJA8P48165 433 aa16.42■□□□□ 0.22
CD48-203ENST00000613788 ACLYP53396 1101 aa16.42■□□□□ 0.22
CD48-203ENST00000613788 CXCL17Q6UXB2 119 aa16.42■□□□□ 0.22
CD48-203ENST00000613788 TRMT1LQ7Z2T5 733 aaKnown RBP16.42■□□□□ 0.22
CD48-203ENST00000613788 PIGOQ8TEQ8 1089 aa16.42■□□□□ 0.22
CD48-203ENST00000613788 ATP8B4Q8TF62 1192 aa16.42■□□□□ 0.22
CD48-203ENST00000613788 DHX58Q96C10 678 aa16.42■□□□□ 0.22
CD48-203ENST00000613788 CCDC43Q96MW1 224 aaKnown RBP16.42■□□□□ 0.22
CD48-203ENST00000613788 A0A087X0B3 334 aa16.41■□□□□ 0.22
CD48-203ENST00000613788 E9PMD0 336 aa16.41■□□□□ 0.22
CD48-203ENST00000613788 EYA4O95677 639 aa16.41■□□□□ 0.22
CD48-203ENST00000613788 PSEN2P49810 448 aa16.41■□□□□ 0.22
CD48-203ENST00000613788 PSMC6P62333 389 aa16.41■□□□□ 0.22
CD48-203ENST00000613788 MFSD10Q14728 455 aa16.41■□□□□ 0.22
CD48-203ENST00000613788 PLCB4Q15147 1175 aa16.41■□□□□ 0.22
CD48-203ENST00000613788 KIAA0753Q2KHM9 967 aa16.41■□□□□ 0.22
CD48-203ENST00000613788 CEP57L1Q8IYX8 460 aa16.41■□□□□ 0.22
CD48-203ENST00000613788 FMR1NBQ8N0W7 255 aaPredicted RBP16.41■□□□□ 0.22
CD48-203ENST00000613788 ENGASEQ8NFI3 743 aa16.41■□□□□ 0.22
CD48-203ENST00000613788 KAT2BQ92831 832 aa16.41■□□□□ 0.22
CD48-203ENST00000613788 CCDC34Q96HJ3 373 aa16.41■□□□□ 0.22
CD48-203ENST00000613788 GLT1D1Q96MS3 346 aa16.41■□□□□ 0.22
CD48-203ENST00000613788 NIFKQ9BYG3 293 aaKnown RBP16.41■□□□□ 0.22
CD48-203ENST00000613788 RNPEPQ9H4A4 650 aa16.41■□□□□ 0.22
CD48-203ENST00000613788 DBR1Q9UK59 544 aaKnown RBP16.41■□□□□ 0.22
CD48-203ENST00000613788 TRPC6Q9Y210 931 aa16.41■□□□□ 0.22
CD48-203ENST00000613788 HAS3O00219 553 aa16.4■□□□□ 0.22
CD48-203ENST00000613788 STBD1O95210 358 aa16.4■□□□□ 0.22
CD48-203ENST00000613788 MBD3O95983 291 aa16.4■□□□□ 0.22
CD48-203ENST00000613788 LIG1P18858 919 aa16.4■□□□□ 0.22
CD48-203ENST00000613788 SNW1Q13573 536 aaKnown RBP16.4■□□□□ 0.22
CD48-203ENST00000613788 E2F4Q16254 413 aa16.4■□□□□ 0.22
CD48-203ENST00000613788 XKR9Q5GH70 373 aa16.4■□□□□ 0.22
CD48-203ENST00000613788 ANO5Q75V66 913 aa16.4■□□□□ 0.22
CD48-203ENST00000613788 ANKLE1Q8NAG6 615 aa16.4■□□□□ 0.22
CD48-203ENST00000613788 LARP4BQ92615 738 aaKnown RBP16.4■□□□□ 0.22
CD48-203ENST00000613788 RAD54LQ92698 747 aa16.4■□□□□ 0.22
CD48-203ENST00000613788 VTI1AQ96AJ9 217 aa16.4■□□□□ 0.22
CD48-203ENST00000613788 MAGEF1Q9HAY2 307 aa16.4■□□□□ 0.22
CD48-203ENST00000613788 SEPT9Q9UHD8 586 aaPredicted RBP16.4■□□□□ 0.22
CD48-203ENST00000613788 PHF24Q9UPV7 400 aa16.4■□□□□ 0.22
CD48-203ENST00000613788 PPME1Q9Y570 386 aa16.4■□□□□ 0.22
CD48-203ENST00000613788 A0A087WWV3 80 aa16.4■□□□□ 0.22
CD48-203ENST00000613788 ARHGEF35A5YM69 484 aa16.4■□□□□ 0.22
CD48-203ENST00000613788 ZBTB39O15060 712 aa16.4■□□□□ 0.22
CD48-203ENST00000613788 KINO60870 393 aaKnown RBP16.4■□□□□ 0.22
CD48-203ENST00000613788 NR1I2O75469 434 aa16.4■□□□□ 0.22
CD48-203ENST00000613788 SLFN14P0C7P3 912 aa16.4■□□□□ 0.22
CD48-203ENST00000613788 CHMP4BP1P59074 171 aa16.4■□□□□ 0.22
CD48-203ENST00000613788 NAALADL2Q58DX5 795 aa16.4■□□□□ 0.22
CD48-203ENST00000613788 ZNF484Q5JVG2 852 aa16.4■□□□□ 0.22
CD48-203ENST00000613788 KANK3Q6NY19 840 aa16.4■□□□□ 0.22
CD48-203ENST00000613788 SV2BQ7L1I2 683 aa16.4■□□□□ 0.22
CD48-203ENST00000613788 KCNK18Q7Z418 384 aa16.4■□□□□ 0.22
CD48-203ENST00000613788 SYT2Q8N9I0 419 aaPredicted RBP16.4■□□□□ 0.22
CD48-203ENST00000613788 CNNM3Q8NE01 707 aa16.4■□□□□ 0.22
CD48-203ENST00000613788 CEP170P1Q96L14 293 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 286.4 ms